| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF024O12 | Sequence | 364 | 000242 (12) | ref|XP_009624891.1| | 2e-36 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | 773 | 000242 (12) | |||
| JMFF029C02 | Sequence | 560 | 000242 (12) | ref|XP_009624891.1| | 3e-41 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | 770 | 000242 (12) | |||
| JMFF037A09 | Sequence | 418 | 000242 (12) | ref|XP_009624891.1| | 5e-38 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | |||||
| JMFF041I01 | Sequence | 641 | 000242 (12) | ref|XP_009624891.1| | 7e-41 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | 562 | 000242 (12) | |||
| JMFF043M22 | Sequence | 418 | 000242 (12) | ref|XP_009624891.1| | 5e-38 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | 418 | 000242 (12) | ref|XP_009624891.1| | 5e-38 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic |
| JMFF045E13 | Sequence | 630 | 000242 (12) | ref|XP_009624891.1| | 8e-40 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | 619 | 000242 (12) | |||
| JMFN014N23 | Sequence | 626 | 000242 (12) | ref|XP_009624891.1| | 3e-41 | PREDICTED: methyl-CpG-binding domain-containing protein 11-like isoform X2 [Nic | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF041I01- AGGAAGTATGAAGGAG
____________________________________________________________
consensus AGGAAGTATGAAGGAG
. : . : . : . : . : . :
rJMFF041I01- TCGACATTGCTTATTACAGCAGAATGAGTAGTTGTGTGAACAACAACATCGACACCAACA
rJMFF024O12- CTTATTACAGCAGAATGAGTAGTTGTGTGAACAACAACATCGACACCAACA
rJMFF029C02- CTTATTACAGCAGAATGAGTAGTTGTGTGAACAACAACATCGACACCAACA
____________________________________________________________
consensus TCGACATTGCTTATTACAGCAGAATGAGTAGTTGTGTGAACAACAACATCGACACCAACA
. : . : . : . : . : . :
rJMFF041I01- TCAACATCAACATGCAACCTAACATAAGTCTGGGCTAAGAGGTGTTATAGTAAAGACACA
rJMFF045E13- GGGCTAAGAGGTGTTATAGTAAAGACACA
rJMFF024O12- TCAACATCAACATGCAACCTAACATAAGTCTGGGCTAAGAGGTGTTATAGTAAAGACACA
rJMFF029C02- TCAACATCAACATGCAACCTAACATAAGTCTGGGCTAAGAGGTGTTATAGTAAAGACACA
____________________________________________________________
consensus TCAACATCAACATGCAACCTAACATAAGTCTGGGCTAAGAGGTGTTATAGTAAAGACACA
. : . : . : . : . : . :
rJMFF041I01- GATGGAGTCTGCATGCTACAAATCCTTTCTACAATTTTACAACATATGGAATATGTCCCA
rJMFF045E13- GATGGAGTCTGCATGCTACAAATCCTTTCTACAATTTTACAACATATGGAATATGTCCCA
rJMFF024O12- GATGGAGTCTGCATGCTACAAATCCTTTCTACAATTTTACAACATATGGAATATGTCCCA
rJMFF029C02- GATGGAGTCTGCATGCTACAAATCCTTTCTACAATTTTACAACATATGGAATATGTCCCA
____________________________________________________________
consensus GATGGAGTCTGCATGCTACAAATCCTTTCTACAATTTTACAACATATGGAATATGTCCCA
. : . : . : . : . : . :
rJMFF041I01- TCAACAGTCAGAGTGTATCTATCATTAACAATTGTCAAAATAAGCCACAAGACTGATCTG
rJMFF045E13- TCAACAGTCAGAGTGTATCTATCATTAACAATTGTCAAAATAAGCCACAAGACTGATCTG
rJMFF024O12- TCAACAGTCAGAGTGTATCTATCATTAACAATTGTCAAAATAAGCCACAAGACTGATCTG
rJMFF029C02- TCAACAGTCAGAGTGTATCTATCATTAACAATTGTCAAAATAAGCCACAAGACTGATCTG
____________________________________________________________
consensus TCAACAGTCAGAGTGTATCTATCATTAACAATTGTCAAAATAAGCCACAAGACTGATCTG
. : . : . : . : . : . :
rJMFF041I01- AGGTGTTAAAACTGGATTAGATCGAGAAGCAACTCAATTATTAACTCCATCTCCATCTCG
rJMFF045E13- AGGTGTTAAAACTGGATTAGATCGAGAAGCAACTCAATTATTAACTCCATCTCCATCTCG
rJMFF024O12- AGGTGTTAAAACTGGATTAGATCGAGAAGCAACTCAATTATTAACTCCATCTCCATCTCG
rJMFF029C02- AGGTGTTAAAACTGGATTAGATCGAGAAGCAACTCAATTATTAACTCCATCTCCATCTCG
____________________________________________________________
consensus AGGTGTTAAAACTGGATTAGATCGAGAAGCAACTCAATTATTAACTCCATCTCCATCTCG
. : . : . : . : . : . :
rJMFF041I01- TGACTCAAGAGCTTGGCTCCTCGGGTTTCCCGCCATTCACTGTCACTTCCCCCTCTACTT
rJMFF045E13- TGACTCAAGAGCTTGGCTCCTCGGGTTTCCCGCCATTCACTGTCACTTCCCCCTCTACTT
rJMFF024O12- TGACTCAAGAGCTTGGCTCCTCGGGTTTCCCGCCATTCACTGTCACTTCCCCCTCTACTT
rJMFF029C02- TGACTCAAGAGCTTGGCTCCTCGGGTTTCCCGCCATTCACTGTCACTTCCCCCTCTACTT
____________________________________________________________
consensus TGACTCAAGAGCTTGGCTCCTCGGGTTTCCCGCCATTCACTGTCACTTCCCCCTCTACTT
. : . : . : . : . : . :
rJMFF041I01- TGTTCACCTCGTTGTTAACTGAATCTTTCTGCTCCTCCATTGTACAATCCTTGTGTTCAT
rJMFF045E13- TGTTCACCTCGTTGTTAACTGAATCTTTCTGCTCCTCCATTGTACAATCCTTGTGTTCAT
rJMFF024O12- TGTTCACCTCGTTGTTAACTGAATCTTTCTGCTCCTCCATTGTACAATCCTTGTGTTCAT
rJMFF029C02- TGTTCACCTCGTTGTTAACTGAATCTTTCTGCTCCTCCATTGTACAATCCTTGTGTTCAT
____________________________________________________________
consensus TGTTCACCTCGTTGTTAACTGAATCTTTCTGCTCCTCCATTGTACAATCCTTGTGTTCAT
. : . : . : . : . : . :
rJMFF041I01- GTTTCTCGACTCCTGCTTCGTTTGGCTTTGCATCACCAGTGCTACCCTCTTTGTCGTCCT
rJMFF045E13- GTTTCTCGACTCCTGCTTCGTTTGGCTTTGCATCACCAGTGCTACCCTCTTTGTCGTCCT
rJMFF024O12- GTTTCTCGACTCCTGCTTCGTTTGGCTTTGCATCACCAGTGCTACCCTCTTTGTCGTCCT
rJMFF029C02- GTTTCTCGACTCCTGCTTCGTTTGGCTTTGCATCACCAGTGCTACCCTCTTTGTCGTCCT
____________________________________________________________
consensus GTTTCTCGACTCCTGCTTCGTTTGGCTTTGCATCACCAGTGCTACCCTCTTTGTCGTCCT
. : . : . : . : . : . :
rJMFF041I01- GCTTCTCTGCTGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
rJMFF045E13- GCTTCTCTGCTGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
rJMFF024O12- GCTTCTCTGCTGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
rJMFF029C02- GCTTCTCTGCTGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
JMFN014N23+ TGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
JMFF045E13+ ATCATCTTCAGCATTCTTCTCNTCATCTTCAG
JMFF041I01+ TGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
____________________________________________________________
consensus GCTTCTCTGCTGTTGCCTGCTTACCTTTATCATCTTCAGCATTCTTCTCCTCATCTTCAG
. : . : . : . : . : . :
rJMFF041I01- CATTCT
rJMFF045E13- CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
rJMFF024O12- CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
rJMFF029C02- CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
JMFN014N23+ CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
JMFF045E13+ CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
JMFF029C02+ TGCATTTCCTGTTCAGAAGGAG
JMFF041I01+ CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
____________________________________________________________
consensus CATTCTCTACCATTTTGACATCTTCCCCAGCATTGGTCTGCATTTCCTGTTCAGAAGGAG
. : . : . : . : . : . :
rJMFF045E13- CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
rJMFF024O12- CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
rJMFF029C02- CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
JMFN014N23+ CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
JMFF045E13+ CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
JMFF029C02+ CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
JMFF041I01+ CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
____________________________________________________________
consensus CATCTTCTTCTGCTTTGCCATCATCAGCAATTCGGGTTTCATCTTCATTCTCCTTCGTGC
. : . : . : . : . : . :
rJMFF045E13- CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTG
rJMFF024O12- CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
rJMFF029C02- CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTCGGGGATCC
JMFN014N23+ CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
JMFF045E13+ CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
JMFF029C02+ CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
JMFF041I01+ CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
____________________________________________________________
consensus CATCGTTCTTGGATTCCTCAGTCTCATCTTCCTTCTCCTTGGCATCACTGTC-GGGATCC
. : . : . : . : . : . :
rJMFF024O12- ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTC
rJMFF029C02- ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGNTGACGATTTTCTGCCTCG
JMFN014N23+ ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
JMFF045E13+ ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
JMFF029C02+ ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
JMFF041I01+ ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
JMFF037A09+ CAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
rJMFF043M22- CAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
JMFF024O12+ TCGT
JMFF043M22+ CAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
____________________________________________________________
consensus ACAGCTGCAGAATCCTCGGGTTTTTCCTCTTTCTTTGGAGTTGACGATTTTCTGCCTCGT
. : . : . : . : . : . :
JMFN014N23+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
JMFF045E13+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
JMFF029C02+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
JMFF041I01+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
JMFF037A09+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
rJMFF043M22- TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
JMFF024O12+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCGNCTGATCCT
JMFF043M22+ TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
____________________________________________________________
consensus TTTTTAGGAGGCTCGCTTTCAGGAGGCGGTGGAGCAGTCTTCGCCTTCTCG-CTGATCCT
. : . : . : . : . : . :
JMFN014N23+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF045E13+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF029C02+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF041I01+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF037A09+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
rJMFF043M22- TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF024O12+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
JMFF043M22+ TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
____________________________________________________________
consensus TGCTGATCTCCTAGGGGTTTCACCAGTTCCCCAGTCAAACTCGGATATCGGAGGACCACC
. : . : . : . : . : . :
JMFN014N23+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
JMFF045E13+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTATTCCCCAGTTGG
JMFF029C02+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
JMFF041I01+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
JMFF037A09+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
rJMFF043M22- AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
JMFF024O12+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
JMFF043M22+ AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
____________________________________________________________
consensus AGGGTTGGATTTCAGATACTGCTCCAACTGCTTTTTGCTAGTGAACTCTTCCCCAGTTGG
. : . : . : . : . : . :
JMFN014N23+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF045E13+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF029C02+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF041I01+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF037A09+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
rJMFF043M22- AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF024O12+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
JMFF043M22+ AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
____________________________________________________________
consensus AGAAGTAAATATGATCTCATTTTTCTTTGCTTTGGGGATAAACGTTTTTTTCCAGGCAGG
. : . : . : . : . : . :
JMFN014N23+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF045E13+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF029C02+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF041I01+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF037A09+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
rJMFF043M22- AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF024O12+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
JMFF043M22+ AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
____________________________________________________________
consensus AGGAGCAGGGAGCTCCAAGGACGCAACTTCATTCTTCTCCCCAGATGTGGCCATGCTTTC
. : . : . : . : . : . :
JMFN014N23+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTT
JMFF045E13+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
JMFF029C02+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
JMFF041I01+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
JMFF037A09+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
rJMFF043M22- CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
JMFF024O12+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
JMFF043M22+ CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT
____________________________________________________________
consensus CCACCTAACCCAAACTTGAGAAAGCTCTCAACGTTCTTGCTATCGCTATGCAAAGAAACT