| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015N11 | Sequence | 539 | 000254 (9) | ref|XP_009795110.1| | 1e-58 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 764 | 006961 (7) | gb|KJB06906.1| | 7e-89 | hypothetical protein B456_001G0323001, partial [Gossypium raimondii] gb|KJB06907 |
| JMFF019M08 | Sequence | 537 | 000254 (9) | ref|XP_009795110.1| | 2e-66 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 794 | 006961 (7) | emb|CDP10235.1| | 3e-96 | unnamed protein product [Coffea canephora] |
| JMFF045H22 | Sequence | 637 | 000254 (9) | ref|XP_009795110.1| | 1e-80 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 574 | 006961 (7) | emb|CDP16585.1| | 3e-45 | unnamed protein product [Coffea canephora] |
| JMSF005L09 | Sequence | 456 | 000254 (9) | ref|XP_009795110.1| | 4e-59 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | |||||
| JMSF007M22 | Sequence | 286 | 000254 (9) | ref|XP_009795110.1| | 5e-26 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 794 | 017076 | emb|CDP10235.1| | 4e-96 | unnamed protein product [Coffea canephora] |
| JMSF010O13 | Sequence | 235 | 000254 (9) | ref|XP_009795110.1| | 5e-24 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 740 | 006961 (7) | emb|CAA68143.1| | 1e-111 | cytosol aminopeptidase [Petroselinum crispum] |
| JMSF036C23 | Sequence | 703 | 000254 (9) | ref|XP_009795110.1| | 6e-101 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 587 | 006961 (7) | gb|KJB06906.1| | 1e-85 | hypothetical protein B456_001G0323001, partial [Gossypium raimondii] gb|KJB06907 |
| JMSF045N11 | Sequence | 765 | 000254 (9) | ref|XP_009795110.1| | 2e-111 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 740 | 006961 (7) | emb|CDP10235.1| | 2e-101 | unnamed protein product [Coffea canephora] |
| JMSF046C13 | Sequence | 724 | 000254 (9) | ref|XP_009795110.1| | 1e-103 | PREDICTED: leucine aminopeptidase 2, chloroplastic [Nicotiana sylvestris] | 745 | 006961 (7) | emb|CAA68143.1| | 1e-109 | cytosol aminopeptidase [Petroselinum crispum] |
This contig is upended
. : . : . : . : . : . :
JMSF046C13+ TTCGGC
JMSF045N11+ AGTAAGAACATCACTGTACAATGAAGCAATATTTTTGGCCTCTTCGGC
____________________________________________________________
consensus AGTAAGAACATCACTGTACAATGAAGCAATATTTTTGGCCTCTTCGGC
. : . : . : . : . : . :
JMSF046C13+ AAGTGCCCCAGGGGTTAGTACATTGGCAGGTGCATTTACAAGCTCTTTCACGAATATCAC
JMSF036C23+ GGTTAGTACATTGGCAGGTGCATTTACAAGCTCTTTCACGAATATCAC
JMSF045N11+ AAGTGCCCCAGGGGTTAGTACATTGGCAGGTGCATTTACAAGCTCTTTCACGAATATCAC
____________________________________________________________
consensus AAGTGCCCCAGGGGTTAGTACATTGGCAGGTGCATTTACAAGCTCTTTCACGAATATCAC
. : . : . : . : . : . :
JMSF046C13+ ACCAGAACTAACAACTTCTGAGTATTTCAGTTTCTTTTCAATCTCGGGTCCAGTTCCAAG
JMSF036C23+ ACCAGAACTAACAACTTCTGAGTATTTCAGTTTCTTTTCAATCTCGGGTCCAGTTCCAAG
JMSF045N11+ ACCAGAACTAACAACTTCTGAGTATTTCAGTTTCTTTTCAATCTCGGGTCCAGTTCCAAG
JMFF045H22+ ATCTCGGGTCCAGTTCCAAG
____________________________________________________________
consensus ACCAGAACTAACAACTTCTGAGTATTTCAGTTTCTTTTCAATCTCGGGTCCAGTTCCAAG
. : . : . : . : . : . :
JMSF046C13+ GCCAAGAATCTCGACAGATTTGAGAGTGGGAGTCTTTGGCTCTAGCTTAAACCTGTTATC
JMSF036C23+ GCCAAGAATCTCGACAGATTTGAGAGTGGGAGTCTTTGGCTCTAGCTTAAACCTGTTATC
JMSF045N11+ GCCAAGAATCTCGACAGATTTGAGAGTGGGAGTCTTTGGCTCTAGCTTAAACCTGTTATC
JMFF015N11+ C
JMFF045H22+ GCCAAGAATCTCGACAGATTGAGNAGTGGGAGTCTNTGGCTCTAGCTTAAACCTGTTATC
____________________________________________________________
consensus GCCAAGAATCTCGACAGATTTGAGAGTGGGAGTCTTTGGCTCTAGCTTAAACCTGTTATC
. : . : . : . : . : . :
JMSF046C13+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
JMSF036C23+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
JMSF045N11+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
JMFF019M08+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
JMFF015N11+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
JMFF045H22+ TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
____________________________________________________________
consensus TTCAAAAGTCCCCGACACAATTCCGGTTGCCATTGCAGAGGCAGCACTGAGCTTCGATTC
. : . : . : . : . : . :
JMSF046C13+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
JMSF036C23+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
JMSF045N11+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
JMSF005L09+ GAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
JMFF019M08+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
JMFF015N11+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACACTTACTTGCCTGAGCAGATT
JMFF045H22+ CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
____________________________________________________________
consensus CACCGAGAGGCCTTCAGCCGAAGCAAGTGCAACAGCAACAC-TACTTGCCTGAGCAGATT
. : . : . : . : . : . :
JMSF046C13+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMSF036C23+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMSF045N11+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMSF005L09+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMFF019M08+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMFF015N11+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
JMFF045H22+ TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
____________________________________________________________
consensus TAGCAGCTGCAGCAATAGTCTCACCGAGAGTACGATAAGCAATGGTTGAAGAAACTACTG
. : . : . : . : . : . :
JMSF046C13+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMSF036C23+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMSF045N11+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMSF005L09+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMFF019M08+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMFF015N11+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
JMFF045H22+ ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
____________________________________________________________
consensus ACCCGAGCCCAACTAACCCAATCCTTTTAAACCCAAGAGCAGGCAGTCTTAGGACAATGG
. : . : . : . : . : . :
JMSF046C13+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMSF036C23+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMSF045N11+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMSF005L09+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMSF007M22+ CCCAGAAAAATCTTCNTCAGATGAGGCNTCAGACAGCAAACCACCCA
JMFF019M08+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMFF015N11+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
JMFF045H22+ ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
____________________________________________________________
consensus ATTGACCAGATTTCCCAGAAAAATCTTCCTCAGATGAGGCCTCAGACAGCAAACCACCCA
. : . : . : . : . : . :
JMSF046C13+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMSF036C23+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMSF045N11+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMSF005L09+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMSF007M22+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMSF010O13+ TTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMFF019M08+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMFF015N11+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
JMFF045H22+ ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
____________________________________________________________
consensus ATTTTGAGTCCAATTTTTGCAAGATCAAATTTTGGAACTTGGAATTTGGGTCTCTAGCCA
. : . : . : . : . : . :
JMSF046C13+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMSF036C23+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMSF045N11+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMSF005L09+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMSF007M22+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMSF010O13+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMFF019M08+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMFF015N11+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
JMFF045H22+ TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
____________________________________________________________
consensus TGTCCTTCTCTGTCACACCTACTGCAAGTATGTCTCCTTTCCATTCCAGCAAATCGACCT
. : . : . : . : . : . :
JMSF046C13+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMSF036C23+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMSF045N11+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMSF005L09+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMSF007M22+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMSF010O13+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMFF019M08+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMFF015N11+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
JMFF045H22+ CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
____________________________________________________________
consensus CTCTTGCAGCAATCAATATCTTGGGACGTTGGATTTGATTGGGTTTAGTGAGGCCAAGAG
. : . : . : . : . : . :
JMSF046C13+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCT
JMSF036C23+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCT
JMSF045N11+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCTGCC
JMSF005L09+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGC
JMSF007M22+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGC
JMSF010O13+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCT
JMFF019M08+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCTGCC
JMFF015N11+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCTGCC
JMFF045H22+ TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCTGCCCG
____________________________________________________________
consensus TTGCTAGAGCTACGGAGTGAGCCATATATGAGCCAAAGCTGAGGATCTGAGAGCTGCCCG