Contig 000261:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046O12-                                         AAATTTTGAACACTGAGATGAATCATTAT
                      ____________________________________________________________
consensus                                            AAATTTTGAACACTGAGATGAATCATTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046O12-          TGAGTTGATCTGTAATCAAATCACTTGAAATGTAAGTTTGTGCATTTAAAATACTGTATC
                      ____________________________________________________________
consensus             TGAGTTGATCTGTAATCAAATCACTTGAAATGTAAGTTTGTGCATTTAAAATACTGTATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046O12-          TACAATGAGTGCTTACAATTACAACTTCACTCCTAGCATTTGAGCCTTCTGGACTTGAAA
JMSF050M06+                                                         TTCTGGACTTGAAA
                      ____________________________________________________________
consensus             TACAATGAGTGCTTACAATTACAACTTCACTCCTAGCATTTGAGCCTTCTGGACTTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046O12-          TGCGAAAAAAATCACTTCACTGGACTAAAAAATTTCAAACCCTAGTTCGAGCGGGTTGCG
JMSF050M06+           TGCGAAGAAAATCACTTCACTGGACTAGAAGATTTCAAACCCTAGTTCGAGCGGGTTGCG
                      ____________________________________________________________
consensus             TGCGAAGAAAATCACTTCACTGGACTAGAAGATTTCAAACCCTAGTTCGAGCGGGTTGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF046O12-          TGGTAGCACCGGCGAAAGAGAGCAATCCGCCCTGCGTAGCTTCATCTTCGT         
JMSF050M06+           TGGTAGCACCGGCGAAAGAGAGCAATCCGCCCTGCGTAGCTTCATCTTCGTTGAGGTAAA
                      ____________________________________________________________
consensus             TGGTAGCACCGGCGAAAGAGAGCAATCCGCCCTGCGTAGCTTCATCTTCGTTGAGGTAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           GATCATCGTTGACTCTAAACGCCGCGTGTAAAGCAACGATCGCCGCTCCAATCAGAACCG
                      ____________________________________________________________
consensus             GATCATCGTTGACTCTAAACGCCGCGTGTAAAGCAACGATCGCCGCTCCAATCAGAACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           ACACCAGAACGTTGAGCCATACGCGAGTGAACACCAAGCAGACCACCGTGAGCACGCTGA
JMFF046O12+               CAGAACGTTGAGCCATACGCGAGTGAACACCAAGCAGACCACCGTGAGCACGCTGA
                      ____________________________________________________________
consensus             ACACCAGAACGTTGAGCCATACGCGAGTGAACACCAAGCAGACCACCGTGAGCACGCTGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           GAACCGCCATCACAACCCTATCGTCGACCGTGCGACTGAATATCACGAGCGGTCCGTCGC
JMFF046O12+           GAACCGCCATCACAACCCTATCGTCGACCGTGCGACTGAATATCACGAGCGGTCCGTCGC
                      ____________________________________________________________
consensus             GAACCGCCATCACAACCCTATCGTCGACCGTGCGACTGAATATCACGAGCGGTCCGTCGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           GGAAGAAGTAGAGCAAGAACCAGGCGACGAACAGGACTAAGAAGACAATCATGGAGAGCG
JMFF046O12+           GGAAGAAGTAGAGCAAGAACCAGGCGACGAACAGGACTAAGAAGACAATCATGGAGAGCG
                      ____________________________________________________________
consensus             GGAAGAAGTAGAGCAAGAACCAGGCGACGAACAGGACTAAGAAGACAATCATGGAGAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           GGTGCCATAGGAGGCTGAGGAAGAGTATGATGAGCATCGTTAGGGCGTAGTTCATGCGGA
JMFF046O12+           GGTGCCATAGGAGGCTGAGGAAGAGTATGATGAGCATCGTTAGGGCGTAGTTCATGCGGA
                      ____________________________________________________________
consensus             GGTGCCATAGGAGGCTGAGGAAGAGTATGATGAGCATCGTTAGGGCGTAGTTCATGCGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           AATAGTTGAGATTCCGGCGGAGGCGAGCGGTGACATCGGCGAAGGTGCGCGGAATGGAGT
JMFF046O12+           AATAGTTGAGATTCCGGCGGAGGCGAGCGGTGACATCGGCGAAGGTGCGCGGAATGGAGT
                      ____________________________________________________________
consensus             AATAGTTGAGATTCCGGCGGAGGCGAGCGGTGACATCGGCGAAGGTGCGCGGAATGGAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           ACAAGGATGGGCGGGCGAAGAGCTCGCGCCATGGCCGCAGAGGAGCGAAGGAGGATAGCG
JMFF046O12+           ACAAGGATGGGCGGGCGAAGAGCTCGCGCCATGGCCGCAGAGGAGCGAAGGAGGATAGCG
                      ____________________________________________________________
consensus             ACAAGGATGGGCGGGCGAAGAGCTCGCGCCATGGCCGCAGAGGAGCGAAGGAGGATAGCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           CCGTGGGTGGGGCCCGGCCGGAGATGTCGGCAGCGGCTGAACTCGACAGGAAAGAATCGT
JMFF046O12+           CCGTGGGTGGGGCCCGGCCGGAGATGTCGGCAGCGGCTGAACTCGACAGGAAAGAATCGT
                      ____________________________________________________________
consensus             CCGTGGGTGGGGCCCGGCCGGAGATGTCGGCAGCGGCTGAACTCGACAGGAAAGAATCGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF050M06+           ACTGATACCC                                                  
JMFF046O12+           ACTGATACCCAACCCTACCCCCACCCCCACCCTGCATTGAAGAAGAAGAATTGAAAAAGA
                      ____________________________________________________________
consensus             ACTGATACCCAACCCTACCCCCACCCCCACCCTGCATTGAAGAAGAAGAATTGAAAAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF046O12+           AGTTGAGACTTGAGAGAAACGACAACCCCAAAACCCTATGCTTAGAAAAAGAAAGCAGCC
                      ____________________________________________________________
consensus             AGTTGAGACTTGAGAGAAACGACAACCCCAAAACCCTATGCTTAGAAAAAGAAAGCAGCC