Contig 000301:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027C23Sequence523000301 (3)gb|ABG37022.1|2e-52serine protease [Nicotiana tabacum]661005579 (3)ref|XP_009608769.1|3e-70PREDICTED: subtilisin-like protease SDD1 [Nicotiana tomentosiformis]
JMFF051L16Sequence425000301 (3)ref|XP_009614059.1|2e-32PREDICTED: subtilisin-like protease [Nicotiana tomentosiformis]271005579 (3)
JMFF051N16Sequence523000301 (3)gb|ABG37022.1|2e-52serine protease [Nicotiana tabacum]488005579 (3)ref|XP_009608769.1|2e-34PREDICTED: subtilisin-like protease SDD1 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF027C23+                            AAACGAAGGATGGTCACGCGCAATCCCGGAATCCAAAACCCCG
JMFF051N16+                            AAACGAAGGATGGTCACGCGCAATCCCGGAATCCAAAACCCCG
                      ____________________________________________________________
consensus                              AAACGAAGGATGGTCACGCGCAATCCCGGAATCCAAAACCCCG
 
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JMFF027C23+           ATTATAACCCCTTTACCATAACTCGAATCTCTCCAGAATCCCATATTCTGCTGCAACCCC
JMFF051L16+                                                                  ACCCC
JMFF051N16+           ATTATAACCCCTTTACCATAACTCGAATCTCTCCAGAATCCCATATTCTGCTGCAACCCC
                      ____________________________________________________________
consensus             ATTATAACCCCTTTACCATAACTCGAATCTCTCCAGAATCCCATATTCTGCTGCAACCCC
 
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JMFF027C23+           AAGAACCCTGGAGAATGGGTAGTGTGTAAAGGCAAAATTCTCTCCGGCGCCGCCGATATA
JMFF051L16+           AAGACCCCTGGAGAATGGGTAGTGTGTAAAGGCAAAATTCTCTCCGGCGCCGCCGATATA
JMFF051N16+           AAGAACCCTGGAGAATGGGTAGTGTGTAAAGGCAAAATTCTCTCCGGCGCCGCCGATATA
                      ____________________________________________________________
consensus             AAGAACCCTGGAGAATGGGTAGTGTGTAAAGGCAAAATTCTCTCCGGCGCCGCCGATATA
 
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JMFF027C23+           AACCCGTCCTTGTTCCCCATTTCTTTCACTTCCTCGGCAGAAAGTTTAGCCGCAAACCCC
JMFF051L16+           AACCCGTCCTTGTTCCCCATTTCTTTCACTTCCTCGGCAGAAAGTTTAGCCGCAAACCCC
JMFF051N16+           AACCCGTCCTTGTTCCCCATTTCTTTCACTTCCTCGGCAGAAAGTTTAGCCGCAAACCCC
                      ____________________________________________________________
consensus             AACCCGTCCTTGTTCCCCATTTCTTTCACTTCCTCGGCAGAAAGTTTAGCCGCAAACCCC
 
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JMFF027C23+           TTCATAACATTCCGGTACATAAACACCATCCGCGACTCACTATAGCCGCCGCCGGCTACT
JMFF051L16+           TTCATAACATTCCGGTACATAAACACCATCCGCGACTCACTATAGCCGCCGCCGGCTACT
JMFF051N16+           TTCATAACATTCCGGTACATAAACACCATCCGCGACTCACTATAGCCGCCGCCGGCTACT
                      ____________________________________________________________
consensus             TTCATAACATTCCGGTACATAAACACCATCCGCGACTCACTATAGCCGCCGCCGGCTACT
 
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JMFF027C23+           GTGGTCGGCAGGAATGATTTATACCAGTGTTCTAAATCCACAGAAGATGAGGACGATGAC
JMFF051L16+           GTGGTCGGCAGGAATGATTTATACCAGTGTTCTAAATCCACAGAAGATGAGGACGATGAC
JMFF051N16+           GTGGTCGGCAGGAATGATTTATACCAGTGTTCTAAATCCACAGAAGATGAGGACGATGAC
                      ____________________________________________________________
consensus             GTGGTCGGCAGGAATGATTTATACCAGTGTTCTAAATCCACAGAAGATGAGGACGATGAC
 
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JMFF027C23+           TGAGTGGAAATTCTGCTGTGAGGCAACTCCACTCGAACAATGTAAGTCTCAAGTTTACTG
JMFF051L16+           TGAGTGGAAATTCTGCTGTGAGGCAACTCCACTCGAACAATGTAAGTCTCAAGTTTACTG
JMFF051N16+           TGAGTGGAAATTCTGCTGTGAGGCAACTCCACTCGAACAATGTAAGTCTCAAGTTTACTG
                      ____________________________________________________________
consensus             TGAGTGGAAATTCTGCTGTGAGGCAACTCCACTCGAACAATGTAAGTCTCAAGTTTACTG
 
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JMFF027C23+           GCAATAGTTGCCGTCGAACAAAAACCAATAAGTACGGAAAGGATTAAAAACATTCTCAAG
JMFF051L16+           GCAATAGTTGCCGTCGAACAAAAACCAATAAGTACGGAAAGGATTAAAAACATTCTCAAG
JMFF051N16+           GCAATAGTTGCCGTCGAACAAAAACCAATAAGTACGGAAAGGATTAAAAACATTCTCAAG
                      ____________________________________________________________
consensus             GCAATAGTTGCCGTCGAACAAAAACCAATAAGTACGGAAAGGATTAAAAACATTCTCAAG
 
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JMFF027C23+           AATTTCATGTTTGGTAACTAAACAATAATGCAAGAACAGAGGAATTTGGTTGATGA    
JMFF051L16+           AATTTCATGTTTGGTAACTAAACAATAATGCAAGAACAGAGGAATTTGGTTGATGA    
JMFF051N16+           AATTTCATGTTTGGTAACTAAACAATAATGCAAGAACAGAGGAATTTGGTTGATGATATT
                      ____________________________________________________________
consensus             AATTTCATGTTTGGTAACTAAACAATAATGCAAGAACAGAGGAATTTGGTTGATGATATT