Contig 000233:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018J23Sequence512000233 (3)ref|XP_009590317.1|1e-41PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis]743002662 (4)emb|CBI32445.3|3e-94unnamed protein product [Vitis vinifera]
JMFF036N04Sequence575000233 (3)ref|XP_009590317.1|2e-57PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis]600002662 (4)emb|CBI32445.3|3e-76unnamed protein product [Vitis vinifera]
JMFF041J17Sequence659000233 (3)ref|XP_009590317.1|5e-75PREDICTED: serine carboxypeptidase-like 26 [Nicotiana tomentosiformis]647002662 (4)emb|CBI32445.3|3e-81unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMFF041J17+            ACTTATCATAATCCGAGGAAGTGTTGGAATAAGAGAAACCAACGCCGGCCGGTGACTCC
                      ____________________________________________________________
consensus              ACTTATCATAATCCGAGGAAGTGTTGGAATAAGAGAAACCAACGCCGGCCGGTGACTCC
 
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JMFF036N04+                                    TCCATGCAAATCTTCTTGAGTAAAGAGTTTTGGCG
JMFF041J17+           AGAAATAATGTATTTGCAACTCTATTCCATGCAAATCTTCTTGAGTAAAGAGTTTTGGCG
                      ____________________________________________________________
consensus             AGAAATAATGTATTTGCAACTCTATTCCATGCAAATCTTCTTGAGTAAAGAGTTTTGGCG
 
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JMFF036N04+           TCTGGGTTAACGCCGAAAGGTCCAATCTCTACAAAAGCACCCATTCCAAGTGATGAACAC
JMFF018J23+                                       CTACAAAAGCACCCATTCCAAGTGATGAACAC
JMFF041J17+           TCTGGGTTAACGCCGAAAGGTCCAATCTCTACAAAAGCACCCATTCCAAGTGATGAACAC
                      ____________________________________________________________
consensus             TCTGGGTTAACGCCGAAAGGTCCAATCTCTACAAAAGCACCCATTCCAAGTGATGAACAC
 
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JMFF036N04+           CCAGGACCTCCATTAAGCCATAGAATGAGAGGTTTAGTGGCAGAATTCTCAGCAGATTCA
JMFF018J23+           CCAGGACCTCCATTAAGCCATAGAATGAGAGGTTTAGTGGCAGAATTCTCAGCAGATTCA
JMFF041J17+           CCAGGACCTCCATTAAGCCATAGAATGAGAGGTTTAGTGGCAGAATTCTCAGCAGATTCA
                      ____________________________________________________________
consensus             CCAGGACCTCCATTAAGCCATAGAATGAGAGGTTTAGTGGCAGAATTCTCAGCAGATTCA
 
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JMFF036N04+           GCAAAGTAATAGAAAAGGCTTCTCCCATTCATCTTATCCACACCCACATACCCTGCGTAC
JMFF018J23+           GCAAAGTAATAGAAAAGGCTTCTCCCATTCATCTTATCCACACCCACATACCCTGCGTAC
JMFF041J17+           GCAAAGTAATAGAAAAGGCTTCTCCCATTCATCTTATCCACACCCACATACCCTGCGTAC
                      ____________________________________________________________
consensus             GCAAAGTAATAGAAAAGGCTTCTCCCATTCATCTTATCCACACCCACATACCCTGCGTAC
 
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JMFF036N04+           TGCTTGAACTTCACATTTGACGGCTGTCCCGGAAGCCCGCCGGCGATGAGATCATCCTCC
JMFF018J23+           TGCTTGAACTTCACATTTGACGGCTGTCCCGGAAGCCCGCCGGCGATGAGATCATCCTCC
JMFF041J17+           TGCTTGAACTTCACATTTGACGGCTGTCCCGGAAGCCCGCCGGCGATGAGATCATCCTCC
                      ____________________________________________________________
consensus             TGCTTGAACTTCACATTTGACGGCTGTCCCGGAAGCCCGCCGGCGATGAGATCATCCTCC
 
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JMFF036N04+           ATGCTTCCCACCTCGGAAAATGACGACACCATTTCTTCTTCAGTCACTGTGCTCGCTTCT
JMFF018J23+           ATGCTTCCCACCTCGGAAAATGACGACACCATTTCTTCTTCAGTCACTGTGCTCGCTTCT
JMFF041J17+           ATGCTTCCCACCTCGGAAAATGACGACACCATTTCTTCTTCAGTCACTGTGCTCGCTTCT
                      ____________________________________________________________
consensus             ATGCTTCCCACCTCGGAAAATGACGACACCATTTCTTCTTCAGTCACTGTGCTCGCTTCT
 
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JMFF036N04+           GCCCATGGCTCGCTATTGACGGAGATCGGCTGAGCGTGCATTTTAGCACGGCGTAAGGAC
JMFF018J23+           GCCCATGGCTCGCTATTGACGGAGATCGGCTGAGCGTGCATTTTAGCACGGCGTAAGGAC
JMFF041J17+           GCCCATGGCTCGCTATTGACGGAGATCGGCTGAGCGTGCATTTTAGCACGGCGTAAGGAC
                      ____________________________________________________________
consensus             GCCCATGGCTCGCTATTGACGGAGATCGGCTGAGCGTGCATTTTAGCACGGCGTAAGGAC
 
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JMFF036N04+           AGTAATCCCCGGCCTTGATCAATTTTGCTCAACCCATCCCCAAATCCCGAAAATGTTACC
JMFF018J23+           AGTAATCCCCGGCCTTGATCAATTTTGCTCAACCCATCCCCAAATCCCGAAAATGTTACC
JMFF041J17+           AGTAATCCCCGGCCTTGATCAATTTTGCTCAACCCATCCCCAAATCCCGAAAATGTTACC
                      ____________________________________________________________
consensus             AGTAATCCCCGGCCTTGATCAATTTTGCTCAACCCATCCCCAAATCCCGAAAATGTTACC
 
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JMFF036N04+           ATGATAATAAGAAGAGAAAACACATAATGAAATTTCGTGAATAATGAACCATGTTTCTTC
JMFF018J23+           ATGATAATAAGAAGAGAAAACACATAATGAAATTTCGTGAATAATGAACCATGTTTCTTC
JMFF041J17+           ATGATAATAAGAAGAGAAAACACATAATGAAATTTCGTGAATAATGAACCATGTTTCTTC
                      ____________________________________________________________
consensus             ATGATAATAAGAAGAGAAAACACATAATGAAATTTCGTGAATAATGAACCATGTTTCTTC
 
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JMFF036N04+           TCCATTGTTAGTTTGTTACTATACGTTGAAGAAGAAAACATACACCAAGGGAAGCGTCA 
JMFF018J23+           TCCATTGTTAGTTTGTTACTATACGTTGAAGAAGAAAACATACACCAAGGGAAGCGTCA 
JMFF041J17+           TCCATTGTTAGTTTGTTACTATACGTTGAAGAAGAAAACATACACCAAGGGAAGCGTCAC
                      ____________________________________________________________
consensus             TCCATTGTTAGTTTGTTACTATACGTTGAAGAAGAAAACATACACCAAGGGAAGCGTCAC