Contig 000243:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023B20Sequence298000243 (2)dbj|BAJ34193.1|4e-54unnamed protein product [Thellungiella halophila]762004761 (3)emb|CBI20667.3|6e-126unnamed protein product [Vitis vinifera]
JMFF043O02Sequence629000243 (2)dbj|BAJ34193.1|5e-134unnamed protein product [Thellungiella halophila]580004761 (3)gb|KHN37049.1|4e-85Glycine dehydrogenase [decarboxylating], mitochondrial [Glycine soja]

Alignment

This contig is upended


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JMFF043O02+                                          CGTGTGTTGAAGGATATGTAACCATAAGA
                      ____________________________________________________________
consensus                                            CGTGTGTTGAAGGATATGTAACCATAAGA
 
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JMFF043O02+           GCAGCTAGATTATCTTTATTTGCCTCAGCAGCCTTCTTTAGTTCTTCAATATTAATGTTT
                      ____________________________________________________________
consensus             GCAGCTAGATTATCTTTATTTGCCTCAGCAGCCTTCTTTAGTTCTTCAATATTAATGTTT
 
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JMFF043O02+           CCTTTTGCATCAGTTCCAACAGCAACAATTTTCATTCCACACATGGCTGCACTTGCGGGA
                      ____________________________________________________________
consensus             CCTTTTGCATCAGTTCCAACAGCAACAATTTTCATTCCACACATGGCTGCACTTGCGGGA
 
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JMFF043O02+           TTTGTTCCATGTGCAGATACAGGTATGATGCATACATTGCGGTGACTGTCACCTCTCGAC
                      ____________________________________________________________
consensus             TTTGTTCCATGTGCAGATACAGGTATGATGCATACATTGCGGTGACTGTCACCTCTCGAC
 
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JMFF043O02+           AAATGATATGCACGAATGACCATCAATCCTGCATACTCTCCGGCAGCACCAGCATTAGGT
                      ____________________________________________________________
consensus             AAATGATATGCACGAATGACCATCAATCCTGCATACTCTCCGGCAGCACCAGCATTAGGT
 
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JMFF043O02+           TGCAAGGAAAAGGAATCAAATCCAGTAATTGTACACAATAGTTCACCCAAATCATTGAAC
                      ____________________________________________________________
consensus             TGCAAGGAAAAGGAATCAAATCCAGTAATTGTACACAATAGTTCACCCAAATCATTGAAC
 
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JMFF023B20+             TTCCTGGAATCCTGCAGCCTGTTCAGTGGGTGCAAACGGGTGAATATCTGCAAAGCTA
JMFF043O02+           ATTTCCTGGAATCCTGCAGCCTGTTCAGTGGGTGCAAACGGGTGAATATCTGCAAAGCTA
                      ____________________________________________________________
consensus             ATTTCCTGGAATCCTGCAGCCTGTTCAGTGGGTGCAAACGGGTGAATATCTGCAAAGCTA
 
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JMFF023B20+           GGCCATGTCACTGGCATCATCTCTGTAGTTGCATTCAGTTTCATAGTACAGGATCCAAGA
JMFF043O02+           GGCCATGTCACTGGCATCATCTCTGTAGTTGCATTCAGTTTCATAGTACAGGATCCAAGA
                      ____________________________________________________________
consensus             GGCCATGTCACTGGCATCATCTCTGTAGTTGCATTCAGTTTCATAGTACAGGATCCAAGA
 
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JMFF023B20+           GGAATCATGCTGTGGCACAGAGAAATATCCTTCGCTTGCAGCCTATGAAGGTACCTAAGC
JMFF043O02+           GGAATCATGCTGTGGCACAGAGAAATATCCTTCGCTTGCAGCCTATGAAGGTACCTAAGC
                      ____________________________________________________________
consensus             GGAATCATGCTGTGGCACAGAGAAATATCCTTCGCTTGCAGCCTATGAAGGTACCTAAGC
 
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JMFF023B20+           AACTCATGCTCAGTGTGGTACGTGTTGAATACTGGGTGAGTCAAATATGGACTATCCCTT
JMFF043O02+           AACTCATGCTCAGTGTGGTACGTGTTGAATACTGGGTGAGTCAAATATGGACTATCCCTT
                      ____________________________________________________________
consensus             AACTCATGCTCAGTGTGGTACGTGTTGAATACTGGGTGAGTCAAATATGGACTATCCCTT
 
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JMFF023B20+           ACAAGACTGGAAGGAATCACATTTTGAACCTCTGGTGCAATAGATTGAGCACTGAATGGC
JMFF043O02+           ACAAGACTGGAAGGAATCACATTTTGAACCTCTGGTGCAATAGATTGAGCACTGAATGGC
                      ____________________________________________________________
consensus             ACAAGACTGGAAGGAATCACATTTTGAACCTCTGGTGCAATAGATTGAGCACTGAATGGC