Contig 000262:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF047P11+                                               CCGTCACTCCCTTCAATATAGAGA
                      ____________________________________________________________
consensus                                                 CCGTCACTCCCTTCAATATAGAGA
 
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JMSF047P11+           CTGCGGAGGAGCCGAATCTTTGGGGCTTCAAAAGAAAGCATTTCAAAGTTTGCTTTTTCA
                      ____________________________________________________________
consensus             CTGCGGAGGAGCCGAATCTTTGGGGCTTCAAAAGAAAGCATTTCAAAGTTTGCTTTTTCA
 
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JMSF047P11+           CCCATGTCCAAGTTTGAACTGAATTTCTCCTGCAATGGAGAAGGGGACAAATGGGTATGG
                      ____________________________________________________________
consensus             CCCATGTCCAAGTTTGAACTGAATTTCTCCTGCAATGGAGAAGGGGACAAATGGGTATGG
 
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JMSF047P11+           AGTTTGGTTTCTTCCAAAGCATAATGAACAAAGTTTCTGTATGTAAAAGCTGCGGCTGAG
                      ____________________________________________________________
consensus             AGTTTGGTTTCTTCCAAAGCATAATGAACAAAGTTTCTGTATGTAAAAGCTGCGGCTGAG
 
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JMSF047P11+           GCTTTGTGACTTATACTCCTAATATTACAAGGTTTGAATCTTCTTTTTCTATGCAAAATG
JMFF047B08+                                                                 AAAATG
                      ____________________________________________________________
consensus             GCTTTGTGACTTATACTCCTAATATTACAAGGTTTGAATCTTCTTTTTCTATGCAAAATG
 
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JMSF047P11+           GCAATAAATTTGGCACTCCCTCCACCTCTTGTTAGTGGTAGATTCAGGGGCGGAATCAAG
JMFF047B08+           GCAATAAATTTGGCACTCCCTCCACCTCTTGTTAGTGGTAGATTCAGGGGCGGAATCAAG
                      ____________________________________________________________
consensus             GCAATAAATTTGGCACTCCCTCCACCTCTTGTTAGTGGTAGATTCAGGGGCGGAATCAAG
 
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JMSF047P11+           GTTGCTGACCATGAAGAAAAACATGATTCCATTGAAGAAGAAAAAGAATCCAAGAATGGA
JMFF047B08+           GTTGCTGACCATGAAGAAAAACATGATTCCATTGAAGAAGAAAAAGAATCCAAGAATGGA
                      ____________________________________________________________
consensus             GTTGCTGACCATGAAGAAAAACATGATTCCATTGAAGAAGAAAAAGAATCCAAGAATGGA
 
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JMSF047P11+           AGAGGTGATTCAGAGCTCCATTTGGATAGTGCTTTGTGCTCGACCCAATGGGGAAGGCAT
JMFF047B08+           AGAGGTGATTCAGAGCTCCATTTGGATAGTGCTTTGTGCTCGACCCAATGGGGAAGGCAT
                      ____________________________________________________________
consensus             AGAGGTGATTCAGAGCTCCATTTGGATAGTGCTTTGTGCTCGACCCAATGGGGAAGGCAT
 
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JMSF047P11+           AGTCAGAAGAATCTCTTATCCAAAGTATCTCCACTCCACAATTTCCTTTGTTTACCGCTG
JMFF047B08+           AGTCAGAAGAATCTCTTATCCAAAGTATCTCCACTCCACAATTTCCTTTGTTTACCGCTG
                      ____________________________________________________________
consensus             AGTCAGAAGAATCTCTTATCCAAAGTATCTCCACTCCACAATTTCCTTTGTTTACCGCTG
 
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JMSF047P11+           TCCTTGCAAATGGATTTTTTGTTTTGCCCGCCAGGGTCACCACTTAATTACGCTTTCTAG
JMFF047B08+           TCCTTGCAAATGGATTTTTTGTTTTGCCCGCCAGGGTCACCACTTAATTACGCTTTCTAG
                      ____________________________________________________________
consensus             TCCTTGCAAATGGATTTTTTGTTTTGCCCGCCAGGGTCACCACTTAATTACGCTTTCTAG
 
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JMSF047P11+           TCTCTGGTTTCTACCTATTTCT                                      
JMFF047B08+           TCTCTGGTTTCTACCTATTTCTTGAAGATGCTTCTGCCTCATGGATTTAAAGATCCTAAC
                      ____________________________________________________________
consensus             TCTCTGGTTTCTACCTATTTCTTGAAGATGCTTCTGCCTCATGGATTTAAAGATCCTAAC
 
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JMFF047B08+           AACCTATCGAGCTTCAATTTCAATGGTTGAAAAAGTGGGGGAAAAAATGAGGCGCTTAAA
                      ____________________________________________________________
consensus             AACCTATCGAGCTTCAATTTCAATGGTTGAAAAAGTGGGGGAAAAAATGAGGCGCTTAAA
 
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JMFF047B08+           CCCTAAATTGTGCTTCAGGCCTTCATTGAAAAGAAGTTGTGGCAAGGGAGACATAATCTT
                      ____________________________________________________________
consensus             CCCTAAATTGTGCTTCAGGCCTTCATTGAAAAGAAGTTGTGGCAAGGGAGACATAATCTT