Contig 000286:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048F04Sequence427000286 (2)
JMFF050G22Sequence647000286 (2)519020260ref|XP_009793454.1|4e-23PREDICTED: F-box protein At5g39450 [Nicotiana sylvestris] ref|XP_009793455.1| PR

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF050G22+ AGAATGAAGCTGACTCACAACCCATCAGGCATCATACCTGAACTCAT
                      ____________________________________________________________
consensus AGAATGAAGCTGACTCACAACCCATCAGGCATCATACCTGAACTCAT
 
. : . : . : . : . : . :
JMFF048F04+ TATACTCGGTATCTCACCAAAAATTCAAGACTTAGCTACCAATACTATCAACAGATAT
JMFF050G22+ TATATACTCCGTATCTCACCAAAAATTCAAGACTTAGCTACCAATACTATCAACAGATAT
                      ____________________________________________________________
consensus TATATACTCGGTATCTCACCAAAAATTCAAGACTTAGCTACCAATACTATCAACAGATAT
 
. : . : . : . : . : . :
JMFF048F04+ GCAAAAATCACGAAAATCCCATAGTTCAGGAAAAATGGCTAAGCAAAAGCAAAATCAACC
JMFF050G22+ GCAAAAATCACGAAAATCCCATAGTTCAGGAAAAATGGCTAAGCAAAAGCAAAATCAACC
                      ____________________________________________________________
consensus GCAAAAATCACGAAAATCCCATAGTTCAGGAAAAATGGCTAAGCAAAAGCAAAATCAACC
 
. : . : . : . : . : . :
JMFF048F04+ AGCTCAGTAAGTATGAATACCGAGATGGGTCACCGTGCACACCTCTTAAAAAACCTATCT
JMFF050G22+ AGCTCAGTAAGTATGAATACCGAGATGGGTCACCGTGCACACCTCTTAAAAAACCTATCT
                      ____________________________________________________________
consensus AGCTCAGTAAGTATGAATACCGAGATGGGTCACCGTGCACACCTCTTAAAAAACCTATCT
 
. : . : . : . : . : . :
JMFF048F04+ TGAGATTCAATCAGCGGAGGCAAATTGAACAAATTCTCACCTGGAAATGGAATGGACTTT
JMFF050G22+ TGAGATTCAATCAGCGGAGGCAAATTGAACAAATTCTCACCTGGAAATGGAATGGACTTT
                      ____________________________________________________________
consensus TGAGATTCAATCAGCGGAGGCAAATTGAACAAATTCTCACCTGGAAATGGAATGGACTTT
 
. : . : . : . : . : . :
JMFF048F04+ CTTGAAATCCTTCAAAAATCGCATCTTTACCATCTGAGGGGCTCCAAACCACGAATCTAC
JMFF050G22+ CTTGAAATCCTTCAAAAATCGCATCTTTACCATCTGAGGGGCTCCAAACCACGAATCTAC
                      ____________________________________________________________
consensus CTTGAAATCCTTCAAAAATCGCATCTTTACCATCTGAGGGGCTCCAAACCACGAATCTAC
 
. : . : . : . : . : . :
JMFF048F04+ GGCAACAAATAAATGGTAAGCAGAAAGGTGAGCTCTATGTACTGATTCTGCAGTTGAAGA
JMFF050G22+ GGCAACAAATAAATGGTAAGCAGAAAGGTGAGCTCTATGTACTGATTCTGCAGTTGAAGA
                      ____________________________________________________________
consensus GGCAACAAATAAATGGTAAGCAGAAAGGTGAGCTCTATGTACTGATTCTGCAGTTGAAGA
 
. : . : . : . : . : . :
JMFF048F04+ GTAGAATTAGAATATGGAGATTGATGTGAAGCTAGGTTTGGGTGGAATCACAGCTCACAA
JMFF050G22+ GTAGAATTAGAATATGGAGATTGATGTGAAGCTAGGTTTGGGTGGAATCACAGCTCACAA
                      ____________________________________________________________
consensus GTAGAATTAGAATATGGAGATTGATGTGAAGCTAGGTTTGGGTGGAATCACAGCTCACAA
 
. : . : . : . : . : . :
JMFF048F04+ GAAGTCATC
JMFF050G22+ GAAGTCATCAGTCCTCAACAACCGAACGAAAATAATCAACGGAATCGAGCTGGGCTCGCA
                      ____________________________________________________________
consensus GAAGTCATCAGTCCTCAACAACCGAACGAAAATAATCAACGGAATCGAGCTGGGCTCGCA
 
. : . : . : . : . : . :
JMFF050G22+ AATGATTGTACGTAGAGACTCCAGCGTGCGTTCCCCCAAGGGTGGGGTTGAATCCTCGAA
                      ____________________________________________________________
consensus AATGATTGTACGTAGAGACTCCAGCGTGCGTTCCCCCAAGGGTGGGGTTGAATCCTCGAA
 
. : . : . : . : . : . :
JMFF050G22+ AGGGACAAGTTGGGCTTTGGAATTTTCACTGTGATGATGGCATTGGCCCCCACTGAACCT
                      ____________________________________________________________
consensus AGGGACAAGTTGGGCTTTGGAATTTTCACTGTGATGATGGCATTGGCCCCCACTGAACCT