Contig 000282:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF050A14Sequence443000282 (2)ref|XP_007150518.1|1e-07hypothetical protein PHAVU_005G159100g [Phaseolus vulgaris] ref|XP_007150519.1| 413000282 (2)ref|XP_007150518.1|3e-07hypothetical protein PHAVU_005G159100g [Phaseolus vulgaris] ref|XP_007150519.1|

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+                                                        CCGGGCTGAAAACG
JMFF050A14-                                                TTAAAGCCGCCGGGCTGAAAACG
                      ____________________________________________________________
consensus                                                  TTAAAGCCGCCGGGCTGAAAACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          AAGAGAGTTGGTATCAGAGTAACTTGCGACGACATTCGCGTCGCTGCTCCGGCCAAAAAG
JMFF050A14-           AAGAGAGTTGGTATCAGAGTAACTTGCGACGACATTCGCGTCGCTGCTCCGGCCAAAAAG
                      ____________________________________________________________
consensus             AAGAGAGTTGGTATCAGAGTAACTTGCGACGACATTCGCGTCGCTGCTCCGGCCAAAAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          TCGCCGTGGAAAGCCCCCATTCCGAACGACAAGTGTAACGTTGATGTCAGGTTCAAGATT
JMFF050A14-           TCGCCGTCGAAAGCCACCATTCCGAACGACAAGTGTAACGTTGATGTCAGGTTCAAGATC
                      ____________________________________________________________
consensus             TCGCCGTGGAAAGCCCCCATTCCGAACGACAAGTGTAACGTTGATGTCAGGTTCAAGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          TGGAAATGGAACTTTTGAATACGAGTTTAAATTTCCAAAAAAAAAAAAAAAAACGGGTTG
JMFF050A14-           TGGAAATGGAACTTTTGAATACGAGTTTAAATCTACAAAAAAAAAAAAAAAAACGGGTTG
                      ____________________________________________________________
consensus             TGGAAATGGAACTTTTGAATACGAGTTTAAATTTCCAAAAAAAAAAAAAAAAACGGGTTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          ATTTTTGTTCTACACAAACACAATAATTCTTTTTTTGTTAGAACAAAGAAGAATTTTGTT
JMFF050A14-           ATTTTTGTTCTACACAAACACAATAATTCTTTTTTTGTTAGAACAAAGAAGAATTTTGTT
                      ____________________________________________________________
consensus             ATTTTTGTTCTACACAAACACAATAATTCTTTTTTTGTTAGAACAAAGAAGAATTTTGTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          GTAATGATACACATACACATATACACATACGTGTAATTGGGTTTTGTGCAGTGTTTAGGA
JMFF050A14-           GTAATGATACACATACACATATACACATACGTGTAATTGGGTTTTGTGCAGTGTTTAGGA
                      ____________________________________________________________
consensus             GTAATGATACACATACACATATACACATACGTGTAATTGGGTTTTGTGCAGTGTTTAGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          TTTGAAGGTGTGATTCCTGCTTTAGATATTGTGCTTTGTGGAAAAAAGTTTGTACAAATG
JMFF050A14-           TTTGAAGGTGTGATTCCTGCTTTAGATATTGTGCTTTGTGGAAAAAAGTTTGTACAAATG
                      ____________________________________________________________
consensus             TTTGAAGGTGTGATTCCTGCTTTAGATATTGTGCTTTGTGGAAAAAAGTTTGTACAAATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF050A14+          CCAAATTAAATTGTTGCAAGACTCAACTTGGTTTGCTTC                     
JMFF050A14-           CCAAATTAAATTGTTGCAAGACTCAACTTGGTTTGCTTCXXXXXXXXXXXXXXXXXXXXG
                      ____________________________________________________________
consensus             CCAAATTAAATTGTTGCAAGACTCAACTTGGTTTGCTTCNNNNNNNNNNNNNNNNNNNNG