Contig 000240:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF026N18+                                                   TTGGCCCCGACGGTGGCTGA
                      ____________________________________________________________
consensus                                                     TTGGCCCCGACGGTGGCTGA
 
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JMSF026N18+           TGTGAGAAGAAGGCTGATTGATTATAAGGAATATGTTGCATTCCCAAGCTGTAAGCATCA
                      ____________________________________________________________
consensus             TGTGAGAAGAAGGCTGATTGATTATAAGGAATATGTTGCATTCCCAAGCTGTAAGCATCA
 
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JMSF026N18+           GAAGGGGCTGCTATTTCGCCGGTAGCGATTCTGAGTCTCTCAACTTCGTTCTTTAGCGCT
                      ____________________________________________________________
consensus             GAAGGGGCTGCTATTTCGCCGGTAGCGATTCTGAGTCTCTCAACTTCGTTCTTTAGCGCT
 
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JMSF026N18+           TCATTCAAAGCATCACGCAATTGAGCTTGTTGTTCCATGGCTTGCAAACGAAGTTTAAGC
                      ____________________________________________________________
consensus             TCATTCAAAGCATCACGCAATTGAGCTTGTTGTTCCATGGCTTGCAAACGAAGTTTAAGC
 
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JMSF026N18+           TCAGTATTTTCGTTACTAAGCCCTGTCGTATCCCTCTGGAACAGGGTAAGCTGTGCGGAA
                      ____________________________________________________________
consensus             TCAGTATTTTCGTTACTAAGCCCTGTCGTATCCCTCTGGAACAGGGTAAGCTGTGCGGAA
 
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JMSF026N18+           AGTGTGGTTGCTTCTGTCTGAAGGGTCTGCACTTTTCTCTCGAGTTCTGATATGTAGCGC
                      ____________________________________________________________
consensus             AGTGTGGTTGCTTCTGTCTGAAGGGTCTGCACTTTTCTCTCGAGTTCTGATATGTAGCGC
 
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JMSF026N18+           GCCTTCCTCTCTTTCGATCGAGCAGCTGATTGGCGATTTGCCAGAATTCTTTTAGCTCGC
JMFF043G02+                                            CGATTCGCCAGAATTCTTTTTGCTCGC
                      ____________________________________________________________
consensus             GCCTTCCTCTCTTTCGATCGAGCAGCTGATTGGCGATTTGCCAGAATTCTTTTTGCTCGC
 
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JMSF026N18+           TTGGGATCAATGGTCCAAAGCTCCGCAAGTTTATCAGGCGCCATAGCTTTCTTAGCTTCA
JMFF043G02+           TTAGGGTCAATGGTCCAGAGCTCAGCCAGCTTCTCAGGAGCCAAAGCTTTCTTAGCTTCA
                      ____________________________________________________________
consensus             TTGGGGTCAATGGTCCAGAGCTCCGCCAGTTTCTCAGGCGCCATAGCTTTCTTAGCTTCA
 
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JMSF026N18+           ATCGTGCTCTCGCTAAGCAGCAAGCTGGAGCTATCCACCGAGTTGCTATAGCGGTGGCGC
JMFF043G02+           ATGGCGCTCTCGCTCAGCAGCAAACTGGAGCTATCCACCGAGTTGCTGTGCCGATGGCGC
                      ____________________________________________________________
consensus             ATGGTGCTCTCGCTCAGCAGCAAGCTGGAGCTATCCACCGAGTTGCTGTGGCGGTGGCGC
 
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JMSF026N18+           GGCCGGC                                                     
JMFF043G02+           GGCCGTTCCGATGCCATCCCTCCGGCGCCGTCGTCATTGTCCAGTCCGGCAGCCGCGGCA
                      ____________________________________________________________
consensus             GGCCGTTCCGATGCCATCCCTCCGGCGCCGTCGTCATTGTCCAGTCCGGCAGCCGCGGCA
 
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JMFF043G02+           ATGGATCCGGCGCCGAGCTTCTCGATGTCCATGAAAGTGGAGAACAGATCGTCCTCGGAG
                      ____________________________________________________________
consensus             ATGGATCCGGCGCCGAGCTTCTCGATGTCCATGAAAGTGGAGAACAGATCGTCCTCGGAG
 
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JMFF043G02+           CCGATCTCTTCGAAGCTGCCGGCCGGCGCCGCATCGAAGGGGTCGGACGCCAGATCCAGA
                      ____________________________________________________________
consensus             CCGATCTCTTCGAAGCTGCCGGCCGGCGCCGCATCGAAGGGGTCGGACGCCAGATCCAGA
 
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JMFF043G02+           TCCTCCGGCAGACGGAAATTCACCTCCGAGTGGGCTCTCCGGTGGTGCGACGGCCACAAT
                      ____________________________________________________________
consensus             TCCTCCGGCAGACGGAAATTCACCTCCGAGTGGGCTCTCCGGTGGTGCGACGGCCACAAT
 
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JMFF043G02+           GCAGAGGAAAATTGCGGCGTCTGGTTCATTGTCGGCTTTGGATTTGACGGATCTTGCATT
                      ____________________________________________________________
consensus             GCAGAGGAAAATTGCGGCGTCTGGTTCATTGTCGGCTTTGGATTTGACGGATCTTGCATT
 
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JMFF043G02+           GTGACGTTAGCAAAGTAGTAAGGTGACGCCTTTTCTTCTGAGATTCAGAAAGTAAAAAGA
                      ____________________________________________________________
consensus             GTGACGTTAGCAAAGTAGTAAGGTGACGCCTTTTCTTCTGAGATTCAGAAAGTAAAAAGA
 
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JMFF043G02+           CGATGAAGCAGCAGCAGCTTTCAACTTGGAGTCCAAGATGAACAGACGCAGTTATCTACC
                      ____________________________________________________________
consensus             CGATGAAGCAGCAGCAGCTTTCAACTTGGAGTCCAAGATGAACAGACGCAGTTATCTACC