Contig 000228:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030H05Sequence503000228 (3)ref|XP_009590503.1|173PREDICTED: uncharacterized protein LOC104087669 [Nicotiana tomentosiformis]655000228 (3)gb|KDP25736.1|6e-62hypothetical protein JCGZ_23957 [Jatropha curcas]
JMFF040L10Sequence532000228 (3)ref|XP_009598423.1|137PREDICTED: uncharacterized protein LOC104094252 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF030H05-                                                                 TTGAA
                      ____________________________________________________________
consensus                                                                    TTGAA
 
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rJMFF030H05-          TAGCAAATATGAAATATCCAATCCAGGGAGATGATCTATGCCTAGGAATATATGAAAATC
                      ____________________________________________________________
consensus             TAGCAAATATGAAATATCCAATCCAGGGAGATGATCTATGCCTAGGAATATATGAAAATC
 
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rJMFF030H05-          AGCTCTAACACAGTAAAAACTGCAAACAAATAGGCTCTTGCCACTGTTTCTGGTACAATC
                      ____________________________________________________________
consensus             AGCTCTAACACAGTAAAAACTGCAAACAAATAGGCTCTTGCCACTGTTTCTGGTACAATC
 
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rJMFF030H05-          TCGAGCCAAAAGAAAGAGATGCAGTCATTTTATGCCAATATTTTTATGAAATGTCTCATT
                      ____________________________________________________________
consensus             TCGAGCCAAAAGAAAGAGATGCAGTCATTTTATGCCAATATTTTTATGAAATGTCTCATT
 
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rJMFF030H05-          AGTACCTTTATCAACAAAACTGATCTCCAAAGTACTGGGAGGAAGCCTCAAGGGTAGAGA
                      ____________________________________________________________
consensus             AGTACCTTTATCAACAAAACTGATCTCCAAAGTACTGGGAGGAAGCCTCAAGGGTAGAGA
 
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rJMFF030H05-          TGCTCACTACAAGTTCTTGAAGGCTGAATCGTGAGATGGTTTATTCGGTGTTAACTTTGC
                      ____________________________________________________________
consensus             TGCTCACTACAAGTTCTTGAAGGCTGAATCGTGAGATGGTTTATTCGGTGTTAACTTTGC
 
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rJMFF030H05-          TAACAATGCCTTGTTATGACAATGCTCCGTGTCGACAAAATAAAAGCTCCCATTGGCCTT
                      ____________________________________________________________
consensus             TAACAATGCCTTGTTATGACAATGCTCCGTGTCGACAAAATAAAAGCTCCCATTGGCCTT
 
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rJMFF030H05-          GAATGTCACGAATGGTCTATTTGTCTGCTGGCTTGATATCTGCAAATTTGATAGTTCTTG
                      ____________________________________________________________
consensus             GAATGTCACGAATGGTCTATTTGTCTGCTGGCTTGATATCTGCAAATTTGATAGTTCTTG
 
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rJMFF030H05-          GAATATATGTTGCCAGCCATGACATCATCTCCACCTCAAAACTGTCCGAGCCAGGCTGCC
                      ____________________________________________________________
consensus             GAATATATGTTGCCAGCCATGACATCATCTCCACCTCAAAACTGTCCGAGCCAGGCTGCC
 
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rJMFF030H05-          ACCTGAGTTTGTGAATGTAGGGGCTCACGAACCAGTGAAGGGCCCCAGTCGTAGTAGCGC
JMFF030H05+                                       GAACCAGTGAAGGGCCCCAGTCGTAGTAGCGC
JMFF040L10+                   TTGTGAATGTAGGGGCTCACGAACCAGTGAAGGGCCCCAGTCGTAGTAGCGC
                      ____________________________________________________________
consensus             ACCTGAGTTTGTGAATGTAGGGGCTCACGAACCAGTGAAGGGCCCCAGTCGTAGTAGCGC
 
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rJMFF030H05-          TCAAGAATATGACGGTGGATGCCACCGCTCCC-TTCAGGATCACATTCATGTCGGGAGAT
JMFF030H05+           TCAAGAATATGACGGTGGATGCCACCGCTCCC-TTCAGGATCACATTCATGTCGGGAGAT
JMFF040L10+           TCAAGAATATGACGGTGGATGCCACCGCTCCCTTTCAGGATCACATTCATGTCGGGAGAT
                      ____________________________________________________________
consensus             TCAAGAATATGACGGTGGATGCCACCGCTCCC-TTCAGGATCACATTCATGTCGGGAGAT
 
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rJMFF030H05-          GTCATGAAGGTTATCACCGGGCCTAAGGATACAGAGAGGCAGCAGGTCGAC         
JMFF030H05+           GTCATGAAGGTTATCACCGGGCCTAAGGATACAGAGAGGCAGCAGGTCGACAGGGAGAGA
JMFF040L10+           GTCATGAAGGTTATCACCGGGCCTAAGGATACAGAGAGGCAGCAGGTCGACAGGGAGAGA
                      ____________________________________________________________
consensus             GTCATGAAGGTTATCACCGGGCCTAAGGATACAGAGAGGCAGCAGGTCGACAGGGAGAGA
 
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JMFF030H05+           AGCTTCACTTTCTTGATGGTATTTGAGATTGGACCATAATAGATGACACCTGTGTCTTTT
JMFF040L10+           AGCTTCACTTTCTTGATGGTATTTGAGATTGGACCATAATAGATGACACCTGTGTCTTTT
                      ____________________________________________________________
consensus             AGCTTCACTTTCTTGATGGTATTTGAGATTGGACCATAATAGATGACACCTGTGTCTTTT
 
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JMFF030H05+           TCATCGTTTCCCACATCATTTCCTTTACGAGGTCCAATACTAATCTTGTTATCCTCTTCT
JMFF040L10+           TCATCGTTTCCCACATCATTTCCTTTACGAGGTCCAATACTAATCTTGTTATCCTCTTCT
                      ____________________________________________________________
consensus             TCATCGTTTCCCACATCATTTCCTTTACGAGGTCCAATACTAATCTTGTTATCCTCTTCT
 
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JMFF030H05+           GCTGAGATGGATTTAGATAACCATCTCTTCTGGACAGTAGCAAGCTGCCTTGCATAATTG
JMFF040L10+           GCTGAGATGGATTTAGATAACCATCTCTTCTGGACAGTAGCAAGCTGCCTTGCATAATTG
                      ____________________________________________________________
consensus             GCTGAGATGGATTTAGATAACCATCTCTTCTGGACAGTAGCAAGCTGCCTTGCATAATTG
 
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JMFF030H05+           CTATCCGTTTTAGCATGCGTATAAGAAAAGGTCCCAGAACTACCCAGATGAAAACCTGAT
JMFF040L10+           CTATCCGTTTTAGCATGCGTATAAGAAAAGGTCCCAGAACTACCCAGATGAAAACCTGAT
                      ____________________________________________________________
consensus             CTATCCGTTTTAGCATGCGTATAAGAAAAGGTCCCAGAACTACCCAGATGAAAACCTGAT
 
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JMFF030H05+           CGGAAATAGGTGGAATTGAGACGAGTAGCCTGGGATCGAGCCAAACGAAAGAGCGCTGCA
JMFF040L10+           CGGAAATAGGTGGAATTGAGACGAGTAGCCTGGGATCGAGCCAAACGAAAGAGCGCTGCA
                      ____________________________________________________________
consensus             CGGAAATAGGTGGAATTGAGACGAGTAGCCTGGGATCGAGCCAAACGAAAGAGCGCTGCA
 
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JMFF030H05+           GCTCCTGCCATTTTTCCCGAGAGGAATTTGGATTCCGATACTCAATTTTGGT        
JMFF040L10+           GCTCCTGCCATTTTTCCCGAGAGGAATTTGGATTCCGATACTCAATTTTGGTAAGCCCTC
                      ____________________________________________________________
consensus             GCTCCTGCCATTTTTCCCGAGAGGAATTTGGATTCCGATACTCAATTTTGGTAAGCCCTC