Contig 000302:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051O02Sequence637000302 (2)ref|XP_010463941.1|1e-55PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Camelina sativa]556005580 (2)ref|XP_008788272.1|1e-58PREDICTED: tryptophan--tRNA ligase, cytoplasmic-like [Phoenix dactylifera]
JMSF048M15Sequence651000302 (2)ref|XP_006408175.1|2e-117hypothetical protein EUTSA_v10020864mg [Eutrema salsugineum] gb|ESQ49628.1| hypo699005580 (2)ref|XP_011074471.1|280PREDICTED: tryptophan--tRNA ligase, cytoplasmic [Sesamum indicum]

Alignment

This contig is upended


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JMSF048M15+                                                        CCTTCACCATGTTCT
                      ____________________________________________________________
consensus                                                          CCTTCACCATGTTCT
 
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JMSF048M15+           TGTAAAAAGCACNTCCGACATAATCGAAATCAGAGAAGATAAACGTCCTAGAAATGTCAA
                      ____________________________________________________________
consensus             TGTAAAAAGCACNTCCGACATAATCGAAATCAGAGAAGATAAACGTCCTAGAAATGTCAA
 
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JMSF048M15+           AACCACAGGCGATAATGTCCTTGGCATTCTCCCGGGCCAGCCTTTGGCTCTCCTCTACCG
                      ____________________________________________________________
consensus             AACCACAGGCGATAATGTCCTTGGCATTCTCCCGGGCCAGCCTTTGGCTCTCCTCTACCG
 
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JMSF048M15+           TCAGATTCTTCCACATACACTTCTCGTCATCGGTCAACTGAATTACAAGTGGCACCTTAA
                      ____________________________________________________________
consensus             TCAGATTCTTCCACATACACTTCTCGTCATCGGTCAACTGAATTACAAGTGGCACCTTAA
 
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JMSF048M15+           ACGCATCCTGCAAGTACTTGGTGAACATGAATGGAATGAGATGACCCATATGCAAGGCTT
JMFF051O02+                                  AACATGAATGGAATGAGATGACCCATATGCAAGGCTT
                      ____________________________________________________________
consensus             ACGCATCCTGCAAGTACTTGGTGAACATGAATGGAATGAGATGACCCATATGCAAGGCTT
 
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JMSF048M15+           CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCTCTTTCATAAGCATCCA
JMFF051O02+           CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCCCTTTCATAAGCATCCA
                      ____________________________________________________________
consensus             CCGAAGAAGGTCCACGGCCAGTATACAAGTAGAACTTATCCCCTCTTTCATAAGCATCCA
 
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JMSF048M15+           GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
JMFF051O02+           GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
                      ____________________________________________________________
consensus             GAATCTCACTGAAGTCGCGATGAGCGAAGAAGACGCCGCGGCGGAGGAAAACGTGGGGCT
 
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JMSF048M15+           GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
JMFF051O02+           GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
                      ____________________________________________________________
consensus             GGCGGCCGGTGAGTCGCTCCACGCGGTCAACGAGGGACTTGTCCAGCCGCTGGCAGCCGA
 
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JMSF048M15+           ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCGCCGTCCTTGGCTGATACTTCCCATG
JMFF051O02+           ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCACCGTCCTTGGCTGATACTTCCCATG
                      ____________________________________________________________
consensus             ACTTGTCAATCAACTTGTCGTAGTCGATTTTGCCGCCGTCCTTGGCTGATACTTCCCATG
 
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JMSF048M15+           GGTTCACTACCTGTTCTTCGGCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
JMFF051O02+           GGTTCACTACCTGTTCTTCTTCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
                      ____________________________________________________________
consensus             GGTTCACTACCTGTTCTTCTTCTTCTTGCTCTTTCTTTGAATCGTCCTGTGAGACACTCT
 
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JMSF048M15+           CCTTCTCC                                                    
JMFF051O02+           CCTTCTCCATTACTGTCTGTCGTTGAGTGTTATCGCCGATTCAGCTCTGCAGCTCTGCCG
                      ____________________________________________________________
consensus             CCTTCTCCATTACTGTCTGTCGTTGAGTGTTATCGCCGATTCAGCTCTGCAGCTCTGCCG
 
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JMFF051O02+           GTGAGGTGACGGCTGAGGAAGTGAGGAGCGATGCAGCCAAGCAGAAGCCGAAGGGAGTAA
                      ____________________________________________________________
consensus             GTGAGGTGACGGCTGAGGAAGTGAGGAGCGATGCAGCCAAGCAGAAGCCGAAGGGAGTAA
 
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JMFF051O02+           CCGCAGAGGCGCAGACCGCCTGACTGAGTGACCGGAGTGTCGGCTGTGTCGCACTGTCGC
                      ____________________________________________________________
consensus             CCGCAGAGGCGCAGACCGCCTGACTGAGTGACCGGAGTGTCGGCTGTGTCGCACTGTCGC
 
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JMFF051O02+           CGAGGATGGGAGAAGATGAGTGGAAATCGTGGTCTACTGGTCTCGTCAGTCGTCACTCTC
                      ____________________________________________________________
consensus             CGAGGATGGGAGAAGATGAGTGGAAATCGTGGTCTACTGGTCTCGTCAGTCGTCACTCTC
 
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JMFF051O02+           GTGGAGAAGACGAGATTCCAGACCGAATGGTTGAATGAACGAACAGACGATTAGGCATTT
                      ____________________________________________________________
consensus             GTGGAGAAGACGAGATTCCAGACCGAATGGTTGAATGAACGAACAGACGATTAGGCATTT