Contig 000302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051O02Sequence637000302 (2)ref|XP_010463941.1|1e-55PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Camelina sativa]556005580 (2)ref|XP_008788272.1|1e-58PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Phoenix dactylifera]
JMSF048M15Sequence651000302 (2)ref|XP_006408175.1|2e-117hypothetical protein EUTSA_v10020864mg [Eutrema salsugineum] gb|ESQ49628.1| hypo699005580 (2)ref|XP_011074471.1|280PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Sesamum indicum]

Alignment

This contig is upended


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JMSF048M15+ CCTTCACCATGTTCT
                      ____________________________________________________________
consensus CCTTCACCATGTTCT
 
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JMSF048M15+ TGTAAAAAGCACNTCCGACATAATCGAAATCAGAGAAGATAAACGTCCTAGAAATGTCAA
                      ____________________________________________________________
consensus TGTAAAAAGCACNTCCGACATAATCGAAATCAGAGAAGATAAACGTCCTAGAAATGTCAA
 
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JMSF048M15+ AACCACAGGCGATAATGTCCTTGGCATTCTCCCGGGCCAGCCTTTGGCTCTCCTCTACCG
                      ____________________________________________________________
consensus AACCACAGGCGATAATGTCCTTGGCATTCTCCCGGGCCAGCCTTTGGCTCTCCTCTACCG
 
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JMSF048M15+ TCAGATTCTTCCACATACACTTCTCGTCATCGGTCAACTGAATTACAAGTGGCACCTTAA
                      ____________________________________________________________
consensus TCAGATTCTTCCACATACACTTCTCGTCATCGGTCAACTGAATTACAAGTGGCACCTTAA
 
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JMSF048M15+ ACGCATCCTGCAAGTACTTGGTGAACATGAATGGAATGAGATGACCCATATGCAAGGCTT
JMFF051O02+ AACATGAATGGAATGAGATGACCCATATGCAAGGCTT
                      ____________________________________________________________
consensus ACGCATCCTGCAAGTACTTGGTGAACATGAATGGAATGAGATGACCCATATGCAAGGCTT
 
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JMSF048M15+ CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCTCTTTCATAAGCATCCA
JMFF051O02+ CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCCCTTTCATAAGCATCCA
                      ____________________________________________________________
consensus CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCTCTTTCATAAGCATCCA
 
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JMSF048M15+ GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
JMFF051O02+ GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
                      ____________________________________________________________
consensus GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
 
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JMSF048M15+ GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
JMFF051O02+ GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
                      ____________________________________________________________
consensus GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
 
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JMSF048M15+ ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCGCCGTCCTTGGCTGATACTTCCCATG
JMFF051O02+ ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCACCGTCCTTGGCTGATACTTCCCATG
                      ____________________________________________________________
consensus ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCGCCGTCCTTGGCTGATACTTCCCATG
 
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JMSF048M15+ GGTTCACTACCTGTTCTTCGGCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
JMFF051O02+ GGTTCACTACCTGTTCTTCTTCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
                      ____________________________________________________________
consensus GGTTCACTACCTGTTCTTCTTCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
 
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JMSF048M15+ CCTTCTCC
JMFF051O02+ CCTTCTCCATTACTGTCTGTCGTTGAGTGTTATCGCCGATTCAGCTCTGCAGCTCTGCCG
                      ____________________________________________________________
consensus CCTTCTCCATTACTGTCTGTCGTTGAGTGTTATCGCCGATTCAGCTCTGCAGCTCTGCCG
 
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JMFF051O02+ GTGAGGTGACGGCTGAGGAAGTGAGGAGCGATGCAGCCAAGCAGAAGCCGAAGGGAGTAA
                      ____________________________________________________________
consensus GTGAGGTGACGGCTGAGGAAGTGAGGAGCGATGCAGCCAAGCAGAAGCCGAAGGGAGTAA
 
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JMFF051O02+ CCGCAGAGGCGCAGACCGCCTGACTGAGTGACCGGAGTGTCGGCTGTGTCGCACTGTCGC
                      ____________________________________________________________
consensus CCGCAGAGGCGCAGACCGCCTGACTGAGTGACCGGAGTGTCGGCTGTGTCGCACTGTCGC
 
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JMFF051O02+ CGAGGATGGGAGAAGATGAGTGGAAATCGTGGTCTACTGGTCTCGTCAGTCGTCACTCTC
                      ____________________________________________________________
consensus CGAGGATGGGAGAAGATGAGTGGAAATCGTGGTCTACTGGTCTCGTCAGTCGTCACTCTC
 
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JMFF051O02+ GTGGAGAAGACGAGATTCCAGACCGAATGGTTGAATGAACGAACAGACGATTAGGCATTT
                      ____________________________________________________________
consensus GTGGAGAAGACGAGATTCCAGACCGAATGGTTGAATGAACGAACAGACGATTAGGCATTT