Contig 000296:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051D08Sequence496000296 (4)ref|XP_009608716.1|189PREDICTED: protein Iojap-related, mitochondrial [Nicotiana tomentosiformis]469000296 (4)
JMFN016B11Sequence612000296 (4)ref|XP_009608716.1|208PREDICTED: protein Iojap-related, mitochondrial [Nicotiana tomentosiformis]
JMFN033E20Sequence616000296 (4)ref|XP_009608716.1|211PREDICTED: protein Iojap-related, mitochondrial [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF051D08- CTGTAGCATTCAAGCAATCAAATTCAATGCAAAACATCAAATCCCTTGGATTTA
                      ____________________________________________________________
consensus CTGTAGCATTCAAGCAATCAAATTCAATGCAAAACATCAAATCCCTTGGATTTA
 
. : . : . : . : . : . :
rJMFF051D08- GGCACAACATCAAACTTTGATCGCTCAGATCACAGCAAAAATAGAACCCCAACATCGAGC
                      ____________________________________________________________
consensus GGCACAACATCAAACTTTGATCGCTCAGATCACAGCAAAAATAGAACCCCAACATCGAGC
 
. : . : . : . : . : . :
rJMFF051D08- AACACAGACCACAAATTTGATACAATTAAAAACAGCAGTCTAGCTATTCATAATTCCAAA
                      ____________________________________________________________
consensus AACACAGACCACAAATTTGATACAATTAAAAACAGCAGTCTAGCTATTCATAATTCCAAA
 
. : . : . : . : . : . :
rJMFF051D08- TTTGTAAAACTTATCAGCTCAATTGGGTTTCTTTCTGCCTTTCTGGTATAGAAAATAGAA
                      ____________________________________________________________
consensus TTTGTAAAACTTATCAGCTCAATTGGGTTTCTTTCTGCCTTTCTGGTATAGAAAATAGAA
 
. : . : . : . : . : . :
rJMFF051D08- AATATTAGCTCAAGCAAAGATTCAATGAAATTCGCAGCACAAGAATCTTCAGAATGCAAG
                      ____________________________________________________________
consensus AATATTAGCTCAAGCAAAGATTCAATGAAATTCGCAGCACAAGAATCTTCAGAATGCAAG
 
. : . : . : . : . : . :
rJMFF051D08- TAAAGAACAGAAATTTCAGCCGTGGAGATCACTTCTGCAATCGATCGATTTCACTGATGA
JMFN033E20+ GGAGATCACTTCTGCAATCGATCGATTTCACTGATGA
JMFN016B11+ GCAATCGATCGATTTCACTGATGA
                      ____________________________________________________________
consensus TAAAGAACAGAAATTTCAGCCGTGGAGATCACTTCTGCAATCGATCGATTTCACTGATGA
 
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rJMFF051D08- TTAAGCGCCCGGCACGATTGCCTTTGGGCGTTTCTTAGAATTATTCTTGGGACGAATCTT
JMFN033E20+ TTAAGCGCCCGGCACGATTGCCTTTGGGCGTTTCTTAGAATTATTCTTGGGACGAATCTT
JMFN016B11+ TTAAGCGCCCGGCACGATTGCCTTTGGGCGTTTCTTAGAATTATTCTTGGGACGAATCTT
                      ____________________________________________________________
consensus TTAAGCGCCCGGCACGATTGCCTTTGGGCGTTTCTTAGAATTATTCTTGGGACGAATCTT
 
. : . : . : . : . : . :
rJMFF051D08- CACGAAAGCCTTGGCCAAAGCCTGGTCTTGATCCTGCTTCTGAATCTGATCCTCG
JMFN033E20+ CACGAAAGCCTTGGCCAAAGCCTGGTCTTGATCCTGCTTCTGAATCTGATCCTCGACGCT
JMFN016B11+ CACGAAAGCCTTGGCCAAAGCCTGGTCTTGATCCTGCTTCTGAATCTGATCCTCGACGCT
                      ____________________________________________________________
consensus CACGAAAGCCTTGGCCAAAGCCTGGTCTTGATCCTGCTTCTGAATCTGATCCTCGACGCT
 
. : . : . : . : . : . :
JMFN033E20+ ATTTGATGCATCATCTGTGGCCCAAAGCCTCTCCAAATCGTAATAAGTTCTCACTTTCTC
JMFN016B11+ ATTTGATGCATCATCTGTGGCCCAAAGCCTCTCCAAATCGTAATAAGTTCTCACTTTCTC
JMFF051D08+ ATTTGATGCATCATCTGTGGCCCAAAGCCTCTCCAAATCGTAATAAGTTCTCACTTTCTC
                      ____________________________________________________________
consensus ATTTGATGCATCATCTGTGGCCCAAAGCCTCTCCAAATCGTAATAAGTTCTCACTTTCTC
 
. : . : . : . : . : . :
JMFN033E20+ GTCGAGAGCGTGAATTATCAAGGTGCCGGAATCAATAACAATCCACTTCCCTCCCTCTTG
JMFN016B11+ GTCGAGAGCGTGAATTATCAAGGTGCCGGAATCAATAACAATCCACTTCCCTCCCTCTTG
JMFF051D08+ GTCGAGAGCGTGAATTATCAAGGTGCCGGAATCAATAACAATCCACTTCCCTCCCTCTTG
                      ____________________________________________________________
consensus GTCGAGAGCGTGAATTATCAAGGTGCCGGAATCAATAACAATCCACTTCCCTCCCTCTTG
 
. : . : . : . : . : . :
JMFN033E20+ CCCTTCCACGCTCGGCAACAGCATTCTTTTCGCTCCTTTCTGCTTTTGCTTCATCTTGTA
JMFN016B11+ CCCTTCCACGCTCGGCAACAGCATTCTTTTCGCTACTTTCTGCTTTTGCTTCATCTTGTA
JMFF051D08+ CCCTTCCACGCTCGGCAACAGCATTCTTTTCGCTCCTTTCTGCTTTTGCTTCATCTTGTA
                      ____________________________________________________________
consensus CCCTTCCACGCTCGGCAACAGCATTCTTTTCGCTCCTTTCTGCTTTTGCTTCATCTTGTA
 
. : . : . : . : . : . :
JMFN033E20+ AATCAAAGCTTGAGCGATATTCCTTACGTGCCAGGCTGATCTTCCGGTGGCGATGACCAT
JMFN016B11+ AATCAAAGCTTGAGCGATATTCCTTACGTGCCAGGCTGATCTTCCGGTGGCGATGACCAT
JMFF051D08+ AATCAGAGCTTGAGCGATATTCCTTACGTGCCAGGCTGATCTTCCGGTGGCGATGACCAT
                      ____________________________________________________________
consensus AATCAAAGCTTGAGCGATATTCCTTACGTGCCAGGCTGATCTTCCGGTGGCGATGACCAT
 
. : . : . : . : . : . :
JMFN033E20+ ATAATCGGCGAAGTCGTGCTTCGGAATCGGAATGACTTGGATGTTGTCGGCCTTAACATC
JMFN016B11+ ATAATCGGCGAAGTCGTGCTTCGGAATCGGAATGACTTGGATGTTGTCGGCCTTAACATC
JMFF051D08+ ATAATCGGCGAAGTCGTGCTTCGGAATCGGAATGACTTGGATGTTGTCGGCCTTAACATC
                      ____________________________________________________________
consensus ATAATCGGCGAAGTCGTGCTTCGGAATCGGAATGACTTGGATGTTGTCGGCCTTAACATC
 
. : . : . : . : . : . :
JMFN033E20+ GGTGAGGATTTTCTCCACCTCCTCCAGCTTCAGCAACTCTCCGCCGCCGTTAATAAGCTT
JMFN016B11+ GGTGAGGATTTTCTCCACCTCCTCCAGCTTCAGCAACTCTCCGCCGCCGTTAATAAGCTT
JMFF051D08+ GGTGAGGATTTTCTCCACCTCCTCCAGCTTCAGCAACTCTCCGCCGCCGTTAATAAGCTT
                      ____________________________________________________________
consensus GGTGAGGATTTTCTCCACCTCCTCCAGCTTCAGCAACTCTCCGCCGCCGTTAATAAGCTT
 
. : . : . : . : . : . :
JMFN033E20+ GCTTTCCGCGGCGGAGGAACATAGAGAACGATTGACAACGGTGGAGCAAAACCCTAGCTG
JMFN016B11+ GCTTTCCGCGGCGGAGGAACATAGAGAACGATTGACAACGGTGGAGCAAAACCCTAGCTG
JMFF051D08+ GCTTTCCGCGGCGGAGGAACATAGAGAACGATTGACAACGGTGGAGCAAAACCCTAGCTG
                      ____________________________________________________________
consensus GCTTTCCGCGGCGGAGGAACATAGAGAACGATTGACAACGGTGGAGCAAAACCCTAGCTG
 
. : . : . : . : . : . :
JMFN033E20+ CTTGCAGCAAGGTGAGAGAGCTCGAGACCTTAGAACCGA
JMFN016B11+ CTTGCAGCAAGGTGAGAGAGCTCGAGACCTTAGAACCGACCACATTGC
JMFF051D08+ CTTGCAGCAAGGTGAGAGAGCTCGAGACCTTAGAACCGACCACATTGCATTACTGCCCGG
                      ____________________________________________________________
consensus CTTGCAGCAAGGTGAGAGAGCTCGAGACCTTAGAACCGACCACATTGCATTACTGCCCGG