Contig 000304:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN033D24+                                                    TATTGCTTCCATTCTGAAT
JMFN003M10+                                                   ATATTGCTTCCATTCTGAAT
                      ____________________________________________________________
consensus                                                     ATATTGCTTCCATTCTGAAT
 
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JMFN033D24+           AAAGTAATAAACACATTTAGATCTAAAAATGGCTGAATCTTGGTCTGCATTTNAAAAGGT
JMFN003M10+           AAAGTAATAAACACATTTAGATCTAAAAATGGCTGAATCTTGGTCTGCATTTTAAAAGGT
                      ____________________________________________________________
consensus             AAAGTAATAAACACATTTAGATCTAAAAATGGCTGAATCTTGGTCTGCATTTTAAAAGGT
 
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JMFN033D24+           TGACAAAGAAATACCAGAACATATGATATCGGAGAGGAAAGCTAGCTGCTTTTGAATAAA
JMFN003M10+           TGACAAAGAAATACCAGAACATATGATATCGGAGAGGAAAGCTAGCTGCTTTTGAATAAA
                      ____________________________________________________________
consensus             TGACAAAGAAATACCAGAACATATGATATCGGAGAGGAAAGCTAGCTGCTTTTGAATAAA
 
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JMFN033D24+           AAGCACTAATGCTTGAAGCAACTATTGATTGTTACTAGTGAGTGATCTTGTTTTCCCTGA
JMFN003M10+           AAGCACTAATGCTTGAAGCAACTATTGATTGTTACTAGTGAGTGATCTTGTTTTCCCTGA
                      ____________________________________________________________
consensus             AAGCACTAATGCTTGAAGCAACTATTGATTGTTACTAGTGAGTGATCTTGTTTTCCCTGA
 
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JMFN033D24+           AAGTAATTCAGATGATTCCCAAGCTGCTAACCAATTTGGGGAGACAATAAAGTCTCTATT
JMFN003M10+           AAGTAATTCAGATGATTCCCAAGCTGCTAACCAATTTGGGGAGACAATAAAGTCTCTATT
                      ____________________________________________________________
consensus             AAGTAATTCAGATGATTCCCAAGCTGCTAACCAATTTGGGGAGACAATAAAGTCTCTATT
 
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JMFN033D24+           TGTTCCGCTTTTTGGCCTGCTTTCCTTGGCCCTTCTTAGGTGGTCCCTTTCCACGACGCT
JMFN003M10+           TGTTCCGCTTTTTGGCCTGCTTTCCTTGGCCCTTCTTAGGTGGTCCCTTTCCACGACGCT
                      ____________________________________________________________
consensus             TGTTCCGCTTTTTGGCCTGCTTTCCTTGGCCCTTCTTAGGTGGTCCCTTTCCACGACGCT
 
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JMFN033D24+           TCAACATTTCTAGCTTGCTCAACCGCTCTTGTTCTTCTTGTGCCATGACAAGAGGATCAT
JMFN003M10+           TCAACATTTCTAGCTTGCTCAACCGCTCTTGTTCTTCTTGTGCCATGACAAGAGGATCAT
                      ____________________________________________________________
consensus             TCAACATTTCTAGCTTGCTCAACCGCTCTTGTTCTTCTTGTGCCATGACAAGAGGATCAT
 
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JMFN033D24+           CCTTTCTGATGTCAT----GTACCATTGCGCAACCTTGTCTCCAATCAACTTCTTCCGTA
JMFN003M10+           CCTTTCTGATGTCATGTGGGTACCATTGCGCAACCTTGTCTCCAATCAACTTCTTCCGTA
                      ____________________________________________________________
consensus             CCTTTCTGATGTCATGTGGGTACCATTGCGCAACCTTGTCTCCAATCAACTTCTTCCGTA
 
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JMFN033D24+           GAATTTTGTGAGCAGATCTCTCACCCGTGGGGTTAAGCACATGCCCAAAAATCCTTGCCC
JMFN003M10+           GAATTTTGTGAGCAGATCTCTCACCCGTGGGGTTAAGCACATGCCCAAAAATCCTTGCCC
                      ____________________________________________________________
consensus             GAATTTTGTGAGCAGATCTCTCACCCGTGGGGTTAAGCACATGCCCAAAAATCCTTGCCC
 
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JMFN033D24+           TTGCATTGGCCACCCCTTCCATGGCTACAGAGGCCACCAAGTTCCTCAGCCTCCCAGAGC
JMFN003M10+           TTGCATTGGCCACCCCTTCCATGGCTACAGAGGCCACCAAGTTCCTCAGCCTCCCAGAGC
                      ____________________________________________________________
consensus             TTGCATTGGCCACCCCTTCCATGGCTACAGAGGCCACCAAGTTCCTCAGCCTCCCAGAGC
 
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JMFN033D24+           TCATGTCTTCTTCCACTGCAGCTCCACACT                              
JMFN003M10+           TCATGTCTTCTTCCACTGCAGCTCCACACTTCTGAACTTACTTTTTCTTCATCTACAGAA
                      ____________________________________________________________
consensus             TCATGTCTTCTTCCACTGCAGCTCCACACTTCTGAACTTACTTTTTCTTCATCTACAGAA