| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007N06 | Sequence | 572 | 000263 (23) | emb|CDP04484.1| | 1e-88 | unnamed protein product [Coffea canephora] | 777 | 000263 (23) | ref|XP_009593985.1| | 6e-113 | PREDICTED: ER membrane protein complex subunit 3 [Nicotiana tomentosiformis] |
| JMFF018D15 | Sequence | 568 | 000263 (23) | emb|CDP04484.1| | 5e-87 | unnamed protein product [Coffea canephora] | 731 | 000263 (23) | ref|XP_009786103.1| | 5e-103 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
| JMFF021J01 | Sequence | 566 | 000263 (23) | gb|KDP26955.1| | 7e-125 | hypothetical protein JCGZ_22252 [Jatropha curcas] | 648 | 020184 | emb|CBI33106.3| | 2e-68 | unnamed protein product [Vitis vinifera] emb|CBI33111.3| unnamed protein product |
| JMFF035B13 | Sequence | 468 | 000263 (23) | emb|CDP04484.1| | 2e-66 | unnamed protein product [Coffea canephora] | 733 | 000263 (23) | ref|XP_009786103.1| | 5e-103 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
| JMFF047C09 | Sequence | 522 | 000263 (23) | emb|CDP04484.1| | 9e-57 | unnamed protein product [Coffea canephora] | 367 | 000263 (23) | gb|EYU27700.1| | 1e-08 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] |
| JMFF049M18 | Sequence | 599 | 000263 (23) | emb|CDP04484.1| | 8e-95 | unnamed protein product [Coffea canephora] | 608 | 023415 | gb|EYU27700.1| | 4e-62 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] |
| JMSF001D21 | Sequence | 307 | 000263 (23) | emb|CDP04484.1| | 4e-50 | unnamed protein product [Coffea canephora] | 701 | 000263 (23) | ref|XP_009786103.1| | 2e-102 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
| JMSF001J05 | Sequence | 344 | 000263 (23) | emb|CDP04484.1| | 6e-57 | unnamed protein product [Coffea canephora] | 704 | 000263 (23) | ref|XP_009786103.1| | 2e-102 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
| JMSF003F17 | Sequence | 409 | 014062 (5) | 151 | 000263 (23) | gb|EYU27700.1| | 2e-14 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] | |||
| JMSF009F13 | Sequence | 377 | 000263 (23) | gb|EYU27700.1| | 9e-11 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] | 341 | 000263 (23) | gb|EYU27700.1| | 7e-11 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] |
| JMSF010F13 | Sequence | 377 | 000263 (23) | gb|EYU27700.1| | 6e-08 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] | 336 | 000263 (23) | gb|EYU27700.1| | 6e-11 | hypothetical protein MIMGU_mgv1a012576mg [Erythranthe guttata] |
| JMSF023F03 | Sequence | 684 | 000263 (23) | emb|CDP04484.1| | 1e-138 | unnamed protein product [Coffea canephora] | 760 | 000263 (23) | ref|XP_009786103.1| | 2e-115 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
| JMSF033M02 | Sequence | 675 | 000263 (23) | emb|CDP04484.1| | 7e-141 | unnamed protein product [Coffea canephora] | 704 | 000263 (23) | ref|XP_009786103.1| | 2e-102 | PREDICTED: ER membrane protein complex subunit 3-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMFF047C09- TGCAAAAGAATATCTC
JMSF010F13+ TGCAAAAGAATATCTC
JMSF009F13+ GATGCAAAAGAATATCTC
rJMFF018D15- TCTC
rJMFF035B13- TATCTC
rJMFF007N06- TCTC
____________________________________________________________
consensus GATGCAAAAGAATATCTC
. : . : . : . : . : . :
rJMFF047C09- TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
JMSF010F13+ TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
JMSF009F13+ TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
rJMFF018D15- TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF001D21- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF001J05- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF033M02- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF010F13- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF009F13- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
rJMFF035B13- TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
rJMFF007N06- TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
rJMSF023F03- GTCTTCACCAAAACAATACTCAGATAGTCAGATCAGC
____________________________________________________________
consensus TTTAGTGTATAATGTATATGCAGTCTTCAACCAAAACAATACTCAGATAGTCAGATCAGC
. : . : . : . : . : . :
rJMFF047C09- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
JMSF010F13+ AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
JMSF009F13+ AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMFF018D15- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF001D21- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF001J05- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF033M02- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF010F13- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF009F13- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMFF035B13- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMFF007N06- AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
rJMSF023F03- AAATATGATCAAAATCACTAGTGTACAACAAT--TGTGAATTGCCATTTGGCCATTATGG
____________________________________________________________
consensus AAATATGATCAAAATCACTAGTGTACAACAATTGTGTGAATTGCCATTTGGCCATTATGG
. : . : . : . : . : . :
rJMFF047C09- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
JMSF010F13+ GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
JMSF009F13+ GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMFF018D15- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF001D21- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF001J05- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF033M02- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF010F13- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF009F13- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMFF035B13- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMFF007N06- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
rJMSF023F03- GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
____________________________________________________________
consensus GGGTAAGAACTATCTTTTCAATGAAACGAATAGATATCTGTTGCGTGAATTCACGAGCTC
. : . : . : . : . : . :
rJMFF047C09- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
JMSF010F13+ AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
JMSF009F13+ AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMFF018D15- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF001D21- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF001J05- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF033M02- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF010F13- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF009F13- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMFF035B13- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMFF007N06- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
rJMSF023F03- AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
____________________________________________________________
consensus AATGTCTGCACATTCAAAGGCGAACCTAGGGAAGAAGCATAAGTGTGGAGATAAACTAAG
. : . : . : . : . : . :
rJMFF047C09- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
JMSF010F13+ TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTNGAA
JMSF009F13+ TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMFF018D15- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF001D21- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF003F17- TTTCCTNAAGACAGCTTNAANTCGTTGCNCGAA
rJMSF001J05- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF033M02- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF010F13- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF009F13- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMFF035B13- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMFF007N06- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
rJMSF023F03- TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
____________________________________________________________
consensus TTATGTATAAAATCAGCCGTTGACCAGTTTCCTCAAGACAGCTTCAGCTCGTTGCTCGAA
. : . : . : . : . : . :
rJMFF047C09- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCC
JMSF010F13+ TTTAGGCAGTGCCCAATCGTGNTGCGCTATATNTAAATTGTCCTTTTCCGCGCCCAAGC
JMSF009F13+ TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGC
rJMFF018D15- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMSF001D21- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMSF003F17- TTTAAGNACTGCCCANTCGTGCTGCGCTATATCNAAATTGTCCTTTTCNGCGCCCNAGCT
rJMSF001J05- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMSF033M02- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMSF010F13- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGC
rJMSF009F13- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGC
rJMFF035B13- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMFF007N06- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
rJMSF023F03- TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
____________________________________________________________
consensus TTTAGGCAGTGCCCAATCGTGCTGCGCTATATCTAAATTGTCCTTTTCCGCGCCCAAGCT
. : . : . : . : . : . :
rJMFF018D15- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMSF001D21- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMSF003F17- CTTTGAGGGGTCANAACCAANTCCCCTCATTTGCATCATGCGTTGGGTATCATCTG
rJMSF001J05- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMSF033M02- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMFF035B13- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMFF007N06- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
rJMSF023F03- CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
JMSF033M02+ TGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
JMFF021J01+ CATTTGCATCATACGTTGGGTATCATCCATAGC
JMSF023F03+ TCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
____________________________________________________________
consensus CTTTGAGGGGTCAAAACCAAATCCACTCATTTGCATCATGCGTTGGGTATCATCTGTAGC
. : . : . : . : . : . :
rJMFF018D15- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMSF001D21- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMSF001J05- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMSF033M02- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMFF035B13- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMFF007N06- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
rJMSF023F03- ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
JMSF033M02+ ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
JMFF021J01+ ATTTTCCTCTCCAAGAATGAGACTAAACAAACCCCTCAAACCAAAGAGATTGAGGAAGTA
JMSF023F03+ ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
____________________________________________________________
consensus ATTTTCCTCTCCCAGAATGAGACTAAACAAGCCTCTCAATCCAAAAAGATTAAGGAAGTA
. : . : . : . : . : . :
rJMFF018D15- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMSF001D21- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMSF001J05- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMSF033M02- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMFF035B13- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMFF007N06- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
rJMSF023F03- CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
JMSF033M02+ CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
JMFF021J01+ CCATGAGCGACTACTAACATAGCTCACATCAACAGTACTCAAATCAATTCCGTTTTGTAA
JMSF023F03+ CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
JMFF049M18+ A
____________________________________________________________
consensus CCATGAACGGCTGCTAACATAGCTGACGTCAACGGTACTCAAGTCGATTCCATTTTGCAA
. : . : . : . : . : . :
rJMFF018D15- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMSF001D21- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMSF001J05- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMSF033M02- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMFF035B13- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMFF007N06- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
rJMSF023F03- CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMSF033M02+ CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMFF035B13+ TGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMFF021J01+ CATTGACCTGAACCTTTGAGTTAACGGAAAAGGTATCTTTGCTGCTACGAACCCAGAGAA
JMSF023F03+ CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMFF007N06+ ATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMFF018D15+ AATGGTATTTTTGCTGCTACAAACCCAGAGAA
JMFF049M18+ CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
____________________________________________________________
consensus CATTGATCTGAACCTCTGAGTTAATGGAAATGGTATTTTTGCTGCTACAAACCCAGAGAA
. : . : . : . : . : . :
rJMFF018D15- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMSF001D21- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMSF001J05- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMSF033M02- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMFF035B13- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMFF007N06- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
rJMSF023F03- GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMSF033M02+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF035B13+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF021J01+ GAAGAAGTTAACCCATGCAAAAGTAAGAGTCTGAGGTATGATCATTGAGAGATTTTTCTT
JMSF023F03+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF007N06+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF018D15+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF049M18+ GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
JMFF047C09+ TGCAAAAGTAAGGTTCTGAGGTATGATCATCGACAGA-TTTTCTT
____________________________________________________________
consensus GAAGAAGTTAACCCATGCAAAAGTAAGGGTCTGAGGTATGATCATCGACAGATTTTTCTT
. : . : . : . : . : . :
rJMFF018D15- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMSF001D21- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMSF001J05- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMSF033M02- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMFF035B13- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMFF007N06- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
rJMSF023F03- CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMSF033M02+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF035B13+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMSF001J05+ TCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF021J01+ CATCATATCCATAGCCATGTTAGGATCAGAAAACATTTGTGCCTGTGCATTCTGAGCTTG
JMSF023F03+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF007N06+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF018D15+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF049M18+ CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
JMFF047C09+ CATCATATCCATAGCCATG-TGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
____________________________________________________________
consensus CATCATATCCATAGCCATGTTGGGATCAGAAAGCATTTGTGCCTGTGGATTCTGATCCTG
. : . : . : . : . : . :
rJMFF018D15- CCCTTTA
rJMSF001D21- CCCT
rJMSF001J05- CCCT
rJMSF033M02- CCCTT
rJMFF035B13- CCCTTTA
rJMFF007N06- CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCC
rJMSF023F03- CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMSF033M02+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF035B13+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAATAAAAACCTCCGTGCTC
JMSF001J05+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF021J01+ GTCTTTAGGAACAAAAAGCAACCCATTTTCCTCGTTGCTATAAT-AAAGCCGTCGTGTTC
JMSF001D21+ CTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMSF023F03+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF007N06+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF018D15+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF049M18+ CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
JMFF047C09+ CCCTNTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
____________________________________________________________
consensus CCCTTTAGGAACAAAGAGTAACCCATTTTCCTCATTGCTGTAAT-AAAACCTCCGTGCTC
. : . : . : . : . : . :
rJMSF023F03- TA
JMSF033M02+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF035B13+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMSF001J05+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF021J01+ GAAACGACTTTGCAGGAATAAAATTAGCGCCGGCTCTCAAATTCCTTGCCCTAATTATCA
JMSF001D21+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMSF023F03+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF007N06+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF018D15+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF049M18+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
JMFF047C09+ TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
____________________________________________________________
consensus TAAAAGACTTCGCGGGAATCAAATTACCACTGGCTCTCAAATTCCTTGCCCTAATTATCA
. : . : . : . : . : . :
JMSF033M02+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF035B13+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMSF001J05+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF021J01+ CCTGCCCTTCTTTGACGATTTTAGCATCTGGTAACTGAGA
JMSF001D21+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMSF023F03+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF007N06+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF018D15+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF049M18+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
JMFF047C09+ CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
____________________________________________________________
consensus CCTGCCCTTCTTTGACGATTTTAGCATCGGGTAGCTGAGAAGAAGATGAGCGCATGAGCT
. : . : . : . : . : . :
JMSF033M02+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMFF035B13+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMSF001J05+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMSF001D21+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMSF023F03+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMFF007N06+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMFF018D15+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMFF049M18+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
JMFF047C09+ TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
____________________________________________________________
consensus TGGAGACGAAGTAGCGGAGGATTCCGATGAGTACCATCACCACCGATAGCGGTATCAGCA
. : . : . : . : . : . :
JMSF033M02+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMFF035B13+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMSF001J05+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMSF001D21+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMSF023F03+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMFF007N06+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMFF018D15+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMFF049M18+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
JMFF047C09+ CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
____________________________________________________________
consensus CCCAGTCTCTGATTGCAGTGTCCAATACCAAATCTTCCGCCATCTCTTTCCCGCTGTCTC
. : . : . : . : . : . :
JMSF033M02+ TCTGCTTCTGAGGAATTC
JMFF035B13+ TCT
JMSF001J05+ TCTGCTTCT
JMSF001D21+ TCTGCTTCT
JMSF023F03+ TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTC
JMFF007N06+ TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTCAATTCTCATATGTATTGGGCATTGGG
JMFF018D15+ TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTCAATTCTCATATGTATTGGGCATTGGG
JMFF049M18+ TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTCAATTCTCATATGTATTGGGCATTGGG
JMFF047C09+ TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTCAATTCTCATATGTATTGGGCATTGGG
____________________________________________________________
consensus TCTGCTTCTGAGGAATTCAGAATCTCGGATTCTCAATTCTCATATGTATTGGGCATTGGG
. : . : . : . : . : . :
JMFF007N06+ AAATCAGATGATTCGGGTATTCGGGTCCCAGATCTCATGATTCAACAAGACAACA
JMFF018D15+ AAATCAGATGATTCGGGTATTCGGGTCCCAGATCTCATGATTCAACAAGACAACA
JMFF049M18+ AAATCAGATGATTCGGGTATTCGGGTCCCAGATCTCATGATTCAACAAGACAACA
JMFF047C09+ AAATCAGATGATTCGGGTATTCGGGTCCCAGATCTCATGATTCAACAAGACAACAACCGG
____________________________________________________________
consensus AAATCAGATGATTCGGGTATTCGGGTCCCAGATCTCATGATTCAACAAGACAACAACCGG