Contig 000284:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A04Sequence537000284 (2)ref|XP_009597405.1|6e-55PREDICTED: organic cation/carnitine transporter 4-like [Nicotiana tomentosiform669022294emb|CDP05819.1|1e-63unnamed protein product [Coffea canephora]
JMFF050D20Sequence614000284 (2)ref|XP_009597405.1|1e-64PREDICTED: organic cation/carnitine transporter 4-like [Nicotiana tomentosiform

Alignment

This contig is upended


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JMFF050D20+                                                         CATCCAAAAACGGC
                      ____________________________________________________________
consensus                                                           CATCCAAAAACGGC
 
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JMFF007A04+                                                        TGAATCTGAAAGATG
JMFF050D20+           GGTCATAATACAAACGATCGTTAAAGATCTTTTCTCCCCCATTCTTGAATCTGAAAGATG
                      ____________________________________________________________
consensus             GGTCATAATACAAACGATCGTTAAAGATCTTTTCTCCCCCATTCTTGAATCTGAAAGATG
 
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JMFF007A04+           CCCAAACACTCCAGCACCGATCATACAGCCGGCGAAGAACAACGATTGGACGAGGCCAAC
JMFF050D20+           CCCAAACACTCCAGCACCGATCATACAGCCGGCGAAGAACAACGATTGGACGAGGCCAAC
                      ____________________________________________________________
consensus             CCCAAACACTCCAGCACCGATCATACAGCCGGCGAAGAACAACGATTGGACGAGGCCAAC
 
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JMFF007A04+           CCGATATATCTGCCCACAAATAAGCCCAAACTCCGACACCGTGGAGCTCCCGTCGCCGCC
JMFF050D20+           CCGATATATCTGCCCACAAATAAGCCCAAACTCCGACACCGTGGAGCTCCCGTCGCCGCC
                      ____________________________________________________________
consensus             CCGATATATCTGCCCACAAATAAGCCCAAACTCCGACACCGTGGAGCTCCCGTCGCCGCC
 
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JMFF007A04+           GTCCCACTCCCAGGACCCGGGCTCAAGCCCACACACGCTCCCAGTCGCCGCCTCCGAGCA
JMFF050D20+           GTCCCACTCCCAGGACCCGGGCTCAAGCCCACACACGCTCCCAGTCGCCGCCTCCGAGCA
                      ____________________________________________________________
consensus             GTCCCACTCCCAGGACCCGGGCTCAAGCCCACACACGCTCCCAGTCGCCGCCTCCGAGCA
 
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JMFF007A04+           GGCGGCGGAGGAGCAGCGCCAGGCGGGGTCACGGTCGGCGAAGATCATGACCATGGTGTG
JMFF050D20+           GGCGGCGGAGGAGCAGCGCCAGGCGGGGTCACGGTCGGCGAAGATCATGACCATGGTGTG
                      ____________________________________________________________
consensus             GGCGGCGGAGGAGCAGCGCCAGGCGGGGTCACGGTCGGCGAAGATCATGACCATGGTGTG
 
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JMFF007A04+           GATCCCCTCAAGCGCCCACGCCAGGCTGGTTAACACGAAGTGCCGCAGCTGCCACCACCC
JMFF050D20+           GATCCCCTCAAGCGCCCACGCCAGGCTGGTTAACACGAAGTGCCGCAGCTGCCACCACCC
                      ____________________________________________________________
consensus             GATCCCCTCAAGCGCCCACGCCAGGCTGGTTAACACGAAGTGCCGCAGCTGCCACCACCC
 
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JMFF007A04+           GAACTCGCCGCAGTATTTCTGCAACGCGTCGTCGACGGTCAGCTTCTCGGCTTTGCCCCC
JMFF050D20+           GAACTCGCCGCAGTATTTCTGCAACGCGTCGTCGACGGTCAGCTTCTCGGCTTTGCCCCC
                      ____________________________________________________________
consensus             GAACTCGCCGCAGTATTTCTGCAACGCGTCGTCGACGGTCAGCTTCTCGGCTTTGCCCCC
 
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JMFF007A04+           CACCGCCGGGACGAGCGGCCGCCGGAGGTCCATGCCTCCGTCTCCGTCGTCCGAAGAAGA
JMFF050D20+           CACCGCCGGGACGAGCGGCCGCCGGAGGTCCATGCCTCCGTCTCCGTCGTCCGAAGAAGA
                      ____________________________________________________________
consensus             CACCGCCGGGACGAGCGGCCGCCGGAGGTCCATGCCTCCGTCTCCGTCGTCCGAAGAAGA
 
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JMFF007A04+           CCTCACCGTCGCCGGCGTCGTCGTAGACATCCTTTTGTTTTGTTTTGGCTTTTTTGTCGG
JMFF050D20+           CCTCACCGTCGCCGGCGTCGTCGTAGACATCCTTTTGTTTTGTTTTGGCTTTTTTGTCGG
                      ____________________________________________________________
consensus             CCTCACCGTCGCCGGCGTCGTCGTAGACATCCTTTTGTTTTGTTTTGGCTTTTTTGTCGG
 
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JMFF007A04+           ACGGCGAGATCACGAGATGTTTCGCGTGACCTCTGTGGATTC                  
JMFF050D20+           ACGGCGAGATCACGAGATGTTTCGCGTGACCTCTGTGGATTCCTGTTCCAGAAGCGATGA
                      ____________________________________________________________
consensus             ACGGCGAGATCACGAGATGTTTCGCGTGACCTCTGTGGATTCCTGTTCCAGAAGCGATGA