| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028J04 | Sequence | 557 | 000271 (9) | ref|XP_009798243.1| | 2e-38 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] | 749 | 000271 (9) | ref|XP_011080051.1| | 95.5 | PREDICTED: uncharacterized protein LOC105163419 [Sesamum indicum] |
| JMFF031K03 | Sequence | 615 | 000271 (9) | ref|XP_009798243.1| | 4e-38 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] | 762 | 000271 (9) | ref|XP_009798243.1| | 1e-37 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] |
| JMFF048E04 | Sequence | 482 | 000271 (9) | ref|XP_011080051.1| | 95.9 | PREDICTED: uncharacterized protein LOC105163419 [Sesamum indicum] | 319 | 000271 (9) | |||
| JMSF040H18 | Sequence | 365 | 000271 (9) | ref|XP_009798243.1| | 9e-23 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] | 854 | 019405 | |||
| JMSF050G19 | Sequence | 706 | 000271 (9) | ref|XP_009798243.1| | 8e-38 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] | 756 | 000271 (9) | ref|XP_009798243.1| | 1e-37 | PREDICTED: 54S ribosomal protein L34, mitochondrial [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF048E04- ACCCTGGAGAGTTTTTTTTTTTTTTTGGAAAATATTTCTGTTTATTCTAC
rJMFF028J04- TTCTAC
rJMFF031K03- TTCTAC
____________________________________________________________
consensus ACCCTGGAGAGTTTTTTTTTTTTTTTGGAAAATATTTCTGTTTATTCTAC
. : . : . : . : . : . :
rJMFF048E04- CAACTTATAACAGTTTCTGATTTTGCATCATGCATACATCAAGATGAAAAAGGGTGAAAA
rJMFF028J04- CAACTTATAACAGTTTCTGATTTTGCATCATGCATACATCAAGATGAAAAAGGGTGAAAA
rJMFF031K03- CAACTTATAACAGTTTCTGATTTTGCATCATGCATACATCAAGATGAAAAAGGGTGAAAA
rJMSF050G19- GTTTCTGATTTTGCATCATGCATACATCAAGATGAAAAAGGGTGAAAA
____________________________________________________________
consensus CAACTTATAACAGTTTCTGATTTTGCATCATGCATACATCAAGATGAAAAAGGGTGAAAA
. : . : . : . : . : . :
rJMFF048E04- GTCACTGCCATGGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
rJMFF028J04- GTCACTGCCATGGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
rJMFF031K03- GTCACTGCCATGGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
rJMSF050G19- GTCACTGCCATGGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
JMSF050G19+ GGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
____________________________________________________________
consensus GTCACTGCCATGGCAAAAGAAATACCACCTATCACATAAAAATTACTACAGTTCAAGAAT
. : . : . : . : . : . :
rJMFF048E04- TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
rJMFF028J04- TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
rJMFF031K03- TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
rJMSF050G19- TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
JMFF031K03+ AAGGCAAAGACTAATGATT
JMSF050G19+ TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
____________________________________________________________
consensus TTTGAGCAGCAACATGAAATCCATAAGATTATGAGATGAACAAGGCAAAGACTAATGATT
. : . : . : . : . : . :
rJMFF048E04- AAATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
rJMFF028J04- AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
rJMFF031K03- AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
rJMSF050G19- AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
JMFF028J04+ TGGGCTCGATATTGCACTATA
JMFF031K03+ AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
JMSF050G19+ AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
____________________________________________________________
consensus AGATGCAAGCAGAAACAGGGCAGTGTCTTGGGTGTCGCCTGGGCTCGATATTGCACTATA
. : . : . : . : . : . :
rJMFF048E04- TCAACCTTCTAGTGACCTTAATTGGATCC
rJMFF028J04- TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
rJMFF031K03- TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
rJMSF050G19- TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
JMFF028J04+ TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
JMFF031K03+ TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
JMSF050G19+ TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
JMFF048E04+ TAG
____________________________________________________________
consensus TCAACCTTCTAGTGACCTTAATTGGATCCACAGTTGCAATATGGTGTATTGTTTATGTAG
. : . : . : . : . : . :
rJMFF028J04- CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
rJMFF031K03- CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
rJMSF050G19- CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
JMFF028J04+ CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
JMFF031K03+ CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
JMSF050G19+ CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
JMFF048E04+ CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
____________________________________________________________
consensus CTATACTGCTATTCGTGCACGTCCCTTGGCAATTCTCCGAGCAATAACTCTTCGGCCACC
. : . : . : . : . : . :
rJMFF028J04- CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
rJMFF031K03- CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
rJMSF050G19- CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
JMFF028J04+ CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
JMFF031K03+ CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
JMSF050G19+ CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
JMFF048E04+ CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
____________________________________________________________
consensus CACTGTAGCTTTGCGGGCACGAAATCCATGATTCCTTTTACGCCTGATGTTACTTGGTTG
. : . : . : . : . : . :
rJMFF028J04- GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
rJMFF031K03- GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
rJMSF050G19- GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
JMFF028J04+ GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
JMFF031K03+ GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
JMSF050G19+ GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
JMSF040H18+ C
JMFF048E04+ GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
____________________________________________________________
consensus GTACGTTCTCTTAGTGTGACAAAGAAGTGGTTCACTTGAAGAAGTTTCTCCTGGTGTCAC
. : . : . : . : . : . :
rJMFF028J04- CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
rJMFF031K03- CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
rJMSF050G19- CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
JMFF028J04+ CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
JMFF031K03+ CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
JMSF050G19+ CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
JMSF040H18+ CTCGGGAAGGAAGAAGCGGAGNGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
JMFF048E04+ CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
____________________________________________________________
consensus CTCGGGAAGGAAGAAGCGGAGAGAAGGGAGGCCACAGGGGTACAGAAAACCCTCCGATGA
. : . : . : . : . : . :
rJMFF028J04- GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
rJMFF031K03- GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
rJMSF050G19- GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
JMFF028J04+ GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
JMFF031K03+ GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
JMSF050G19+ GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
JMSF040H18+ GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
JMFF048E04+ GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAACTTAAGCTGAGCCTGAGACTCAGA
____________________________________________________________
consensus GAGCTTTCGGCACAAATCCGCATTGCTTTCGGGCAAATTAAGTGGAGCCTGAGACTCAGA
. : . : . : . : . : . :
rJMFF028J04- GGGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
rJMFF031K03- -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
rJMSF050G19- -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
JMFF028J04+ -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
JMFF031K03+ -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
JMSF050G19+ -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
JMSF040H18+ -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
JMFF048E04+ -GGACTATGGACTGGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
____________________________________________________________
consensus -GGATATGGAA--GGGAAGAGCTTCGGAGTGATCTCCGGAGTCTGAGAAACCAATTGCTG
. : . : . : . : . : . :
rJMFF028J04- TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
rJMFF031K03- TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
rJMSF050G19- TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
JMFF028J04+ TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
JMFF031K03+ TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
JMSF050G19+ TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
JMSF040H18+ TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
JMFF048E04+ TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
____________________________________________________________
consensus TGTATTTCGTGTCGAATTTTGGCTCATCAACCGAGTCATCAAAGAGAAGCTAGTTCGAAT
. : . : . : . : . : . :
rJMFF028J04- GAGAGTTCTCGACGAC
rJMFF031K03- GAGAGTTCTCGACGACGANGACGCCATTGT
rJMSF050G19- GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAG
JMFF028J04+ GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAGCCCT
JMFF031K03+ GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAACCCT
JMSF050G19+ GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAACCCT
JMSF040H18+ GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAACCCT
JMFF048E04+ GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAGCCCTC
____________________________________________________________
consensus GAGAGTTCTCGACGACGAGGACGCCATTGTTTCCCTCAGCAGGAATTTCAGTAAACCCTC