Contig 000238:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN033J01+                                      ACAATTAAAATTAACCCAAAACTACAAGGACTA
                      ____________________________________________________________
consensus                                        ACAATTAAAATTAACCCAAAACTACAAGGACTA
 
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JMFN033J01+           AAATGCAAAATCTAAGGAGAATGATTAGCACTACAGTCACTGAAGTTATTTCTTATTTCA
                      ____________________________________________________________
consensus             AAATGCAAAATCTAAGGAGAATGATTAGCACTACAGTCACTGAAGTTATTTCTTATTTCA
 
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JMFN033J01+           ATCAAGCCCCAACGGGGGCTGCCACGGCCGGGTTCACCTTCGGCGGCCTGCCTCGCCCTC
JMFN034O19+                          GGGCTGCCACGGCCGGGTTCACCTTCGGCGGCCTGCCTCGCCCTC
JMFF042O08+                          GGGCTGCCACGGCCGGGTTCACCTTCGGCGGCCTGCCTCGCCCTC
                      ____________________________________________________________
consensus             ATCAAGCCCCAACGGGGGCTGCCACGGCCGGGTTCACCTTCGGCGGCCTGCCTCGCCCTC
 
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JMFN033J01+           TCGGAGGTCCGCTGGCTGGAGGGGGAGCGGCGGCGGGAGTGGAGGACTTCGGGGGCCTTC
JMFN034O19+           TCGGAGGTCCGCTGGCTGGAGGGGGAGCGGCGGCGGGAGTGGAGGACTTCGGGGGCCTTC
JMFF042O08+           TCGGAGGTCCGCTGGCTGGAGGGGGAGCGGCGGCGGGAGTGGAGGACTTCGGGGGCCTTC
                      ____________________________________________________________
consensus             TCGGAGGTCCGCTGGCTGGAGGGGGAGCGGCGGCGGGAGTGGAGGACTTCGGGGGCCTTC
 
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JMFN033J01+           CACGTTTCCGGCCAGAGCCGCCGCCGGCGGAAGCTTTCTTCATGGGCGAAACCACCGGAG
JMFN034O19+           CACGTTTCCGGCCAGAGCCGCCGCCGGCGGAAGCTTTCTTCATGGGCGAAACCACCGGAG
JMFF042O08+           CACGTTTCCGGCCAGAGCCGCCGCCGGCGGAAGCTTTCTTCATGGGCGAAACCACCGGAG
                      ____________________________________________________________
consensus             CACGTTTCCGGCCAGAGCCGCCGCCGGCGGAAGCTTTCTTCATGGGCGAAACCACCGGAG
 
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JMFN033J01+           CGAACGGGTCACGCGGCTTGGGCGGCCTGCCACGAGGACGCGGCGGCGGGGGGACGTACC
JMFN034O19+           CGAACGGGTCACGCGGCTTGGGCGGCCTGCCACGAGGACGCGGCGGCGGGGGGACGTACC
JMFF042O08+           CGAACGGGTCACGCGGCTTGGGCGGCCTGCCACGAGGACGCGGTGGCGGGGGGACGTACC
                      ____________________________________________________________
consensus             CGAACGGGTCACGCGGCTTGGGCGGCCTGCCACGAGGACGCGGCGGCGGGGGGACGTACC
 
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JMFN033J01+           CCGGCGGTAGAGGCGCTTTCGGCTTCGGCGGACGGCCGCGGCCCCGGCGCGGCGGCGCAT
JMFN034O19+           CCGGCGGTAGAGGCGCTTTCGGCTTCGGCGGACGGCCGCGGCCCCGGCGCGGCGGCGCAT
JMFF042O08+           CCGGCGGTAGAGGCGCTTTCGGCTTCGGCGGACGGCCGCGGCCCCGGCGCGGCGGCGCAT
                      ____________________________________________________________
consensus             CCGGCGGTAGAGGCGCTTTCGGCTTCGGCGGACGGCCGCGGCCCCGGCGCGGCGGCGCAT
 
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JMFN033J01+           TTGGGTCCGGCTTCATGTAGTTGTTCTTCACCAACACCAGCTGCCCGGATTGCTTCATCT
JMFN034O19+           TTGGGTCCGGCTTCATGTAGTTGTTCTTCACCAACACCAGCTGCCCGGATTGCTTCATCT
JMFF042O08+           TTGGGTCCGGCTTCATGTAGTTGTTCTTCACCAACACCAGCTGCCCGGATTGCTTCATCT
                      ____________________________________________________________
consensus             TTGGGTCCGGCTTCATGTAGTTGTTCTTCACCAACACCAGCTGCCCGGATTGCTTCATCT
 
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JMFN033J01+           TGTCGAGGTAGTGCGTCAGCAGTGTGGCGTGAGATCCCGGCAGCTCTCCGCCGTGCGCCG
JMFN034O19+           TGTCGAGGTAGTGCGTCAGCAGTGTGGCGTGAGATCCCGGCAGCTCTCCGCCGTGCGCCG
JMFF042O08+           TGTCGAGGTAGTGCGTCAGCAGTGTGGCGTGAGATCCCGGCAGCTCTCCGCCGTGCGCCG
                      ____________________________________________________________
consensus             TGTCGAGGTAGTGCGTCAGCAGTGTGGCGTGAGATCCCGGCAGCTCTCCGCCGTGCGCCG
 
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JMFN033J01+           CCTCTATCTGCCTCGAAATGTCCGATTTTGTGGACCCACCCTTCTCGTTCAACTCCTCAA
JMFN034O19+           CCTCTATCTGCCTCGAAATGTCCGATTTTGTGGACCCACCCTTCTCGTTCAACTCCTCAA
JMFN032H07+                                                     TCTCGTTCAACTCCTCAA
JMFF042O08+           CCTCTATCTGCCTCGAAATGTCCGATTTTGTGGACCCACCCTTCTCGTTCAACTCCTCAA
                      ____________________________________________________________
consensus             CCTCTATCTGCCTCGAAATGTCCGATTTTGTGGACCCACCCTTCTCGTTCAACTCCTCAA
 
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JMFN033J01+           TCGCCGCCATTATCAG                                            
JMFN034O19+           TCGCCGCCATTATCAGCTCAGGGTATTGTGGGAGAGAGGAGTTAGCCGGCTGGTCTTCGA
JMFN032H07+           TCGCCGCCATTATCAGCTCAGGGTATTGTGGGAGAGAGGAGTTAGCCGGCTGGTCTTCGA
JMFF042O08+           TCGCCGCCATTATCAGCTCAGGGTATTGTGGGAGAGAGGAGTTAGCCGGCTGGTCTTCGA
                      ____________________________________________________________
consensus             TCGCCGCCATTATCAGCTCAGGGTATTGTGGGAGAGAGGAGTTAGCCGGCTGGTCTTCGA
 
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JMFN034O19+           CAGTAGCCATGATGTTACAACCTTAGAGAAAGAAACCGCGGTCAACGGTCAACGCAAGTT
JMFN032H07+           CAGTGGCCATGATGTTACAACCTTAGAGAAAGAAACCGCGGTCAACGGTCAACGCAAGTT
JMFF042O08+           CAGTGGCCATGATGTTACAACCTTAGAGAAAGAAACCGCGGTCAACGGTCAACGCAAGTT
                      ____________________________________________________________
consensus             CAGTGGCCATGATGTTACAACCTTAGAGAAAGAAACCGCGGTCAACGGTCAACGCAAGTT
 
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JMFN034O19+           CTAGAGAGAGAAAAATAACGAATTTTTAGAGGATAGGG                      
JMFN032H07+           CTAGAGAGAGAAAAATAACGAATTTTTAGAGGATAGGG                      
JMFF042O08+           CTAGAGAGAGAAAAATAACGAATTTTTAGAGGATAGGGAGAAGGAGAAGAATTGGGGATC
                      ____________________________________________________________
consensus             CTAGAGAGAGAAAAATAACGAATTTTTAGAGGATAGGGAGAAGGAGAAGAATTGGGGATC