Contig 000308:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002M17Sequence483003291 (19)gb|KJB84163.1|5e-55hypothetical protein B456_N007500 [Gossypium raimondii]714000308 (11)gb|AFR66645.1|1e-107MIP1.1a [Nicotiana benthamiana]
JMFF004F05Sequence626003291 (19)gb|KJB84163.1|6e-69hypothetical protein B456_N007500 [Gossypium raimondii]788000308 (11)gb|AFR66645.1|6e-106MIP1.1a [Nicotiana benthamiana]
JMFF004L24Sequence787000308 (11)ref|XP_006345881.1|6e-110PREDICTED: dnaJ protein homolog [Solanum tuberosum] gb|ABB16989.1| DnaJ-like pro
JMFF013C04Sequence573003291 (19)gb|KJB84163.1|1e-70hypothetical protein B456_N007500 [Gossypium raimondii]784000308 (11)ref|XP_006345881.1|1e-119PREDICTED: dnaJ protein homolog [Solanum tuberosum] gb|ABB16989.1| DnaJ-like pro
JMFF015A24Sequence482003291 (19)gb|KJB84163.1|3e-51hypothetical protein B456_N007500 [Gossypium raimondii]711000308 (11)gb|AFR66645.1|3e-108MIP1.1a [Nicotiana benthamiana]
JMFF027P04Sequence571003291 (19)gb|KJB84163.1|2e-71hypothetical protein B456_N007500 [Gossypium raimondii]744000308 (11)gb|AFR66645.1|9e-107MIP1.1a [Nicotiana benthamiana]
JMFF035F19Sequence595003291 (19)gb|KJB84163.1|4e-69hypothetical protein B456_N007500 [Gossypium raimondii]705000308 (11)gb|AFR66645.1|6e-107MIP1.1a [Nicotiana benthamiana]
JMFF038M18Sequence497003291 (19)gb|KJB84163.1|2e-49hypothetical protein B456_N007500 [Gossypium raimondii]704000308 (11)gb|AFR66645.1|4e-109MIP1.1a [Nicotiana benthamiana]
JMFF042H12Sequence661003291 (19)gb|KJB84163.1|3e-72hypothetical protein B456_N007500 [Gossypium raimondii]445000308 (11)gb|KHG16063.1|8e-36DnaJ protein [Gossypium arboreum]
JMFF049G23Sequence457003291 (19)gb|KJB84163.1|1e-50hypothetical protein B456_N007500 [Gossypium raimondii]277000308 (11)
JMFN005K23Sequence622000308 (11)gb|AAN87055.1|3e-39tuber-induction protein [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF013C04+                                                      TATTAATGAGAAAGAT
                      ____________________________________________________________
consensus                                                         TATTAATGAGAAAGAT
 
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rJMFF013C04+          AGGTGCGGCCAGTGTAAGGGTGAGAAGNTTGTGCAAGAGAAGAAGGTGTTGGAAGTCNTT
rJMFF038M18+                                                                    TT
rJMFF027P04+                                   AGGTTGTGCAAGAGAAGAAGGTGTTGGAAGTCCTT
rJMFF004F05+                         AAGGGTGAGAAGGTTGTGCAAGAGAAGAAGGTGTTGGAAGTCCTT
rJMFF004L24+                         AAGGGTGAGAAGGTTGTGCAAGAGAAGAAGGTGTTGGAAGTCCTT
rJMFF002M17+                                                                     T
                      ____________________________________________________________
consensus             AGGTGCGGCCAGTGTAAGGGTGAGAAGGTTGTGCAAGAGAAGAAGGTGTTGGAAGTCCTT
 
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rJMFF013C04+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF038M18+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF027P04+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF004F05+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF004L24+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF015A24+            TGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF002M17+          GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
rJMFF035F19+                  GGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
                      ____________________________________________________________
consensus             GTTGAGAAGGGAATGCAGAATGGTCAAAAGATTACATTCCCCGGAGAGGCTGATGAAGCT
 
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rJMFF013C04+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCNTAAGTTC
rJMFF038M18+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
rJMFF027P04+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
rJMFF004F05+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
rJMFF004L24+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
rJMFF015A24+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
rJMFF002M17+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCTTAAGTTC
rJMFF035F19+          CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
                      ____________________________________________________________
consensus             CCGGACACTATCACAGGAGACATTGTGTTTGTCTTGCAACAAAGGGAACACCCTAAGTTC
 
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rJMFF013C04+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF038M18+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF027P04+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF004F05+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAGCCCTAACAGAAGCCCTTTGC
rJMFF004L24+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF015A24+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF002M17+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
rJMFF035F19+          AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
                      ____________________________________________________________
consensus             AAGCGAAAGGGAGATGACCTTTTCGTGGAGCACACCTTAACCCTAACAGAAGCCCTTTGC
 
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rJMFF013C04+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF038M18+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF027P04+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF004F05+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF004L24+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF015A24+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF002M17+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
rJMFF035F19+          GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
                      ____________________________________________________________
consensus             GGTTTCCAGTTTATCTTAACACACCTAGACAATAGGCAGCTCCTCATCAAATCACAACCC
 
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rJMFF013C04+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF038M18+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF027P04+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF004F05+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF004L24+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF015A24+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF002M17+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF035F19+          GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
rJMFF042H12+                                                     AAGGAATGCCCATGTAT
JMFN005K23+                                                 CGACGAAGGAATGCCCATGTAT
                      ____________________________________________________________
consensus             GGAGAAGTTGTTAAGCCTGATCAATTCAAGGCCATAAACGACGAAGGAATGCCCATGTAT
 
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rJMFF013C04+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF038M18+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF027P04+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF004F05+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF004L24+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF015A24+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF002M17+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF035F19+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
rJMFF042H12+          CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
JMFN005K23+           CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
                      ____________________________________________________________
consensus             CAAAGGCCATTCATGAGAGGAAAGCTGTACATTCATTTCACAGTTGATTTTCCAGAGTCA
 
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rJMFF013C04+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF038M18+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF027P04+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF004F05+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF004L24+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF015A24+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF002M17+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF035F19+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
rJMFF042H12+          TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCTTAAGACCACAACAGGA
JMFN005K23+           TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
                      ____________________________________________________________
consensus             TTATCCCCTGAGCAATGCAAGGGTCTCGAGGCTGTGCTGCCGCCTAAGCCCACAACAGGA
 
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rJMFF013C04+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF038M18+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF027P04+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF004F05+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF004L24+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF015A24+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF002M17+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF035F19+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
rJMFF042H12+          ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCCCCTTGCACGATGTCAATATCGAA
JMFN005K23+           ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
                      ____________________________________________________________
consensus             ATCACCGACATGGAACTGGATGAGTGCGAGGAAACCACCTTGCACGATGTCAATATCGAA
 
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rJMFF013C04+          GAGGAGATGCGTAGGAAGCAGCAGCAGGAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF038M18+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF027P04+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF004F05+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF004L24+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF015A24+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF002M17+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF035F19+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF042H12+          GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
rJMFF049G23+             GAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
JMFN005K23+           GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
                      ____________________________________________________________
consensus             GAGGAGATGCGTAGGAAGCAGCAGCAGCAGGCACAGGAAGCATATGATGAAGACGATGAT
 
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rJMFF013C04+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF038M18+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF027P04+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF004F05+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF004L24+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF015A24+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF002M17+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF035F19+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF042H12+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
rJMFF049G23+          ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
JMFN005K23+           ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
                      ____________________________________________________________
consensus             ATGCATGGCGGGGCACAGAGAGTACAATGTGCCCAACAGTGAGTGATGAAAACAAGGTGG
 
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rJMFF013C04+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF038M18+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF027P04+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF004F05+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF004L24+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF015A24+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF002M17+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF035F19+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
rJMFF042H12+          AGACAACTCATGGGGTGACCTTTCCTTATCACAATTAGGATTTACAGATTGATAGTTAAT
rJMFF049G23+          AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
JMFN005K23+           AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
                      ____________________________________________________________
consensus             AGACAACTCATGGGGTGACCTTTCCTTATCACAACTAGGATTTACAGATTGATAGTTAAT
 
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rJMFF013C04+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATA            
rJMFF038M18+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTG                  
rJMFF027P04+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAA           
rJMFF004F05+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAA          
rJMFF004L24+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATAT       
rJMFF015A24+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATAT       
rJMFF002M17+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATAT       
rJMFF035F19+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATAT       
rJMFF042H12+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATATTAAACTT
rJMFF049G23+          TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATATTAAACTT
JMFN005K23+           TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATATTAAACTT
                      ____________________________________________________________
consensus             TCCTGAATGGTTTCTGAATTTTTGTGTGTAATGCAAAACTTGGTTATAAATATTAAACTT
 
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rJMFF042H12+          TGATGGTT                                                    
rJMFF049G23+          TGATGGTTTCT                                                 
JMFN005K23+           TGATGGTTTCTTCATATCTTCCTTGTTGTGGAAGCTGCCTGCACAAGTGCCAAATCAGAG
                      ____________________________________________________________
consensus             TGATGGTTTCTTCATATCTTCCTTGTTGTGGAAGCTGCCTGCACAAGTGCCAAATCAGAG
 
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JMFN005K23+           ATGTTAGGTGAATGAAGTCAACTCAACCATTCCCCCCAGCAAGCTTGTAAAGCACTCTAT
                      ____________________________________________________________
consensus             ATGTTAGGTGAATGAAGTCAACTCAACCATTCCCCCCAGCAAGCTTGTAAAGCACTCTAT
 
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JMFN005K23+           CTTTACAAATTAAATCACTTTAAATXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             CTTTACAAATTAAATCACTTTAAATNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC