Contig 000305:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN004H05Sequence594000305 (3)gb|KDP44403.1|4e-43hypothetical protein JCGZ_19418 [Jatropha curcas]
JMFS067E06Sequence508000305 (3)gb|KDP44403.1|2e-26hypothetical protein JCGZ_19418 [Jatropha curcas]
JMFS078F05Sequence508000305 (3)gb|KDP44403.1|2e-26hypothetical protein JCGZ_19418 [Jatropha curcas]

Alignment

This contig is upended


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JMFN004H05-                 CCGGATGGGGAATTCTTTCTATTGCCGTGGCGTGGAAACCTCTAGTCAAGAAAA
                      ____________________________________________________________
consensus                   CCGGATGGGGAATTCTTTCTATTGCCGTGGCGTGGAAACCTCTAGTCAAGAAAA
 
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JMFS067E06+                                    TGTTGCGCGGTTATATGATGCTGGGATTGGTATGC
JMFS078F05+                                    TGTTGCGCGGTTATATGATGCTGGGATTGGTATGC
JMFN004H05-           TGGGATTGTGGAAATCAGTTCGTTCTGTTGCGCGGTTATATGATGCTGGGATTGGTATGC
                      ____________________________________________________________
consensus             TGGGATTGTGGAAATCAGTTCGTTCTGTTGCGCGGTTATATGATGCTGGGATTGGTATGC
 
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JMFS067E06+           TCATCTTCATCCCCATTGCATTCCTCTCCTGGTTCCCATTTGTTTCAACGTTTCAAACCC
JMFS078F05+           TCATCTTCATCCCCATTGCATTCCTCTCCTGGTTCCCATTTGTTTCAACGTTTCAAACCC
JMFN004H05-           TCATCTTCATCCCCATTGCATTCCTCTCCTGGTTCCCATTTGTTTCAACGTTTCAAACCC
                      ____________________________________________________________
consensus             TCATCTTCATCCCCATTGCATTCCTCTCCTGGTTCCCATTTGTTTCAACGTTTCAAACCC
 
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JMFS067E06+           GGCTTATGTTCAACCAAGCGTTCAGTCGAGGGCTGGAAATCTCTCTTATCCTTGCTGGGA
JMFS078F05+           GGCTTATGTTCAACCAAGCGTTCAGTCGAGGGCTGGAAATCTCTCTTATCCTTGCTGGGA
JMFN004H05-           GGCTTATGTTCAACCAAGCGTTCAGTCGAGGGCTGGAAATCTCTCTTATCCTTGCTGGGA
                      ____________________________________________________________
consensus             GGCTTATGTTCAACCAAGCGTTCAGTCGAGGGCTGGAAATCTCTCTTATCCTTGCTGGGA
 
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JMFS067E06+           ATAATCCCAATACTGGTGTGTGATTCACACGTAGGACACGCTTCATTCTCGAGCATTTAG
JMFS078F05+           ATAATCCCAATACTGGTGTGTGATTCACACGTAGGACACGCTTCATTCTCGAGCATTTAG
JMFN004H05-           ATAATCCCAATACTGGTGTGTGATTCACACGTAGGACACGCTTCATTCTCGAGCATTTAG
                      ____________________________________________________________
consensus             ATAATCCCAATACTGGTGTGTGATTCACACGTAGGACACGCTTCATTCTCGAGCATTTAG
 
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JMFS067E06+           GGTGTTCCGTTTTCTGAATTTGTAGAATGCACTCTTTGAGGCTTTGCCAGATGATGAATT
JMFS078F05+           GGTGTTCCGTTTTCTGAATTTGTAGAATGCACTCTTTGAGGCTTTGCCAGATGATGAATT
JMFN004H05-           GGTGTTCCGTTTTTTGAATTTGTAGAATGCACTCTTTGAGGCTTTGCCAGATGATGAATT
                      ____________________________________________________________
consensus             GGTGTTCCGTTTTCTGAATTTGTAGAATGCACTCTTTGAGGCTTTGCCAGATGATGAATT
 
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JMFS067E06+           CCTAAGTTACCATTTCTATCATTGATATTACATTTTAATTAACTAGTCTTGAGAGTGCTA
JMFS078F05+           CCTAAGTTACCATTTCTATCATTGATATTACATTTTAATTAACTAGTCTTGAGAGTGCTA
JMFN004H05-           CCTAAGTTACCATTTCTATCATTGATATTACATTTTAATTAACTAGTCTTGAGAGTGCTA
                      ____________________________________________________________
consensus             CCTAAGTTACCATTTCTATCATTGATATTACATTTTAATTAACTAGTCTTGAGAGTGCTA
 
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JMFS067E06+           CATTAATAGAGAGCTTGAGAGCTTCCCCCACCCCCTGTATATATTCTTGGGCTGACTGGT
JMFS078F05+           CATTAATAGAGAGCTTGAGAGCTTCCCCCACCCCCTGTATATATTCTTGGGCTGACTGGT
JMFN004H05-           CATTAATAGAGAGCTTGAGAGCTTCCCCCACCCCCTGTATATATTCTTGGGCTGACTGGT
                      ____________________________________________________________
consensus             CATTAATAGAGAGCTTGAGAGCTTCCCCCACCCCCTGTATATATTCTTGGGCTGACTGGT
 
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JMFS067E06+           TTGAATACCTAGGCTTTTCACTGTCGTTCTATAGTTCATTAAAATGATTTTGATGTATTT
JMFS078F05+           TTGAATACCTAGGCTTTTCACTGTCGTTCTATAGTTCATTAAAATGATTTTGATGTATTT
JMFN004H05-           TTGAATACCTAGGCTTTTCACTGTCGTTCTATAGTTCATTAAAATGATTTTGATGTATTT
                      ____________________________________________________________
consensus             TTGAATACCTAGGCTTTTCACTGTCGTTCTATAGTTCATTAAAATGATTTTGATGTATTT
 
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JMFS067E06+           TTCACATCAGTCTTAAGTGA                                        
JMFS078F05+           TTCACATCAGTCTTAAGTGA                                        
JMFN004H05-           TTCACATCAGTCTTAAGTGACTTTATTTGCACAAGGCTACTGGGACCAAATTTTTGGTTC
                      ____________________________________________________________
consensus             TTCACATCAGTCTTAAGTGACTTTATTTGCACAAGGCTACTGGGACCAAATTTTTGGTTC