Contig 000232:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF021P14-                                                                  TATA
                      ____________________________________________________________
consensus                                                                     TATA
 
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rJMFF041C07-                                ATTAAAGACTTTTATTTGACCACATAGAAAATTAAAAA
rJMFF021P14-          TGCATGTATACACCATGCATATATTAAAGACTTTTATTTGACCACATAGAAAATTAAAAA
                      ____________________________________________________________
consensus             TGCATGTATACACCATGCATATATTAAAGACTTTTATTTGACCACATAGAAAATTAAAAA
 
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rJMFF041C07-          ACATACATCCGCATTAAGCATATATATGCTTATAATCTAAATAGAGTAGGAGATAAACGC
rJMFF021P14-          ACATACATCCGCATTAAGCATATATATGCTTATAATCTAAATAGAGTAGGAGATAAACGC
                      ____________________________________________________________
consensus             ACATACATCCGCATTAAGCATATATATGCTTATAATCTAAATAGAGTAGGAGATAAACGC
 
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rJMFF041C07-          GGTGTAACAAGTACTTCTAAAGGAGTTAACTTAGGCAAGATAATGCCTACGTCTTCCATC
rJMFF021P14-          GGTGTAACAAGTACTTCTAAAGGAGTTAACTTAGGCAAGATAATGCCTACGTCTTCCATC
                      ____________________________________________________________
consensus             GGTGTAACAAGTACTTCTAAAGGAGTTAACTTAGGCAAGATAATGCCTACGTCTTCCATC
 
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rJMFF041C07-          ATGTCCAATGGCTCATTTGGAACTGTGCTGAAATTAAAGCCTTGAAATAGTCGAGCAACT
rJMFF021P14-          ATGTCCAATGGCTCATTTGGAACTGTGCTGAAATTAAAGCCTTGAAATAGTCGAGCAACT
                      ____________________________________________________________
consensus             ATGTCCAATGGCTCATTTGGAACTGTGCTGAAATTAAAGCCTTGAAATAGTCGAGCAACT
 
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rJMFF041C07-          GCAACTTGTGTAATTTGTGTTGCATATAAATTTCCAGGACATGATCGTCGTCCAAGACCA
rJMFF021P14-          GCAACTTGTGTAATTTGTGTTGCATATAAATTTCCAGGACATGATCGTCGTCCAAGACCA
                      ____________________________________________________________
consensus             GCAACTTGTGTAATTTGTGTTGCATATAAATTTCCAGGACATGATCGTCGTCCAAGACCA
 
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rJMFF041C07-          AATGGGACAAACTGATACTGTCTATTTTGGGCAGCTTCCCCTTCTAAATTTGTCATGAAC
rJMFF021P14-          AATGGGACAAACTGATACTGTCTATTTTGGGCAGCTTCCCCTTCTAAATTTGTCATGAAC
                      ____________________________________________________________
consensus             AATGGGACAAACTGATACTGTCTATTTTGGGCAGCTTCCCCTTCTAAATTTGTCATGAAC
 
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rJMFF041C07-          CTTTCTGGTAAAAACTTTTCTGGGTCAGGCCAGATTTTAGGATCGCGATGCAATCTCCAC
rJMFF021P14-          CTTTCTGGTAAAAACTTTTCTGGGTCAGGCCAGATTTTAGGATCGCGATGCAATCTCCAC
                      ____________________________________________________________
consensus             CTTTCTGGTAAAAACTTTTCTGGGTCAGGCCAGATTTTAGGATCGCGATGCAATCTCCAC
 
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rJMFF041C07-          ACATTGACGTATAGTTGTGTGCCCTTTGGGATGTGATAGCCATCTACTATACAATCTTCC
rJMFF021P14-          ACATTGACGTATAGTTGTGTGCCCTTTGGGATGTGATAGCCATCTACTATACAATCTTCC
JMFS119H03+                                                       TACTATACAATCTTCC
                      ____________________________________________________________
consensus             ACATTGACGTATAGTTGTGTGCCCTTTGGGATGTGATAGCCATCTACTATACAATCTTCC
 
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rJMFF041C07-          ACCGTTTCGTGTGGAGCTAGGTATGGTCCTTGTGGGTACATTCGCAGTGTTTCTTTAACT
rJMFF021P14-          ACCGCTTCGTGTGGAGCTAGGTATGGTCCTTGTGGGTACATTCGCAGTGTTTCTTTAACT
JMFS119H03+           ACCGCTTCGTGTGGAGCTAGGTATGGTCCTTGTGGGTACATTCGCAGTGTTTCTTTAACT
                      ____________________________________________________________
consensus             ACCGCTTCGTGTGGAGCTAGGTATGGTCCTTGTGGGTACATTCGCAGTGTTTCTTTAACT
 
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rJMFF041C07-          ACACCTTGAAGGTATGGTAAATT                                     
rJMFF021P14-          ACACCTTGAAGGTATGGTAAATTCTTAACATCAGAATCTTCTGCCCACCTTTCTTTGCCA
JMFS119H03+           ACACCTTGAAGGTATGGTAAATTCTTAACATCAGAATCTTCTGCCCACCTTTCTTTGCCA
                      ____________________________________________________________
consensus             ACACCTTGAAGGTATGGTAAATTCTTAACATCAGAATCTTCTGCCCACCTTTCTTTGCCA
 
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rJMFF021P14-          ATGTTGGTGTCTATCTCATCCTGAACACGCTTCAACGATTCTGGGTGTTTTAGCAATACA
JMFS119H03+           ATGTTGGTGTCTATCTCATCCTGAACACGCTTCAACGATTCTGGGTGTTTTAGCAATACA
                      ____________________________________________________________
consensus             ATGTTGGTGTCTATCTCATCCTGAACACGCTTCAACGATTCTGGGTGTTTTAGCAATACA
 
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rJMFF021P14-          GCCAATATCCATGTCAAGTGAGTCGCAAACGTTTCACTAGCATCTTGTAACATACTCAAT
JMFS119H03+           GCCAATATCCATGTCAAGTGAGTCGCAAACGTTTCACTAGCATCTTGTAACATACTCAAT
                      ____________________________________________________________
consensus             GCCAATATCCATGTCAAGTGAGTCGCAAACGTTTCACTAGCATCTTGTAACATACTCAAT
 
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rJMFF021P14-          ACAATTGCTTTGA                                               
JMFS119H03+           ACAATTGCTTTGATTACTGTGTCCCGGGAGTAACTGTAACCTTGGGTAAATTGATCATCA
                      ____________________________________________________________
consensus             ACAATTGCTTTGATTACTGTGTCCCGGGAGTAACTGTAACCTTGGGTAAATTGATCATCA
 
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JMFS119H03+           ATCATAGAAAGCATAACATCAATAAACTTTTGATCTTCATTACTTCTCCTCTCCTTCCTC
                      ____________________________________________________________
consensus             ATCATAGAAAGCATAACATCAATAAACTTTTGATCTTCATTACTTCTCCTCTCCTTCCTC
 
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JMFS119H03+           CTAGCATCCACCCAATCTTGCAAGATGGCATCCACATCCTTTGCAGCTCTTTTCATGGTC
                      ____________________________________________________________
consensus             CTAGCATCCACCCAATCTTGCAAGATGGCATCCACATCCTTTGCAGCTCTTTTCATGGTC
 
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JMFS119H03+           TTGACATGGCCTTCATAGTCCAACCACCTGAAAAACCAGAGTGGAAATATGGCATCCCCG
                      ____________________________________________________________
consensus             TTGACATGGCCTTCATAGTCCAACCACCTGAAAAACCAGAGTGGAAATATGGCATCCCCG
 
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JMFS119H03+           GAGACAAACTCACCCCACAGATACATAACTTGGCTAAACACCTTCTTGAGACGCTGTGCC
                      ____________________________________________________________
consensus             GAGACAAACTCACCCCACAGATACATAACTTGGCTAAACACCTTCTTGAGACGCTGTGCC
 
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JMFS119H03+           TCCTCGTTGATCGTCCCGTCACTCCGGTACTCGTACCTCCTGCCGGCGACTATCTGCATT
JMFF041C07+              TCGTTGATCGTCCCGTCACTCCGGTACTCGTACCTCCTGCCGGCGACTATCTGCATT
                      ____________________________________________________________
consensus             TCCTCGTTGATCGTCCCGTCACTCCGGTACTCGTACCTCCTGCCGGCGACTATCTGCATT
 
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JMFS119H03+           ATCAAA                                                      
JMFF021P14+                                            CTCATGTTCACTTTGGGAGCGGAGGGG
JMFF041C07+           ATCAAATTCAACGTTAAATGTCCGAACCATCTGCTCATGTTCACTTTGGGAGCGGAGGGG
                      ____________________________________________________________
consensus             ATCAAATTCAACGTTAAATGTCCGAACCATCTGCTCATGTTCACTTTGGGAGCGGAGGGG
 
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JMFF021P14+           TTGTTGTTATCCATGGAAATAAAAGTGTAGAGTTCTTTGATGTTGGTTTGCAGCTCCGAC
JMFF041C07+           TTGTTGTTATCCATGGAAATAAAAGTGTAGAGTTCTTTGATGTTGGTTTGCAGCTCCGAC
                      ____________________________________________________________
consensus             TTGTTGTTATCCATGGAAATAAAAGTGTAGAGTTCTTTGATGTTGGTTTGCAGCTCCGAC
 
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JMFF021P14+           ACCCAAACATGTTTCAGTTTCTCAAGTCTTCTGCTGGAGAGTATCTCCTCCACCACCAAT
JMFF041C07+           ACCCAAACATGTTTCAGTTTCTCAAGTCTTCTGCTGGAGAGTATCTCCTCCACCACCAAT
                      ____________________________________________________________
consensus             ACCCAAACATGTTTCAGTTTCTCAAGTCTTCTGCTGGAGAGTATCTCCTCCACCACCAAT
 
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JMFF021P14+           TTTCGTACTCTTCGCCAATATGAATTATTTGTTGAGAAAGTAAAGACCGCATAATCGTAG
JMFF041C07+           TTTCGTACTCTTCGCCAATATGAATTATTTGTTGAGAAAGTAAAGACCGCATAATCGTAG
                      ____________________________________________________________
consensus             TTTCGTACTCTTCGCCAATATGAATTATTTGTTGAGAAAGTAAAGACCGCATAATCGTAG
 
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JMFF021P14+           CCAAGGTATTTACCTGCACATGTAGTTGGACGTGCAGCCAAGAGCTTATCGTTAGTAGCG
JMFF041C07+           CCAAGGTATTTACCTGCACATGTAGTTGGACGTGCAGCCAAGAGCTTATCGTTAGTAGCG
                      ____________________________________________________________
consensus             CCAAGGTATTTACCTGCACATGTAGTTGGACGTGCAGCCAAGAGCTTATCGTTAGTAGCG
 
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JMFF021P14+           AAGCAATCCCTGACGGCTTCCCAGCTACTAACCACCAGGATCCGGGATATGCCGAGGCGG
JMFF041C07+           AAGCAATCCCTGACGGCTTCCCAGCTACTAACCACCAGGATCCGGGATATGCCGAGGCGG
                      ____________________________________________________________
consensus             AAGCAATCCCTGACGGCTTCCCAGCTACTAACCACCAGGATCCGGGATATGCCGAGGCGG
 
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JMFF021P14+           ATGGTGAACACCGGACCATATTTATCCGCCCACTCGCTCAAAGTCTTAACCAAAGGAACC
JMFF041C07+           ATGGTGAACACCGGACCATATTTATCCGCCCACTCGCTCAAAGTCTTAACCAAAGGAACC
                      ____________________________________________________________
consensus             ATGGTGAACACCGGACCATATTTATCCGCCCACTCGCTCAAAGTCTTAACCAAAGGAACC
 
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JMFF021P14+           GAGGTTCGGAAGTGGTGGAGGTGGCCAATAATAGGCCACGCGCCACCTGCCTCCGGTGGC
JMFF041C07+           GAGGTTCGGAAGTGGTGGAGGTGGCCAATAATAGGCCACGCGCCACCTGCCTCCGGTGGC
                      ____________________________________________________________
consensus             GAGGTTCGGAAGTGGTGGAGGTGGCCAATAATAGGCCACGCGCCACCTGCCTCCGGTGGC
 
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JMFF021P14+           AATCTCTTGCTCTGTTTTCGCCATGAAAACCAAAGCAGCACCAAAGCTGCAATGCCAAGA
JMFF041C07+           AATCTCTTGCTCTGTTTTCGCCATGAAAACCAAAGCAGCACCAAAGCTGCAATGCCAAGA
                      ____________________________________________________________
consensus             AATCTCTTGCTCTGTTTTCGCCATGAAAACCAAAGCAGCACCAAAGCTGCAATGCCAAGA
 
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JMFF021P14+           ATGGATGATAAACAACACGGAACCGCATCCATGACACACTTAATTCTCTCACTC      
JMFF041C07+           ATGGATGATAAACAACACGGAACCGCATCCATGACACACTTAATTCTCTCACTCGAGTAT
                      ____________________________________________________________
consensus             ATGGATGATAAACAACACGGAACCGCATCCATGACACACTTAATTCTCTCACTCGAGTAT