| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF043O23 | Sequence | 636 | 000244 (7) | ref|XP_002515245.1| | 1e-71 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | 299 | 005508 (3) | |||
| JMFS025B05 | Sequence | 627 | 000244 (7) | ref|XP_002515245.1| | 3e-73 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | |||||
| JMFS056G04 | Sequence | 627 | 000244 (7) | ref|XP_002515245.1| | 2e-77 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | |||||
| JMFS128A12 | Sequence | 421 | 000244 (7) | ref|XP_002515245.1| | 1e-35 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | |||||
| JMFS145B12 | Sequence | 642 | 000244 (7) | ref|XP_011079527.1| | 2e-75 | PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Sesamu | |||||
| JMSF005B03 | Sequence | 296 | 000244 (7) | ref|XP_002515245.1| | 5e-10 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | |||||
| JMSF029G16 | Sequence | 674 | 000244 (7) | ref|XP_002515245.1| | 2e-86 | ATP-dependent RNA helicase, putative [Ricinus communis] gb|EEF47229.1| ATP-depen | 769 | 005508 (3) | gb|KDP35299.1| | 1e-125 | hypothetical protein JCGZ_09458 [Jatropha curcas] |
This contig is upended
. : . : . : . : . : . :
JMSF029G16+ TCTCTTAAAAGCATACCATCAGTCAAGTACTTCAAA
____________________________________________________________
consensus TCTCTTAAAAGCATACCATCAGTCAAGTACTTCAAA
. : . : . : . : . : . :
JMFS056G04+ CTGTCCGAGCACTACTGCAGTCTTCAAAACGAATGCTATAACCCACTTCCTCTCCAATG
JMSF029G16+ ACTGTCCGAGCACTACTGCAGTCTTCAAAACGAATGCTATAACCCACTTCCTCTCCAATG
JMFS145B12+ CTGTCCGAGCACTACTGCAGTCTTCANAACGAATGCTATAACCCACTTCCTCTCCAATG
JMFS025B05+ GCAGTCTTCANAACGAATGCTATAACCCACTTCCTCTCCAATG
JMFF043O23+ AACGAATGCTATAACCCACTTCCTCTCCAATG
____________________________________________________________
consensus ACTGTCCGAGCACTACTGCAGTCTTCAAAACGAATGCTATAACCCACTTCCTCTCCAATG
. : . : . : . : . : . :
JMFS056G04+ GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
JMSF029G16+ GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
JMFS145B12+ GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
JMFS025B05+ GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
JMFF043O23+ GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
____________________________________________________________
consensus GTCACATCCATCTCTTCAGCAACTCGACGAGAAACAGACATTGCAGCAACCCTCCGAGGT
. : . : . : . : . : . :
JMFS056G04+ TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
JMSF029G16+ TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
JMFS145B12+ TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
JMFS025B05+ TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
JMFF043O23+ TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
____________________________________________________________
consensus TGAGTGCATCCAATCATATACTTCCTTCGCTTATCAGGGGTCTCAACATCAACAGCATCA
. : . : . : . : . : . :
JMFS056G04+ AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
JMSF029G16+ AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
JMFS145B12+ AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
JMFS025B05+ AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
JMFS128A12+ GACCAAGATGAGG
JMFF043O23+ AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
____________________________________________________________
consensus AGAACAAACTGAGGTATCTGAGTGGTTTTACCACTACCAGTTTCTCCGACCAAGATGAGG
. : . : . : . : . : . :
JMFS056G04+ GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
JMSF029G16+ GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
JMFS145B12+ GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
JMFS025B05+ GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
JMFS128A12+ GTTTGATTGGCTTTCAAGACCGGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
JMFF043O23+ GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
____________________________________________________________
consensus GTTTGATTGGCTTTCAAGACCTGCAGGAACTCCTCTTTCTGGTGCCAAACAGGAAGAGTC
. : . : . : . : . : . :
JMFS056G04+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
JMSF029G16+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
JMFS145B12+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
JMFS025B05+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
JMSF005B03+ CCTGCCGGTCCAGCTATTG
JMFS128A12+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
JMFF043O23+ TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
____________________________________________________________
consensus TTCCTCTTCTCCAAGATCTCATAGTACCTCTGGGAGTAGGGCCTGCCGGTCCAGCTATTG
. : . : . : . : . : . :
JMFS056G04+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
JMSF029G16+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
JMFS145B12+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGGTTG
JMFS025B05+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
JMSF005B03+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
JMFS128A12+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
JMFF043O23+ ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
____________________________________________________________
consensus ACGGAAGAGGACATGGCGGCGTTGTTGGGCTGAAGCGCGGCACCAACACCGTTGAGCTTG
. : . : . : . : . : . :
JMFS056G04+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
JMSF029G16+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
JMFS145B12+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
JMFS025B05+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
JMSF005B03+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGCCGAACAAACTCACCTTTCTCTTC
JMFS128A12+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
JMFF043O23+ GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
____________________________________________________________
consensus GAGATCTTGGTGGAGACGGCGGCGTCGTCCACAACGTCGAACAAACTCACCTTTCTCTTC
. : . : . : . : . : . :
JMFS056G04+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
JMSF029G16+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCCCCTTGTTGTCGACGACGC
JMFS145B12+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
JMFS025B05+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
JMSF005B03+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
JMFS128A12+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
JMFF043O23+ CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
____________________________________________________________
consensus CTCTCGGTTCCCATCAATCAAATCCGCAAGATGAGGAAACCTCCTTGTTGTCGACGACGC
. : . : . : . : . : . :
JMFS056G04+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMSF029G16+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMFS145B12+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMFS025B05+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMSF005B03+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMFS128A12+ AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
JMFF043O23+ AGAAGAATGGGACGATGCCTCCCGTNGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
____________________________________________________________
consensus AGAAGAATGGGACGATGCCTCCCGTTGCCGTCGTCTTGTTTTTGGGAAATTTGCTACGAG
. : . : . : . : . : . :
JMFS056G04+ CCGCAACGCAGAAGAGAACAGAGGCGA
JMSF029G16+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTT
JMFS145B12+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTTGTTGTTG
JMFS025B05+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTTGTTGTTG
JMSF005B03+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTT
JMFS128A12+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTTGTTGTTG
JMFF043O23+ CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTTGTTGTTGATTTGAGTCGAGTTTAT
____________________________________________________________
consensus CCGCAACGCAGAAGAGAACAGAGGCGATTGGAATTTGTTGTTGATTTGAGTCGAGTTTAT