Contig 000236:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035L05Sequence507000236 (4)ref|XP_009781717.1|7e-71PREDICTED: alcohol-forming fatty acyl-CoA reductase-like [Nicotiana sylvestris]702008275 (2)ref|XP_004241314.1|2e-106PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]
JMFF042I07Sequence659000236 (4)emb|CDP06945.1|3e-92unnamed protein product [Coffea canephora]591013875 (2)ref|XP_004241314.1|4e-69PREDICTED: fatty acyl-CoA reductase 3 [Solanum lycopersicum]
JMSF002A06Sequence264000236 (4)gb|EYU36077.1|3e-32hypothetical protein MIMGU_mgv1a018441mg, partial [Erythranthe guttata]741013875 (2)ref|XP_009631061.1|5e-93PREDICTED: fatty acyl-CoA reductase 3-like isoform X2 [Nicotiana tomentosiformi
JMSF031H17Sequence643000236 (4)ref|XP_009781717.1|6e-94PREDICTED: alcohol-forming fatty acyl-CoA reductase-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF031H17+                               TTATCTCATTCTCCCTATCAATGTCCAGCCCACATCTTCC
                      ____________________________________________________________
consensus                                 TTATCTCATTCTCCCTATCAATGTCCAGCCCACATCTTCC
 
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JMSF031H17+           ATTCAGTGTTTCACCCATTTGGAATGGTGTCTCCTGTAACAGCCCATCCCTTTCACCAGA
JMFF042I07+            TTCAGTGTTTCACCCATTTGGTATGGAGTCTCCTGTATCAACCCCTCCTTTTCACCAGA
                      ____________________________________________________________
consensus             ATTCAGTGTTTCACCCATTTGGTATGGTGTCTCCTGTATCAGCCCCTCCTTTTCACCAGA
 
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JMSF031H17+           CACGTAAGCAGTGGATACGTGAAGAAAAACCTTTAATTTCCGGCATTTTTTGGCGAAGTC
JMFF042I07+           CACGTAGGCAGTGGATACGTGGAGAAGAATCCTTAAATTTTGACATTTCTTGGCGAAGTC
                      ____________________________________________________________
consensus             CACGTAGGCAGTGGATACGTGGAGAAGAATCTTTAATTTTTGGCATTTTTTGGCGAAGTC
 
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JMSF031H17+           TAGTAAGTGTGTTGGTCCCATTGTATTAATCCCAATGGCCACATCATATCTTTCATAAAA
JMFF042I07+           TAGTATGTGTTTAGGTCCCATTGTATTAATCCCCATGGCAACATCGTATCTTTCATCAAA
                      ____________________________________________________________
consensus             TAGTATGTGTTTTGGTCCCATTGTATTAATCCCCATGGCCACATCGTATCTTTCATCAAA
 
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JMSF031H17+           ATCAGTAGTTGCAGCTAGGTTAACCATAATGTCTACTTCCCTCTGCATTTGGTCCAGCAG
JMFF042I07+           ACTGGTAGTTGCAGCTAGGTTAACCACAACATCTACTTCCCTCCACATTTGGTCCAGCAA
                      ____________________________________________________________
consensus             ATTGGTAGTTGCAGCTAGGTTAACCATAATGTCTACTTCCCTCTGCATTTGGTCCAGCAG
 
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JMSF031H17+           ATGAGAGTCCTTTACGCCCATCTTCTCACAACTAACATCACCGGCTACAACACTCACCTT
JMFF042I07+           ATTGGTGTCCTTTATGCCCAAATTTTGGTACGTAATGTCACCGCCCACAACAATTATTTT
                      ____________________________________________________________
consensus             ATTGGTGTCCTTTATGCCCATCTTTTGGTACGTAATGTCACCGGCTACAACACTTATTTT
 
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JMSF031H17+           TTCCGATATTATATTATTCAAC---TTTTCCCCATACTTCTCCTTCACAACTTTGAACAA
JMSF002A06+                                                      TTCACAACTTTAAACAA
JMFF035L05+                                                      TTCACAACTTTGAACAA
JMFF042I07+           TGACGAAATTAGGGAATTCAGCTCTTCTTCTCCATACTTGTGTTTCACAACTTTAAACAA
                      ____________________________________________________________
consensus             TTCCGATATTATGTTATTCAGCTCTTTTTCTCCATACTTGTGTTTCACAACTTTGAACAA
 
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JMSF031H17+           GTCTTTTGCCATAACCTCGGAGTTAAAACGCTGCACGGCGGCCATTGTATCTGCAGCTCT
JMSF002A06+           GTCTTTTGCCATTACCTCGGAGTTGAAACGCTGTACGGCGGCGGCGGTATCTGCAGCTCT
JMFF035L05+           GTCTTTTGCCATAACCTCGGAGTTAAAACGCTGCACGGCGGCCATTGTATCTGCAGCTCT
JMFF042I07+           GTCTTTTGCCATTACCTCGGAGTTGAAACGCTGTACGGCGGCGGCGGTATCTGCAGCTCT
                      ____________________________________________________________
consensus             GTCTTTTGCCATTACCTCGGAGTTGAAACGCTGTACGGCGGCGGTTGTATCTGCAGCTCT
 
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JMSF031H17+           CAGGAGAAGATACAGCTTCTTCACATTTGGCTGAACTCTCAGTATTTTCTCCACAAAAAT
JMSF002A06+           AAGGAGAAGATACAGTTTCTTCACATTTGGCTGAACTCTCAGTATTTTCTCCACAAAAAT
JMFF035L05+           CAGGAGAAGATACAGCTTCTTCACATTTGGCTGAACTCTCAGTATTTTCTCCACAAAAAT
JMFF042I07+           AAGGAGAAGATACAGTTTCTTCACATTTGGCTGAACTCTCAGTATTTTCTCCACAAAAAT
                      ____________________________________________________________
consensus             CAGGAGAAGATACAGTTTCTTCACATTTGGCTGAACTCTCAGTATTTTCTCCACAAAAAT
 
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JMSF031H17+           TTTAGCGAGAAAGCCAGTGGCACCAGTGACAAGAATGGCTCTGTTCTCAAAAAACTCCAC
JMSF002A06+           TTTTGCTAAGAAGCCAGTGGCGCCGGTGACAAGAATGGCTCTGTTGTCCAGAAAGTGAAG
JMFF035L05+           TTTAGCGAGAAAGCCAGTGGCACCAGTGACAAGAATGGCTCTGTTCTCCAAAAACTCCAC
JMFF042I07+           TTTTGCTAAGAAGCCAGTGGCGCCGGTGAGAAGAATGGCTCTGTTGTCCAGAAAGTGAAG
                      ____________________________________________________________
consensus             TTTTGCTAGGAAGCCAGTGGCGCCGGTGACAAGAATGGCTCTGTTGTCCAGAAAGTGCAG
 
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JMSF031H17+           AGCACTGCCCAACTCCATT                                         
JMSF002A06+           AGCACTGCCCAACTCCATT                                         
JMFF035L05+           AGCACTGCCCAACTCCATT                                         
JMFF042I07+           AGCACTGCCCAACTCCATTGTAGAAGTGGAAGGATCGGAGGAGAAAAGATGTGATGAGAG
                      ____________________________________________________________
consensus             AGCACTGCCCAACTCCATTGTAGAAGTGGAAGGATCGGAGGAGAAAAGATGTGATGAGAG
 
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JMFF042I07+           GAGAGAAAGGGAAGTATAAATAGCTGAAGATTTTGAAGCTGCGCTGATAGAGTAAATAAT
                      ____________________________________________________________
consensus             GAGAGAAAGGGAAGTATAAATAGCTGAAGATTTTGAAGCTGCGCTGATAGAGTAAATAAT