| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030J19 | Sequence | 438 | 000265 (5) | emb|CDP15344.1| | 1e-20 | unnamed protein product [Coffea canephora] | 661 | 002706 (4) | ref|XP_009788755.1| | 1e-93 | PREDICTED: cytochrome P450 76A2-like [Nicotiana sylvestris] |
| JMFF047G12 | Sequence | 360 | 000265 (5) | emb|CDP15344.1| | 6e-10 | unnamed protein product [Coffea canephora] | 351 | 002706 (4) | ref|XP_009788755.1| | 3e-21 | PREDICTED: cytochrome P450 76A2-like [Nicotiana sylvestris] |
| JMSF003O18 | Sequence | 289 | 000265 (5) | emb|CDP15344.1| | 4e-04 | unnamed protein product [Coffea canephora] | 714 | 002706 (4) | ref|XP_009788755.1| | 1e-101 | PREDICTED: cytochrome P450 76A2-like [Nicotiana sylvestris] |
| JMSF009F22 | Sequence | 412 | 000265 (5) | emb|CDP15344.1| | 2e-26 | unnamed protein product [Coffea canephora] | 763 | 002706 (4) | ref|XP_009788755.1| | 2e-101 | PREDICTED: cytochrome P450 76A2-like [Nicotiana sylvestris] |
| JMSF037L24 | Sequence | 662 | 000265 (5) | ref|XP_004246901.1| | 2e-68 | PREDICTED: cytochrome P450 76A2-like [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMSF037L24+ CCGACACAGGATCCACCAAATCGCTGGAAAACATTATGTTTCCCAGCAGGTTGAAT
____________________________________________________________
consensus CCGACACAGGATCCACCAAATCGCTGGAAAACATTATGTTTCCCAGCAGGTTGAAT
. : . : . : . : . : . :
JMSF037L24+ GTTGCCAGGAAAACAAAGCGAGTTACATGAATCCCAGAGCCTCTCTTGATAGAGCCTGCT
____________________________________________________________
consensus GTTGCCAGGAAAACAAAGCGAGTTACATGAATCCCAGAGCCTCTCTTGATAGAGCCTGCT
. : . : . : . : . : . :
JMSF037L24+ TCGTTTTCTACCCACCGGAGCAAATCGTCGATGCATTTTCGCCGGACGGCGGCCGTTTCG
____________________________________________________________
consensus TCGTTTTCTACCCACCGGAGCAAATCGTCGATGCATTTTCGCCGGACGGCGGCCGTTTCG
. : . : . : . : . : . :
JMSF009F22+ TAT
JMSF037L24+ TTCACCTTCTTGTGCACGAACATTTCCACGGAGCATATCCGCCTTAACACCCGCCAGTAT
____________________________________________________________
consensus TTCACCTTCTTGTGCACGAACATTTCCACGGAGCATATCCGCCTTAACACCCGCCAGTAT
. : . : . : . : . : . :
JMSF009F22+ GATCCATACTGGGCTAGCGCCATGGACCCCTTGTTGTAACCNTGCGCCAGCATGACGTCG
JMSF037L24+ GATCCATACTGGGCTAGCGCCATGGACCCCTTGTTGTAACCCTGCGCCAGCATGACGTCG
JMFF030J19+ TGCGCCAGCATGACGTCG
____________________________________________________________
consensus GATCCATACTGGGCTAGCGCCATGGACCCCTTGTTGTAACCCTGCGCCAGCATGACGTCG
. : . : . : . : . : . :
JMSF009F22+ CCGATGCTGCGGCCGGCGAATGGGACGTCGTGGTTCTTGAAGAGCTCGGCGGCGGCCTTG
JMSF037L24+ CCGATGCTGCGGCCGGCGAATGGGACGTCGTGGTTCTTGAAGAGCTCGGCGGCGGCCTTG
JMFF030J19+ CCGATGCTGCGGCCGGCGAATGGGACGTCGTGGTTCTTGAAGAGCTCGGCGGCGGCCTTG
____________________________________________________________
consensus CCGATGCTGCGGCCGGCGAATGGGACGTCGTGGTTCTTGAAGAGCTCGGCGGCGGCCTTG
. : . : . : . : . : . :
JMSF009F22+ GCCGACTGGATTGCCAGGGTGCTGACGGAGCCTATCCTTAGCCAAACCACAGGCCCGTAC
JMSF037L24+ GCCGACTGGATTGCCAGGGTGCTGACGGAGCCTATCCTTAGCCAAACCACAGGCCCGTAC
JMSF003O18+ CCAAACCACAGGCCCGTAC
JMFF030J19+ GCCGACTGGATTGCCAGGGTGCTGACGGAGCCTATCCTTAGCCAAACCACAGGCCCGTAC
JMFF047G12+ GCCGACTGGATGCCCAGGGTGCTGACGGAGCCTATCCTTAGCCAAACCACAGGCCCGTAC
____________________________________________________________
consensus GCCGACTGGATTGCCAGGGTGCTGACGGAGCCTATCCTTAGCCAAACCACAGGCCCGTAC
. : . : . : . : . : . :
JMSF009F22+ TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
JMSF037L24+ TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
JMSF003O18+ TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
JMFF030J19+ TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
JMFF047G12+ TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
____________________________________________________________
consensus TTGTTTCTCATCGCGGCTATTGTTTGGTGTGGTACTGATCCGAGGTCCAACATGTTGCCC
. : . : . : . : . : . :
JMSF009F22+ AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
JMSF037L24+ AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
JMSF003O18+ AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
JMFF030J19+ AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
JMFF047G12+ AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
____________________________________________________________
consensus AACACGGGCAGCCCAGGTGGTCCCGGCGGCAGTCTGCCGGAGCGTGACTTGTTCCGGGAG
. : . : . : . : . : . :
JMSF009F22+ ATTAGAAGGAGCAAAGCCGCCGGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
JMSF037L24+ ATTAGAAGGAGCAAAGCCGCCGGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
JMSF003O18+ ATTAGAAGGAGCAAAGCCGCCGGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
JMFF030J19+ ATTAGAAGGAGCAAAGCCGCCGGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
JMFF047G12+ ATTAGAAGGAGCAAAGCCGCCTGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
____________________________________________________________
consensus ATTAGAAGGAGCAAAGCCGCCGGGATCAAGAAGGCCGCGGACAAGATGATGATGTATCTC
. : . : . : . : . : . :
JMSF009F22+ CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTT
JMSF037L24+ CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTTGGAAATTGCAGG
JMSF003O18+ CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTTGGAAATTGCAGG
JMFF030J19+ CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTTGGAAATTGCAGG
JMFF047G12+ CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTTGGAAATTGCAGG
____________________________________________________________
consensus CCATCCCAGTACTCCATCTCTTGCAAGCTAACTAAAGCTAGTGGTCTTGGAAATTGCAGG
. : . : . : . : . : . :
JMSF037L24+ CGGCT
JMSF003O18+ CGGCTAAACCAACGGTATTTAAAAGAA
JMFF030J19+ CGGCTAAACCAACGGTATTTAAAAGAATCATTAAATAAGGAAAGTTTGAGATGGGATATT
JMFF047G12+ CGGCTAAACCAACGGTATTTAAAAGAATCATTAAATAAGGAAAGTTTGAGATGGGATATT
____________________________________________________________
consensus CGGCTAAACCAACGGTATTTAAAAGAATCATTAAATAAGGAAAGTTTGAGATGGGATATT