Contig 000289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF034P17Sequence346000289 (2)ref|XP_009783584.1|3e-06PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris154022365ref|XP_006364268.1|9e-12PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum tuberosum]
JMFF050L23Sequence596000289 (2)dbj|BAC22609.1|1e-3741 kD chloroplast nucleoid DNA binding protein (CND41) [Nicotiana sylvestris]573014930ref|XP_008223730.1|3e-48PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Prunus mume]

Alignment

This contig is upended


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JMFF050L23+               GGCGCAGGGCTGGCATTGAGTCCAGGTGAGATGGCTGCCGGTGTCGAACACTAGAT
                      ____________________________________________________________
consensus                 GGCGCAGGGCTGGCATTGAGTCCAGGTGAGATGGCTGCCGGTGTCGAACACTAGAT
 
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JMFF050L23+           CCAGCTCTTTTTCCGGCGTCCCCAATCCCACCGTCACCACGTAGTTTCCTACGCCGCCTG
                      ____________________________________________________________
consensus             CCAGCTCTTTTTCCGGCGTCCCCAATCCCACCGTCACCACGTAGTTTCCTACGCCGCCTG
 
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JMFF050L23+           GGCTCTCATGCTCCGCCGGGAGATTGGCGGTTTTTGACTCGCTCATCTCTCCTTTGGTCT
                      ____________________________________________________________
consensus             GGCTCTCATGCTCCGCCGGGAGATTGGCGGTTTTTGACTCGCTCATCTCTCCTTTGGTCT
 
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JMFF050L23+           TGGCCACTCGGGCTTGGATTGAGTTGACTCGTGACTCGTCGTGCAGCAGAAGTTCACTCA
                      ____________________________________________________________
consensus             TGGCCACTCGGGCTTGGATTGAGTTGACTCGTGACTCGTCGTGCAGCAGAAGTTCACTCA
 
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JMFF034P17+                             TCCGGGCAGAGCAGGGACCAAACCTATGAACAACCTTCATGG
JMFF050L23+           CGGTTGGCGAGTCCTGGATCCGGGCAGAGCAGGGACCAAACCTATGAACAACCTTCATGG
                      ____________________________________________________________
consensus             CGGTTGGCGAGTCCTGGATCCGGGCAGAGCAGGGACCAAACCTATGAACAACCTTCATGG
 
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JMFF034P17+           ATGCCTTTCTACTTGGACCTTTGGAAGTGGTTGTATTGCAAACAAAGGGTGGAAGCATGG
JMFF050L23+           ATGCCTTTCTACTTGGACCTTTGGAAGTGGTTGTATTGCAAACAAAGGGTGGAAGCATGG
                      ____________________________________________________________
consensus             ATGCCTTTCTACTTGGACCTTTGGAAGTGGTTGTATTGCAAACAAAGGGTGGAAGCATGG
 
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JMFF034P17+           AAGTGAGTGGAAGAGTATGGTGGTGATGAGCTTCTAACCCAACTCTTTGTTCAGAAGCAT
JMFF050L23+           AAGTGAGTGGAAGAGTATGGTGGTGATGAGCTTCTAACCCAACTCTTTGTTCAGAAGCAT
                      ____________________________________________________________
consensus             AAGTGAGTGGAAGAGTATGGTGGTGATGAGCTTCTAACCCAACTCTTTGTTCAGAAGCAT
 
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JMFF034P17+           TCCCCTTTCCCAAACCACATGAAAGCATGATGATAATAAGCAGAATGAAAACATTTGCAG
JMFF050L23+           TCCCCTTTCCCAAACCACATGAAAGCATGATGATAATAAGCAGAATGAAAACATTTGCAG
                      ____________________________________________________________
consensus             TCCCCTTTCCCAAACCACATGAAAGCATGATGATAATAAGCAGAATGAAAACATTTGCAG
 
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JMFF034P17+           ATGATTGAAGAAGAAGAAGAAGAAGAAGAGGAAGCTTCAACATCCTATCTGCACTACTTA
JMFF050L23+           ATGATTGAAGAAGAAGAAGAAGAAGAAGAGGAAGCTTCAACATCCTATCTGCACTACTTA
                      ____________________________________________________________
consensus             ATGATTGAAGAAGAAGAAGAAGAAGAAGAGGAAGCTTCAACATCCTATCTGCACTACTTA
 
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JMFF034P17+           GTTTTCTACGACAACCCATTCTTGATCATCACTGATTTCTGATCTCTTTCTCATATAGGT
JMFF050L23+           GTTTTCTACGACAACCCATTCTTGATCATCACTGATTTCTGATCTCTTTCTCATATAGGT
                      ____________________________________________________________
consensus             GTTTTCTACGACAACCCATTCTTGATCATCACTGATTTCTGATCTCTTTCTCATATAGGT