Contig 000283:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMCP007C07Sequence627000283 (11)emb|CDP10566.1|3e-107unnamed protein product [Coffea canephora]
JMCP009D02Sequence318000283 (11)emb|CDP10566.1|2e-34unnamed protein product [Coffea canephora]229000283 (11)ref|XP_009783700.1|5e-16PREDICTED: fasciclin-like arabinogalactan protein 17 [Nicotiana sylvestris]
JMFF022L19Sequence488000283 (11)ref|XP_011094205.1|1e-57PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]699008933 (8)ref|XP_011094205.1|2e-56PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMFF043I24Sequence631000283 (11)ref|XP_011094205.1|3e-75PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]576008933 (8)ref|XP_011094205.1|3e-20PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMFF044B06Sequence628000283 (11)ref|XP_011094205.1|2e-76PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]577008933 (8)ref|XP_011094205.1|3e-20PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMFF050B16Sequence578000283 (11)ref|XP_011094205.1|2e-56PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMFF051H12Sequence593000283 (11)ref|XP_011094205.1|3e-68PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]435008933 (8)
JMFF051H13Sequence594000283 (11)ref|XP_011094205.1|1e-65PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]541008933 (8)ref|XP_011094205.1|6e-12PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMFS053G11Sequence593000283 (11)ref|XP_011094205.1|8e-72PREDICTED: fasciclin-like arabinogalactan protein 17 [Sesamum indicum]
JMSF005G22Sequence277000283 (11)ref|XP_009587619.1|1e-22PREDICTED: fasciclin-like arabinogalactan protein 17 [Nicotiana tomentosiformis110002443 (14)

Alignment

This contig is upended


. : . : . : . : . : . :
JMCP007C07+ CGGCCTCCTCCGCCA
                      ____________________________________________________________
consensus CGGCCTCCTCCGCCA
 
. : . : . : . : . : . :
JMCP007C07+ CAACTTTATGGGGCAACCGCAATGTGTCGTATCTGATTTTGCCGAACCTCCTCACCGCAT
                      ____________________________________________________________
consensus CAACTTTATGGGGCAACCGCAATGTGTCGTATCTGATTTTGCCGAACCTCCTCACCGCAT
 
. : . : . : . : . : . :
JMCP007C07+ TGTACATACTCTCCTCCGTCTGGTACTCCGGTATGAGATGATAATACATTATCTGCTCCG
                      ____________________________________________________________
consensus TGTACATACTCTCCTCCGTCTGGTACTCCGGTATGAGATGATAATACATTATCTGCTCCG
 
. : . : . : . : . : . :
JMCP007C07+ GCGCCCCGGGCTCGCTCAGCTGATCGGTGGTGAGCTTAGCCATGGCTTCATCGTTGGGCG
                      ____________________________________________________________
consensus GCGCCCCGGGCTCGCTCAGCTGATCGGTGGTGAGCTTAGCCATGGCTTCATCGTTGGGCG
 
. : . : . : . : . : . :
JMCP007C07+ CTAAAACTGTCAGCACGTAGCCTTCTGAAACTAATCTCCCCATTTCCGTAGCTAAAGACG
                      ____________________________________________________________
consensus CTAAAACTGTCAGCACGTAGCCTTCTGAAACTAATCTCCCCATTTCCGTAGCTAAAGACG
 
. : . : . : . : . : . :
JMCP007C07+ TTAAATTTACCAGAATGTCGGCCAGTTCGTTGTACCCGCCGTAATGCAGGAGGGTTTGGA
                      ____________________________________________________________
consensus TTAAATTTACCAGAATGTCGGCCAGTTCGTTGTACCCGCCGTAATGCAGGAGGGTTTGGA
 
. : . : . : . : . : . :
JMCP007C07+ TGAAATCTTTGACCTGACTCTCGCCGTCGAAGTGGTGGTGGTGGCCGCCGGGTCCCGGAG
JMFS053G11+ CGCCGTCGAAGCGGTGGTGGTGGCCGCCGGGGCCCGGGG
                      ____________________________________________________________
consensus TGAAATCTTTGACCTGACTCTCGCCGTCGAAGTGGTGGTGGTGGCCGCCGGGTCCCGGGG
 
. : . : . : . : . : . :
JMCP007C07+ CCGGCGCCGGCGCTAGAGCTGGCCCGGGGGCCATTGCGTCGTAGATTGGTAGAGCCGGAG
JMFS053G11+ CGGGCGCGGGAGCTATAGATGGGCCGGGGGCCATGGCGTCGTAGATGGGGAGAACGGGAG
                      ____________________________________________________________
consensus CGGGCGCGGGCGCTATAGCTGGGCCGGGGGCCATTGCGTCGTAGATTGGTAGAGCGGGAG
 
. : . : . : . : . : . :
JMCP007C07+ GGGCGCCGGCGGGGACGGGATTCGCCGGTTTTTTCAGGCGGTGAGTCCTGGGGTCCACCT
JMCP009D02- CTGGGGTCCACCT
JMFS053G11+ GGGCGCCGGCGGGGACCGGGCCGGCGGGTTTCTTGAGACGGTGAGTCCTGGGGTCCACCT
                      ____________________________________________________________
consensus GGGCGCCGGCGGGGACGGGGTTGGCGGGTTTTTTGAGGCGGTGAGTCCTGGGGTCCACCT
 
. : . : . : . : . : . :
JMCP007C07+ CCGGAGCTCCGGTGGGGAGCACGGCGGAGATTGATCTCAAGCTCCGTCGAGTGTTGAAAT
rJMCP009D02+ GGGcgcgCccaccGGAGgtgccgcctctacGAcgcgAAGCTCCGGCGGGatagcttAT
JMCP009D02- CCGGGGCGCCGGTGGGGAGCACGGCGGAGATGGAGCGCAAGCTCCGGCGGGTATTGAAAT
JMFS053G11+ CAGGGGCGCCGGTGGGGAGGACGGCGGAGATGGACCGCAAGCTCCGCCGCGTGTTGAAAT
                      ____________________________________________________________
consensus CCGGGGCGCCGGTGGGGAGCACGGCGGAGATGGAGCGCAAGCTCCGGCGGGTATTGAAAT
 
. : . : . : . : . : . :
JMCP007C07+ CCTGCTGCACCGACTTGGGGATCAACACGCGCTC
rJMCP009D02+ CCAggacCtggcAgacGGGAtTCAGCACGCGgagatagggcTcGtactacggcagGGctg
JMCP009D02- CCACCTGCACCGACTGGGGAATCAGCACGCGCTCTATCCCGTGGATGATGCCGTCGGGAC
JMFS053G11+ CTTGCTGCACCGACTTGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
JMFF044B06+ TGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
JMFF051H13+ GGGC
JMFF043I24+ TGGGGATCAACACGCGCTCGATCCCGTGGATGATGCCGTCGGGGC
JMFF051H12+ GATGATGCCGTCGGGGC
                      ____________________________________________________________
consensus CCACCTGCACCGACTTGGGGATCAACACGCGCTCTATCCCGTGGATGATGCCGTCGGGGC
 
. : . : . : . : . : . :
rJMCP009D02+ GGACAtgGagcTCG
JMCP009D02- GGACAACGTCGTCG
JMFS053G11+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
JMFF044B06+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
JMFF051H13+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTTTCCGACACAACGA
JMFF043I24+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
JMFF051H12+ GAACGACGTCGTCGAGGGAAACAACCTTCGCGCGNCTCACCTCCCTTTCNGACACAACGA
                      ____________________________________________________________
consensus GAACGACGTCGTCGAGGGAAACAACCTTCGCGCCGCTCACCTCCCTCTCCGACACAACGA
 
. : . : . : . : . : . :
JMFS053G11+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF044B06+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF051H13+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF043I24+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF022L19+ GGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF051H12+ GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
JMFF050B16+ GCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
                      ____________________________________________________________
consensus GATTCTCCCCTCCGGCGTCGCGGCACAGAGTTATATGATTCCGGCCGCCCCGCCGCGAGT
 
. : . : . : . : . : . :
JMFS053G11+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF044B06+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF051H13+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF043I24+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF022L19+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF051H12+ TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
JMFF050B16+ TTCCGGGCCAGTGTTGGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
                      ____________________________________________________________
consensus TTTCCGGCCAGTGTTTGGACTCAATGCGAGTGGGAATCATGTGGAAGAGAAGGAGATTCT
 
. : . : . : . : . : . :
JMFS053G11+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF044B06+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF051H13+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF043I24+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF022L19+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF051H12+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
JMFF050B16+ GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
                      ____________________________________________________________
consensus GCAGGGACCTGAGATTCCCAGGCTGAAGCAAGAAGCGCTTGAACTCCGGGTCCAAATCCC
 
. : . : . : . : . : . :
JMFS053G11+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGGGCCGGGAAACAG
JMFF044B06+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF051H13+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF043I24+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF022L19+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMFF051H12+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
JMSF005G22+ GGCGCAAAAATGGTGATATTGTGGCGGGAAACAGCTTCCT
JMFF050B16+ GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
                      ____________________________________________________________
consensus GCTCCAAAGCCTCATTCCTGGGCGCAAAAATGGTGATATTGTGCCGGGAAACAGCTTCCT
 
. : . : . : . : . : . :
JMFF044B06+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF051H13+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF043I24+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF022L19+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMFF051H12+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
JMSF005G22+ CGAGAGTCTGCAGCAAAAGCGCCTTCTCCACGAGCTCAGACAGCTCGGTATAATGCGAAT
JMFF050B16+ CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
                      ____________________________________________________________
consensus CAAGAGTCTGGAGAAGAAGCGCCTTCTCCACCAGCTCCGACAGCTCCGTGTAGTGCGAAT
 
. : . : . : . : . : . :
JMFF044B06+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF051H13+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF043I24+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF022L19+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMFF051H12+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
JMSF005G22+ CCAGAAGCGCCACCAACACCGAGTTAGAATTGATCTGAGC
JMFF050B16+ CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
                      ____________________________________________________________
consensus CCAGAAGGGCCACCAACACCGAGTTGGAATTGATCTGAGCGCCGGAGCTGAGATTTCTTG
 
. : . : . : . : . : . :
JMFF044B06+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF051H13+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF043I24+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF022L19+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF051H12+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
JMFF050B16+ ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
                      ____________________________________________________________
consensus ATGGGTTTTCGTGCAATGCTGCGCCACCCACTAACCCAAACACCAACAAAAACACACTAA
 
. : . : . : . : . : . :
JMFF044B06+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF051H13+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF043I24+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF022L19+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF051H12+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
JMFF050B16+ AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
                      ____________________________________________________________
consensus AACACAACAGCTTGCTCAGGCCAAAGATCTGAGCATCCATGGCCGCTCGCTGTAGATTAA
 
. : . : . : . : . : . :
JMFF044B06+ TTGATTGCAGATTTGCACAACACCACACTACT
JMFF051H13+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF043I24+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF022L19+ TTGATTGCAGATTTGCACAACACCACACT
JMFF051H12+ TTGATTGCAGATTTGCACAACACCACACTACTCTCT
JMFF050B16+ TTGATTGCAGATTTGCACAACACCACACTACTCTCTATCTCTCTCTCTCTCTTTCTCTCT
                      ____________________________________________________________
consensus TTGATTGCAGATTTGCACAACACCACACTACTCTCTATCTCTCTCTCTCTCTTTCTCTCT
 
. : . : . : . : . : . :
JMFF050B16+ TTAATATGGTGTGGGATAATGGGGAAGAAGAGCTGTATGTGTGGCAATTTGGTTGTATCC
                      ____________________________________________________________
consensus TTAATATGGTGTGGGATAATGGGGAAGAAGAGCTGTATGTGTGGCAATTTGGTTGTATCC