| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP008D09 | Sequence | 268 | 000288 (5) | ref|XP_009761805.1| | 1e-26 | PREDICTED: scopoletin glucosyltransferase [Nicotiana sylvestris] gb|AAB36653.1| | |||||
| JMFF020M24 | Sequence | 548 | 000288 (5) | ref|XP_009761805.1| | 1e-66 | PREDICTED: scopoletin glucosyltransferase [Nicotiana sylvestris] gb|AAB36653.1| | 721 | 004006 (6) | emb|CAA59450.1| | 1e-23 | twi1 [Solanum lycopersicum] |
| JMFF027C16 | Sequence | 486 | 000288 (5) | ref|XP_009761805.1| | 3e-60 | PREDICTED: scopoletin glucosyltransferase [Nicotiana sylvestris] gb|AAB36653.1| | 648 | 004006 (6) | emb|CAA59450.1| | 6e-40 | twi1 [Solanum lycopersicum] |
| JMFF050I17 | Sequence | 631 | 000288 (5) | ref|XP_009761805.1| | 4e-74 | PREDICTED: scopoletin glucosyltransferase [Nicotiana sylvestris] gb|AAB36653.1| | |||||
| JMSF005K08 | Sequence | 309 | 000288 (5) | ref|XP_009761805.1| | 2e-38 | PREDICTED: scopoletin glucosyltransferase [Nicotiana sylvestris] gb|AAB36653.1| | 114 | 004006 (6) | |||
This contig is upended
. : . : . : . : . : . :
JMFF050I17+ GAGGAAGATTGGGAATCGTAAAAAGTTCAGA
____________________________________________________________
consensus GAGGAAGATTGGGAATCGTAAAAAGTTCAGA
. : . : . : . : . : . :
JMFF020M24+ TGAAAGGCTTGTAAACTCCAAGGCTTTGCATAGCACACAAGGC
JMFF050I17+ ATCAGATGAAACATGGTTGAAAGGCTTGTGAGTTCTAAGGCTGTTCATAGCACACATGGC
____________________________________________________________
consensus ATCAGATGAAACATGGTTGAAAGGCTTGTGAGTTCTAAGGCTTTTCATAGCACACATGGC
. : . : . : . : . : . :
JMFF027C16+ GTGAAAGATGAGTCTTGGGATATCGAACTTGGCGGCGGCGTTAGT
JMFF020M24+ CAAGTGGCTGATTCCGTGAAAGATGAGTCTTGGGATATCGAACTTGGCGGCGGCGTTAGT
JMFF050I17+ CAAGTAGCTGGATCCGTGAAAGATCAATCTTGGGATATCAAACTTGGCCGCCGCCTCTGT
____________________________________________________________
consensus CAAGTGGCTGGTTCCGTGAAAGATGAGTCTTGGGATATCGAACTTGGCGGCGGCGTTAGT
. : . : . : . : . : . :
JMFF027C16+ AGCCCACGGGAAAAACATATCGGCGACGAGGCAATCGGGACGGAGCTCTTGTAAGAGTTC
JMFF020M24+ AGCCCACGGGAAAAACATATCGGCGACGAGGCAATCGGGACGGAGCTCTTGTAAGAGTTC
JMFF050I17+ AGCCCAGGGGAAAAACATATCGGCGACGAGGCAATTTGGACGGAGCTCTTGTAAGAGGTG
____________________________________________________________
consensus AGCCCACGGGAAAAACATATCGGCGACGAGGCAATCGGGACGGAGCTCTTGTAAGAGTTC
. : . : . : . : . : . :
JMFF027C16+ TTCAAGAGATGGTTGGAGCAAAGCGCAGGCCTTGAAGAATGTGGGGAGTCCGTCATCGGA
JMFF020M24+ TTCAAGAGATGGTTGGAGCAAAGCGCAGGCCTTGAAGAATGTGGGGAGTCCGTCATCGGA
JMFF050I17+ TTCAAGAGGTGGTTGGAGCATAGCGCAGGCCTTGTGGAACCTGGGGAGTCCGTCGACGGA
____________________________________________________________
consensus TTCAAGAGATGGTTGGAGCAAAGCGCAGGCCTTGAAGAATGTGGGGAGTCCGTCATCGGA
. : . : . : . : . : . :
JMFF027C16+ GGGGATCTGATCAAGACGCTGGCAACTTTCCGGCAAGCCAACCTCGACGCCGGGGAATTC
JMSF005K08+ TTCCGGCAAGCCAACCTCGACGCCGGGGAATTC
JMFF020M24+ GGGGATCTGATCAAGACGCTGGCAACTTTCCGGCAAGCCAACCTCGACGCCGGGGAATTC
rJMCP008D09- AATTC
JMFF050I17+ GGGGATTTTGTCGGCGCTCTCGCAATCTTCCGGCAAGCCAACCTCGACGGCCGGGAATTC
____________________________________________________________
consensus GGGGATCTGATCAAGACGCTGGCAACTTTCCGGCAAGCCAACCTCGACGCCGGGGAATTC
. : . : . : . : . : . :
JMFF027C16+ CAGCAATCGAATCTCCATTTGGAACCCTAACTGCGTATACTTATCTACGGCTTTGGAGAA
JMSF005K08+ CAGCAATCGAATCTCCATTTGGAACCCTAACTGCGTATACTTATCTACGGCTTTGGAGAA
JMFF020M24+ CAGCAATCGAATCTCCATTTGGAACCCTAACTGCGTATACTTATCTACGGCTTTGGAGAA
rJMCP008D09- CAGCAAACGAATCTCCATTTGGAACCCCAACTGCGTATACTTTTCTACGGCTTTGGAGAA
JMFF050I17+ CAGCAAACGAATCTCCATTTGGAACCCCAACTGCGTATACTTTTCCACGGCTTTGGAGAA
____________________________________________________________
consensus CAGCAATCGAATCTCCATTTGGAACCCTAACTGCGTATACTTTTCTACGGCTTTGGAGAA
. : . : . : . : . : . :
JMFF027C16+ AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGTGAAGCGAAGAG
JMSF005K08+ AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGTGAAGCGAAGAG
JMFF020M24+ AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGTGAAGCGAAGAG
rJMCP008D09- AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGAGAAGCGAAGAG
JMFF050I17+ AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGAGAAGCGAAGAG
____________________________________________________________
consensus AACGGGTTGGTTTGCAGGGGTGGTGATTATGGTTGCCTTGACGCCACGTGAAGCGAAGAG
. : . : . : . : . : . :
JMFF027C16+ CTTGGCCATATCTAGAGTAGGAATCATGTGGCCATGAGCCAACATGGGGAAGAAGAAAAC
JMSF005K08+ CTTGGCCATATCTAGAGTAGGAATCATGTGGCCATGAGCCATCATGGGGAAGAAGAAAAC
JMFF020M24+ CTTGGCCATATCTAGAGTAGGAATCATGTGGCCATGAGCCAACATGGGGAAGAAGAAAAC
rJMCP008D09- CTTAGCCATATCAAGAGTAGGAATCATGTGGCCATGAGCCATGAAGGGGAAGAAGAAAAC
JMFF050I17+ CTTAGCCATATCAAGAGTAGGAATCATGTGGCCATGAGCCATGAAGGGGAAGAAGAAAAC
____________________________________________________________
consensus CTTGGCCATATCTAGAGTAGGAATCATGTGGCCATGAGCCATGATGGGGAAGAAGAAAAC
. : . : . : . : . : . :
JMFF027C16+ ATGAAGCTCACCCAT
JMSF005K08+ ATGAAGATCACCCAT
JMFF020M24+ ATGAAGCTCACCCAT
rJMCP008D09- ATGGAGGTCACCCATGCT
JMFF050I17+ ATGGAGGTCACCCATGCTGCCGACAATGAAAATATAATCGTCACAAAATCTTTGCTTGAA
____________________________________________________________
consensus ATGGAGGTCACCCATGCTGCCGACAATGAAAATATAATCGTCACAAAATCTTTGCTTGAA
. : . : . : . : . : . :
JMFF050I17+ ACAATAATTTTTCTTTTCTTTTCAAAAAAAAAAACTATAATTTATTTCTTCTTGATTGAT
____________________________________________________________
consensus ACAATAATTTTTCTTTTCTTTTCAAAAAAAAAAACTATAATTTATTTCTTCTTGATTGAT