| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005L21 | Sequence | 479 | 000292 (4) | ref|XP_004307223.1| | 5e-44 | PREDICTED: cycloartenol-C-24-methyltransferase [Fragaria vesca subsp. vesca] | 792 | 004115 (3) | ref|XP_009630910.1| | 6e-112 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana tomentosiformi |
| JMFF006D11 | Sequence | 577 | 000292 (4) | ref|XP_004307223.1| | 1e-66 | PREDICTED: cycloartenol-C-24-methyltransferase [Fragaria vesca subsp. vesca] | |||||
| JMFF044I14 | Sequence | 663 | 000292 (4) | ref|XP_009630910.1| | 2e-90 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana tomentosiformi | 488 | 004115 (3) | ref|XP_009761578.1| | 3e-19 | PREDICTED: cycloartenol-C-24-methyltransferase 1-like [Nicotiana sylvestris] re |
| JMFF050P07 | Sequence | 590 | 000292 (4) | ref|XP_007218252.1| | 7e-59 | hypothetical protein PRUPE_ppa008084mg [Prunus persica] gb|EMJ19451.1| hypotheti | 537 | 004115 (3) | gb|AAC34951.1| | 2e-41 | S-adenosyl-methionine-sterol-C- methyltransferase [Nicotiana tabacum] |
This contig is upended
. : . : . : . : . : . :
JMFF044I14+ CAACTAGATTCAATCGCATATATAGCATCAAAGTTA
____________________________________________________________
consensus CAACTAGATTCAATCGCATATATAGCATCAAAGTTA
. : . : . : . : . : . :
JMFF044I14+ TTGTCGGGGAACGGCATTTTCATGAAGTCTGCCTTCACAAAGCCACAACTGTGCTCTAAT
____________________________________________________________
consensus TTGTCGGGGAACGGCATTTTCATGAAGTCTGCCTTCACAAAGCCACAACTGTGCTCTAAT
. : . : . : . : . : . :
JMFF044I14+ CCCACTGCACGGTTCAACACCTTTCCTCTAGCTATCTGATATTCGTTGTTGTTGAGGCCC
JMFF006D11+ AGGCCC
JMFF050P07+ CGGTTCAACACCTTTCCTCTAGCTATCTGATATTCGTGTGTG-NNAGGCCC
____________________________________________________________
consensus CCCACTGCACGGTTCAACACCTTTCCTCTAGCTATCTGATATTCGTTTTTGTTGAGGCCC
. : . : . : . : . : . :
JMFF044I14+ GTGACCTTTGTAAGACTGAAACGTGCGATTTCTCTTAATGGCCCACCAATCCCACACCCT
JMFF006D11+ GTGACCTTTGTAAGACTGAAACGTGCGATTTCTCTTAATGGCCCACCAATCCCACACCCT
JMFF005L21+ T
JMFF050P07+ GTGACCTTNGTAAGACTGAAACGTGCGATTTCTCTTAATGGCCCACCAATCCCACACCCT
____________________________________________________________
consensus GTGACCTTTGTAAGACTGAAACGTGCGATTTCTCTTAATGGCCCACCAATCCCACACCCT
. : . : . : . : . : . :
JMFF044I14+ ACGTCCAAGACCGTCTGTCCAGGTTTCAAGTTTAAATGTAATGCAAGGAAGTGTTCGTGG
JMFF006D11+ ACGTCCAAGACCGTCTGTCCAGGTTTCAAGTTTAAATGTAATGCAAGGAAGTGTTCGTGG
JMFF005L21+ ACGTCCAAGACCGTCTGTCCAGGTTTCAAGTTTAAATGTAATGCAAGGAAGTGTTCGTGG
JMFF050P07+ ACGTCCAAGACCGTCTGTCCAGGTTTCAAGTTTAAATGTAATGCAAGGAAGTGTTCGTGG
____________________________________________________________
consensus ACGTCCAAGACCGTCTGTCCAGGTTTCAAGTTTAAATGTAATGCAAGGAAGTGTTCGTGG
. : . : . : . : . : . :
JMFF044I14+ CGCTTAATACTCTCTTGAAGGGATTCTCCTTTCCATCTTGGTGCAAAGTGGAAACATTCT
JMFF006D11+ CGCTTAATACTCTCTTGAAGGGATTCTCCTTTCCATCTTGGTGCAAAGTGGAAACATTCT
JMFF005L21+ CGCTTAATACTCTCTTGAAGGGATTCTCCTTTCCATCTTGGTGCAAAGTGGAAACATTCT
JMFF050P07+ CGCTTAATACTCTCTTGAAGGGATTCTCCTTTCCATCTTGGTGCAAAGTGGAAACATTCT
____________________________________________________________
consensus CGCTTAATACTCTCTTGAAGGGATTCTCCTTTCCATCTTGGTGCAAAGTGGAAACATTCT
. : . : . : . : . : . :
JMFF044I14+ CCCCAGCCATATTCATAGAAACTAGTGACAAGATCATAGTATTTATTGACCATATCACTG
JMFF006D11+ CCCCAGCCATATTCATAGAAACTAGTGACAAGATCATAGTATTTATTGACCATATCACTG
JMFF005L21+ CCCCAGCCATATTCATAGAAACTAGTGACAAGATCATAGTATTTATTGACCATATCACTG
JMFF050P07+ CCCCAGCCATATTCATAGAAACTAGTGACAAGATCATAGTATTTATTGACCATATCACTG
____________________________________________________________
consensus CCCCAGCCATATTCATAGAAACTAGTGACAAGATCATAGTATTTATTGACCATATCACTG
. : . : . : . : . : . :
JMFF044I14+ TAATTACTCTTTCTCTCCTCCTCTTCGCCTCCATAGTAACCATGGTACTTCTCATACTTG
JMFF006D11+ TAATTACTCTTTCTCTCCTCCTCTTCGCCTCCATAGTAACCATGGTACTTCTCATACTTG
JMFF005L21+ TAATTACTCTTTCTCTCCTCCTCTTCGCCTCCATAGTAACCATGGTACTTCTCATACTTG
JMFF050P07+ TAATTACTCTTTCTCTCCTCCTCTTCGCCTCCATAGTAACCATGGTACTTCTCATACTTG
____________________________________________________________
consensus TAATTACTCTTTCTCTCCTCCTCTTCGCCTCCATAGTAACCATGGTACTTCTCATACTTG
. : . : . : . : . : . :
JMFF044I14+ TCAACAGAAGACTGAACCTCGGCCTTGTCGATCTTACCGCCAACCCCAGATGCGAGATCA
JMFF006D11+ TCAACAGAAGACTGAACCTCGGCCTTGTCGATCTTACCGCCAACCCCAGATGCGAGATCA
JMFF005L21+ TCAACAGAAGACTGAACCTCGGCCTTGTCGATCTTACCGCCAACCCCAGATGCGAGATCA
JMFF050P07+ TCAACAGAAGACTGAACCTCGGCCTTGTCGATCTTACCGCCAACCCCAGATGCGAGATCA
____________________________________________________________
consensus TCAACAGAAGACTGAACCTCGGCCTTGTCGATCTTACCGCCAACCCCAGATGCGAGATCA
. : . : . : . : . : . :
JMFF044I14+ AAGACTCCAGCTTTCGACATCTCTCCTAAACCCAGCAGCTTATACTGAAAGGCAGAGAGG
JMFF006D11+ AAGACTCCAGCTTTCGACATCTCTCCTAAACCCAGCAGCTTATACTGAAAGGCAGAGAGG
JMFF005L21+ AAGACTCCAGCTTTCGACATCTCTCCTAAACCCAGCAGCTT----TGAAAGGCAGAGAGG
JMFF050P07+ AAGACTCCAGCTTTCGACATCTCTCCTAAACCCAGCAGCTTATACTGAAAGGCAGAGAGG
____________________________________________________________
consensus AAGACTCCAGCTTTCGACATCTCTCCTAAACCCAGCAGCTTATACTGAAAGGCAGAGAGG
. : . : . : . : . : . :
JMFF044I14+ ATCTAGAGAAACCC-TTGAGAATACGAGAGAGAGAAGAGATCAGACTAAGAGTGTGAGAG
JMFF006D11+ ATCTAGAGAAACCCTTTGAGAATACGAGAGAGAGAAGAGATCAGACTAAGAGTGTGAGAG
JMFF005L21+ ATCTAGAGAAACCCTTTGAGAATACGAGAGAGAGAAGAGATCAGACTAAGAGTGTGAGAG
JMFF050P07+ ATCTAGAGAAACCCTTTGAGAATACGAGAGAGAGAAGAGATCAGACTAAGAGTGTGAGAG
____________________________________________________________
consensus ATCTAGAGAAACCCTTTGAGAATACGAGAGAGAGAAGAGATCAGACTAAGAGTGTGAGAG
. : . : . : . : . : . :
JMFF044I14+ ACTAAAATGAAGGGAAAAACAACTAAAC
JMFF006D11+ ACTAAAATGAAGGGAAAAACAACTAAACATACAAAGAAGGCGGCAGAGAGCTCAGAGAAT
JMFF005L21+ ACTAAAATGAAGGGAAAAACAACTAAACATACAAAGAAGGCGGCAGAGAGCTCAGAGAAT
JMFF050P07+ ACTAAAATGAAGGGAAAAACAACTAAACATACAAAGAAGGCGGCAGAGAGCTCAGAGAAT
____________________________________________________________
consensus ACTAAAATGAAGGGAAAAACAACTAAACATACAAAGAAGGCGGCAGAGAGCTCAGAGAAT