Contig 000230:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF025K19-                TAATTTCNCAGCACTTTTATGTACATGGATTACAAGAATGTACCAACGTCCAAC
rJMFF026C13-                TAATTTCACAGCACTTTTATGTACATGGATTACAAGAATGTACCAACGTCCAAC
                      ____________________________________________________________
consensus                   TAATTTCACAGCACTTTTATGTACATGGATTACAAGAATGTACCAACGTCCAAC
 
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rJMFF025K19-          CTCAATCCATATATATGATGAAAAGATGGAATTAGTTGATATTGAACTTGTTCAGGTCGG
rJMFF026C13-          CTCAATCCATATATATGATGAAAAGATGGAATTAGTTGATATTGAACTTGTTCAGGTCGG
JMFN017I13+                                            AGTTGATATTGAACTGTTTCAGGTCGG
                      ____________________________________________________________
consensus             CTCAATCCATATATATGATGAAAAGATGGAATTAGTTGATATTGAACTTGTTCAGGTCGG
 
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rJMFF025K19-          TCAAAATGGAGTCCGCCGCGACGCTGTAAACCGTCACCTGCTTACCCGATGTCTTTACAT
rJMFF026C13-          TCAAAATGGAGTCCGCCGCGACGCTGTAAACCGTCACCTGCTTACCCGATGTCTTTACAT
JMFN017I13+           TCAAAATGGAGTCCGCCGCAACGCTGTAAACCGTCACCTGCTTACCCGATGTCTTTACAT
JMFN036K02+                                           GTCACCTGCTTACCCGATGTCTTTACAT
                      ____________________________________________________________
consensus             TCAAAATGGAGTCCGCCGCGACGCTGTAAACCGTCACCTGCTTACCCGATGTCTTTACAT
 
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rJMFF025K19-          ATTGGTCCTCAACCCCGACGGTTCCAAGCTTTTCCATACACCATCTGACGCCGTCGATGG
rJMFF026C13-          ATTGGTCCTCAACCCCGACGGTTCCAAGCTTTTCCATACACCATCTGACGCCGTCGATGG
JMFN017I13+           ATTGGTCCTCAACCCCGACGGTTCCAAGCTTTTCCATACACCATCTGACGCCGTCGATGG
JMFN036K02+           ATTGGTCCTCAACCCCGACGGTTCCAAGCTTTTCCATACACCATCTGACGCCGTCGATGG
JMFF040O10+                                                                 CGATGG
                      ____________________________________________________________
consensus             ATTGGTCCTCAACCCCGACGGTTCCAAGCTTTTCCATACACCATCTGACGCCGTCGATGG
 
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rJMFF025K19-          AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
rJMFF026C13-          AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
JMFN017I13+           AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
JMFN036K02+           AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
JMFF025K19+                 TAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
JMFF026C13+                                  TCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
JMFF040O10+           AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
                      ____________________________________________________________
consensus             AGGTCATAAGCGATAAGCTAGCGTCTTCGCTGGCGCCCATCTCGGACAACGCCGCGGGGT
 
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rJMFF025K19-          GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
rJMFF026C13-          GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
JMFN017I13+           GTTTAAGGATGTTGGCGGCCATCATGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
JMFN036K02+           GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
JMFF025K19+           GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
JMFF026C13+           GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
JMFF040O10+           GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
                      ____________________________________________________________
consensus             GTTTAAGGATGTTGGCGGCCATCCTGAGTTGCAAGGCCGTGCTGTCCAAGAGCCTTGCGC
 
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rJMFF025K19-          ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
rJMFF026C13-          ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
JMFN017I13+           ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
JMFN036K02+           ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
JMFF025K19+           ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
JMFF026C13+           ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
JMFF040O10+           ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
                      ____________________________________________________________
consensus             ACTCGGCATACGCCGTCTTCACGGCAGGACTCCTCGCGACCTTGTTCGCCGCGTACTTGC
 
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rJMFF025K19-          GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
rJMFF026C13-          GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
JMFN017I13+           GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
JMFN036K02+           GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
JMFF025K19+           GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
JMFF026C13+           GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
JMFF040O10+           GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
                      ____________________________________________________________
consensus             GCATCCCCTCCGCGTTGGCCAATCCCGACTCGGCGATTGCGGCGGCCATCGACTCTTGAG
 
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rJMFF025K19-          ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
rJMFF026C13-          ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
JMFN017I13+           ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
JMFN036K02+           ATGATGCCGACGCAACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
JMFF025K19+           ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
JMFF026C13+           ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
JMFF040O10+           ATGATGCCGACGCAACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
                      ____________________________________________________________
consensus             ATGATGCCGACGCGACTAGGGGCTCTTTCGAGAGGTGGTTGATGCAGAACTCGTGGTCGA
 
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rJMFF025K19-          AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGG      
rJMFF026C13-          AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
JMFN017I13+           AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
JMFN036K02+           AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
JMFF025K19+           AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
JMFF026C13+           AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
JMFF040O10+           AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
                      ____________________________________________________________
consensus             AGGTATTGTTGCAGGCTCTTTGGATGAGGGTGAGGTTTAAAGGAGAGGCTGTGGATGGTG
 
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rJMFF026C13-          AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
JMFN017I13+           AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
JMFN036K02+           AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTTATAAGGGAAACCATAACATTAT
JMFF025K19+           AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
JMFF026C13+           AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
JMFF040O10+           AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
                      ____________________________________________________________
consensus             AAACCATCGAGAGGAAACATAAAAGAGTGCCAATATTCATAAGGGAAACCATAACATTAT
 
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rJMFF026C13-          TTGTT                                                       
JMFN017I13+           TTGTTAAAGAACCNCATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTA       
JMFN036K02+           TTGTTAAAGAACC-CATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTACAAATAT
JMFF025K19+           TTGTTAAAGAACC-CATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTACAAATAT
JMFF026C13+           TTGTTAAAGAACC-CATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTACAAATAT
JMFF040O10+           TTGTTAAAGAACC-CATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTACAAATAT
                      ____________________________________________________________
consensus             TTGTTAAAGAACC-CATGTTATTGGGGAATAGATTGATTGGCAAGAAAGGGTACAAATAT
 
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JMFN036K02+           ATTATTAAAGAGTGTGCCCTTCC                                     
JMFF025K19+           ATTATTAAAGAGTGTGCCCTTCCAAGCTAGATAATGTTTCCTCGACGTTGGCTT      
JMFF026C13+           ATTATTAAAGAGTGTGCCCTTCCAAGCTAGATAATGTTTCCTCGACGTTGGCTT      
JMFF040O10+           ATTATTAAAGAGTGTGCCCTTCCAAGCTAGATAATGTTTCCTCGACGTTGGCTTCCCACA
                      ____________________________________________________________
consensus             ATTATTAAAGAGTGTGCCCTTCCAAGCTAGATAATGTTTCCTCGACGTTGGCTTCCCACA