Contig 000247:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001L12Sequence553000247 (5)ref|XP_006361688.1|194PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]675002736 (5)ref|XP_009794794.1|2e-45PREDICTED: serine carboxypeptidase-like [Nicotiana sylvestris]
JMFF044D18Sequence652000247 (5)ref|XP_006361688.1|171PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]608002736 (5)ref|XP_004250045.1|2e-96PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
JMFF050N02Sequence639000247 (5)ref|XP_006361688.1|238PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]454002736 (5)ref|XP_004250045.1|3e-05PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
JMFS060C10Sequence614000247 (5)ref|XP_010243256.1|1e-68PREDICTED: serine carboxypeptidase-like [Nelumbo nucifera]
JMFS155E07Sequence624000247 (5)ref|XP_006361688.1|167PREDICTED: serine carboxypeptidase-like 49-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFF050N02+                                                                      T
                      ____________________________________________________________
consensus                                                                        T
 
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JMFF050N02+           CAGAGCTGTAACTGAAGCCAGTCCCAATAGGTTGGTCAACATACAAAAGATTAGAGACCT
                      ____________________________________________________________
consensus             CAGAGCTGTAACTGAAGCCAGTCCCAATAGGTTGGTCAACATACAAAAGATTAGAGACCT
 
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JMFF001L12+                                     AGTGACAGGTTATTTGCAATTTTGAAAGGTCCAT
JMFS060C10+             TCCCATCCATACTTATTCCATTCTAGTGACAGGTTATTTGCAATTTTGAAAGGTCCAT
JMFF050N02+           TATCCCATCCATACTTATTCCATTCTAGTGACAGGTTATTTGCAATTTGAAAGGTNCCAT
                      ____________________________________________________________
consensus             TATCCCATCCATACTTATTCCATTCTAGTGACAGGTTATTTGCAATTTTGAAAGGTCCAT
 
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JMFF001L12+           TCTCAAAGAAAAGTGCCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
JMFS060C10+           TCTCAAAGAAAAGTGCCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
JMFF050N02+           TCTCAAAGAAAAGTGCCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
JMFS155E07+                          CCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
JMFF044D18+                   AAAAGTGCCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
                      ____________________________________________________________
consensus             TCTCAAAGAAAAGTGCCAACTCACTACTGCAGCCTGGACCTCCCGTTAACCAGATAACAA
 
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JMFF001L12+           CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
JMFS060C10+           CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
JMFF050N02+           CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
JMFS155E07+           CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
JMFF044D18+           CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
                      ____________________________________________________________
consensus             CAGGGTCATCCTTTTTACCGCGGCGTGATTCAAAGAAAAAGTAGAACATCCTAGCAGCAT
 
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JMFF001L12+           AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
JMFS060C10+           AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
JMFF050N02+           AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
JMFS155E07+           AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
JMFF044D18+           AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
                      ____________________________________________________________
consensus             AAGAGTGTTGGATCTTAAAGTAGCCGGCATGGTGACCTAAATCCTCAACGGAGACGGTAG
 
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JMFF001L12+           GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
JMFS060C10+           GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
JMFF050N02+           GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
JMFS155E07+           GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
JMFF044D18+           GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
                      ____________________________________________________________
consensus             GATCGGCGAGGTTGGGGAACTTGAACAGCTTCTCCACGAGCTTGGGCCCCTGCTCGGCTG
 
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JMFF001L12+           CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
JMFS060C10+           CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
JMFF050N02+           CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
JMFS155E07+           CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
JMFF044D18+           CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
                      ____________________________________________________________
consensus             CAGAAAGCGAGCCCCGTGGGACGATGTTGACGGACTCCTTGGGGAACAAATTCAGCTCTC
 
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JMFF001L12+           TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
JMFS060C10+           TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
JMFF050N02+           TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
JMFS155E07+           TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
JMFF044D18+           TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
                      ____________________________________________________________
consensus             TGATCAGCTTCTCCGCCTGCGCGGACGCAAACCTCGAATTCGAAGGGAATAAATCCCCCA
 
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JMFF001L12+           AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATACAACGATCGACCTCT
JMFS060C10+           AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATAC              
JMFF050N02+           AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATACAACGATCGACCTCT
JMFS155E07+           AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATACAACGATCGACCTCT
JMFF044D18+           AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATACAACGATCGACCTCT
                      ____________________________________________________________
consensus             AACAAGATGAAGGCGAGAGAACGAATAGCAATACGAGAAGAGATACAACGATCGACCTCT
 
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JMFF001L12+           CCATTTCAGCAGATCGATTCACAGATCACAACCAGACAGAGAGTTAAAACAGCTGAAGAT
JMFF050N02+           CCATTTCAGCAGATCGATTCACAGATCACAACCAGACAGAGAGTTAAAACAGCTGAAGAT
JMFS155E07+           CCATTTCAGCAGATCGATTCACAGATCACAACCAGACAGAGAGTTAAAACAGCTGAAGAT
JMFF044D18+           CCATTTCAGCAGATCGATTCACAGATCACAACCAGACAGAGAGTTAAAACAGCTGAAGAT
                      ____________________________________________________________
consensus             CCATTTCAGCAGATCGATTCACAGATCACAACCAGACAGAGAGTTAAAACAGCTGAAGAT
 
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JMFF001L12+           CGATCACCGCACGGCTCTGCATATAGTTAATTGTACGC                      
JMFF050N02+           CGATCACCGCACGGCTCTGCATATAGTTAATTGTACGC                      
JMFS155E07+           CGATCACCGCACGGCTCTGCATATAGTTAATTGTACGCAGAGATGTATACTCTCACACGT
JMFF044D18+           CGATCACCGCACGGCTCTGCATATAGTTAATTGTACGCAGAGATGTATACTCTCACACGT
                      ____________________________________________________________
consensus             CGATCACCGCACGGCTCTGCATATAGTTAATTGTACGCAGAGATGTATACTCTCACACGT
 
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JMFS155E07+           ATGAACTTAAACAGAGAGATATTTTGCTTAGGAGAGATGGAGAGATGGGGACGAAAGTAG
JMFF044D18+           ATGAACTTAAACAGAGAGATATTTTGCTTAGGAGAGATGGAGAGATGGGGACGAAAGTAG
                      ____________________________________________________________
consensus             ATGAACTTAAACAGAGAGATATTTTGCTTAGGAGAGATGGAGAGATGGGGACGAAAGTAG
 
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JMFS155E07+           CGGAGAAGGAATGTGCAAGTGATGATGGTATGGATGAAA                     
JMFF044D18+           CGGAGAAGGAATGTGCAAGTGATGATGGTATGGATGAAAAGTGGACGTTTTGATTTCCGG
                      ____________________________________________________________
consensus             CGGAGAAGGAATGTGCAAGTGATGATGGTATGGATGAAAAGTGGACGTTTTGATTTCCGG