Contig 000251:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF045K08-                                                             CCTTATGGC
rJMFF045C10-                                                             CCTTATGGC
                      ____________________________________________________________
consensus                                                                CCTTATGGC
 
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rJMFF045K08-          GGATCACCCTGGAGTGTTTTTTTTTTTTTTTTGCACTATAAATACTGTCTCTATCATCCT
rJMFF045C10-          GGATCACCCTGGAGTGTTTTTTTTTTTTTTTTGCACTATAAATACTGTCTCTATCATCCT
                      ____________________________________________________________
consensus             GGATCACCCTGGAGTGTTTTTTTTTTTTTTTTGCACTATAAATACTGTCTCTATCATCCT
 
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rJMFF045K08-          CAAACTTACTGCAATCAACGAAGCAAACAAGAGCAAACACAACATTTGGCTTTCCTTCAA
rJMFF045C10-          CAAACTTACTGCAATCAACGAAGCAAACAAGAGCAAACACAACATTTGGCTTTCCTTCAA
                      ____________________________________________________________
consensus             CAAACTTACTGCAATCAACGAAGCAAACAAGAGCAAACACAACATTTGGCTTTCCTTCAA
 
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rJMFF045K08-          CAAGGTAACCTCTACTCTTTCCTTTATTCTTCCCTATGCATTTTATTTACAGGAGTAGGA
rJMFF045C10-          CAAGGTAACCTCTACTCTTTCCTTTATTCTTCCCTATGCATTTTATTTACAGGAGTAGGA
                      ____________________________________________________________
consensus             CAAGGTAACCTCTACTCTTTCCTTTATTCTTCCCTATGCATTTTATTTACAGGAGTAGGA
 
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rJMFF045K08-          AGAGGAAGAACGGATACGATACAGCTGCAGCGTGAAGGAAAGAAGAGACCGATCACCTGT
rJMFF045C10-          AGAGGAAGAACGGATACGATACAGCTGCAGCGTGAAGGAAAGAAGAGACCGATCACCTGT
                      ____________________________________________________________
consensus             AGAGGAAGAACGGATACGATACAGCTGCAGCGTGAAGGAAAGAAGAGACCGATCACCTGT
 
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rJMFF045K08-          CATTTAATTTTCTGCCGACTGTTGCCGGAAATCGCCGCTGTTGAGTGTAGTCGGAGTTTC
rJMFF045C10-          CATTTAATTTTCTGCCGACTGTTGCCGGAAATCGCCGCTGTTGAGTGTAGTCGGAGTTTC
                      ____________________________________________________________
consensus             CATTTAATTTTCTGCCGACTGTTGCCGGAAATCGCCGCTGTTGAGTGTAGTCGGAGTTTC
 
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rJMFF045K08-          TTGXXXXXXXXXXXXXXXXXXAGNTAAAGGCGCCGGAGACCGCCACTGCACTGCCGAGAC
rJMFF045C10-          TTGXXXXXXXXXXXXXXXXXXAGTTAAAGGCGCCGGAGACCGCCACTGCACTGCCGAGAC
JMFF045K08+                                   TAAAGGCGCCGGAGACCGCCACTGCACTGCCGAGAC
JMFN030G19+                                                        CTGCACTGCCGAGAC
JMFF045C10+                                   TAAAGGCGCCGGAGACCGCCACTGCACTGCCGAGAC
                      ____________________________________________________________
consensus             TTGNNNNNNNNNNNNNNNNNNAGTTAAAGGCGCCGGAGACCGCCACTGCACTGCCGAGAC
 
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rJMFF045K08-          GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
rJMFF045C10-          GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
JMFF045K08+           GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
JMFN030G19+           GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
JMFF045C10+           GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
                      ____________________________________________________________
consensus             GGCCGGAGGTAGATGGGATCACCAGGTTGTTGAGTCGCTGCCCAGCTCTATCCTTCAGAA
 
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rJMFF045K08-          GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
rJMFF045C10-          GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
JMFF045K08+           GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
JMFN030G19+           GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
JMFF045C10+           GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
                      ____________________________________________________________
consensus             GTTGATGCCCTCTGTTCATCTCTGCTTCTTGACCGCTTGGAGTTCGATGCTGCTAGACTA
 
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rJMFF045K08-          CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
rJMFF045C10-          CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
JMFF045K08+           CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
JMFN030G19+           CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
JMFF045C10+           CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
                      ____________________________________________________________
consensus             CTGCTCGCAGGAGCTTCGCAGGAGTCGCCGGAATTCGTTCTTCGTCGAAGTCGCCGGAAG
 
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rJMFF045K08-          TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCC                    
rJMFF045C10-          TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCCG                   
JMFF045K08+           TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCCGGAGATCCATCGCTGTCTTC
JMFN030G19+           TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCCGGAGATCCATCGCTGTCTTC
JMFF045C10+           TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCCGGAGATCCATCGCTGTCTTC
                      ____________________________________________________________
consensus             TTCGTAGCAAAAGTCGTCAGAATTTACTGCTAAAATTTCCGGAGATCCATCGCTGTCTTC
 
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JMFF045K08+           GCCGGAGTTCTTCGTCGAAGTCACCGCAGAGACGTGGTCCGCCTTCGAACTGCCGCCGTC
JMFN030G19+           GCCGGAGTTCTTCGTCGAAGTCACCGCAGAGACGTGGTCCGCCTTCGAACTGCCGCCGTC
JMFF045C10+           GCCGGAGTTCTTCGTCGAAGTCACCGCAGAGACGTGGTCCGCCTTCGAACTGCCGCCGTC
                      ____________________________________________________________
consensus             GCCGGAGTTCTTCGTCGAAGTCACCGCAGAGACGTGGTCCGCCTTCGAACTGCCGCCGTC
 
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JMFF045K08+           GAAAGAGAATGGAACAACCACCAGGGCGCGGAGCTATTTTTCCTTTTGCAGAAGTCGCAG
JMFN030G19+           GAACGAGAATGGAACAACCACCAGGGCGCGGAGCTATTTTTCCTTTTGCAGAAGTCGCAG
JMFF045C10+           GAAAGAGAATGGAACAACCACCAGGGCGCGGAGCTATTTTTCCTTTTGCAGAAGTCGCAG
                      ____________________________________________________________
consensus             GAAAGAGAATGGAACAACCACCAGGGCGCGGAGCTATTTTTCCTTTTGCAGAAGTCGCAG
 
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JMFF045K08+           GTCGCCGGAATTTTCTGAAGGTTGCTGGAGTTCTGTTCGTCTTGCCGATTGTTGGAGTTC
JMFN030G19+           GTCGCCGGAATTTTCTGAAGGTTGCTGGAGTTCTGTTCGTCTTGCCGATTGTTGGAGTTC
JMFF045C10+           GTCGCCGGAATTTTCTGAAGGTTGCTGGAGTTCTGTTCGTCTTGCCGATTGTTGGAGTTC
                      ____________________________________________________________
consensus             GTCGCCGGAATTTTCTGAAGGTTGCTGGAGTTCTGTTCGTCTTGCCGATTGTTGGAGTTC
 
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JMFF045K08+           ATCGACGGGACTTTTGTTTTTTTTTTTTTTGCAGAAGCCGCCGGTAACTAGAGCTTTCTA
JMFN030G19+           ATCGACGGGACTTTTGTTTTTTTTTTTTTCGCAGAAGCCGCCGGTAACTAGAGCTTTCTA
JMFF045C10+           ATCGACGGGACTTTTGTTTTTTTTTTTTTTGCAGAAGCCGCCGGTAACTAGAGCTTTCTA
                      ____________________________________________________________
consensus             ATCGACGGGACTTTTGTTTTTTTTTTTTTTGCAGAAGCCGCCGGTAACTAGAGCTTTCTA
 
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JMFF045K08+           CAACATCACAAATTTGCGTAGTGTTTTAAGGGAGACTTCTGGGTTGTTGCTTCGCTGACG
JMFN030G19+           CAACATCACAAATTTGCGTAGTGTTTTAAGGGAGACTTCTGGGTTGTTGCTTCGCTGACG
JMFF045C10+           CAACATCACAAATTTGCGTAGTGTTTTAAGGGAGACTTCTGGGTTGTTGCTTCGCTGACG
                      ____________________________________________________________
consensus             CAACATCACAAATTTGCGTAGTGTTTTAAGGGAGACTTCTGGGTTGTTGCTTCGCTGACG
 
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JMFF045K08+           GAGACTTCTCAAAAAGGGTTGTTGCTTCGCTGATGATTAAAGGAGACTGGATGGGAGGAC
JMFN030G19+           GAGACTTCTC                                                  
JMFF045C10+           GAGACTTCTCAAAAAGGGTTGTTGCTTCGCTGATGATTAAAGGAGACTGGATGGGAGGAC
                      ____________________________________________________________
consensus             GAGACTTCTCAAAAAGGGTTGTTGCTTCGCTGATGATTAAAGGAGACTGGATGGGAGGAC