Contig 000227:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K07Sequence107000227 (5)770004166 (10)gb|KDP30456.1|1e-59hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF014B13Sequence386000227 (5)544004166 (10)gb|KDP30456.1|6e-12hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF040I13Sequence436000227 (5)704004166 (10)gb|KDP30456.1|4e-51hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF041P22Sequence604000227 (5)598004166 (10)gb|KDP30456.1|2e-41hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF047P10Sequence587000227 (5)479004166 (10)

Alignment

This contig is upended


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JMFF012K07+                                             AGCACCACCACCACCTCCACCACCTC
JMFF041P22+                                                                  ACCTC
                      ____________________________________________________________
consensus                                               AGCACCACCACCACCTCCACCACCTC
 
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JMFF012K07+           CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
JMFF041P22+           CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
JMFF047P10+                        GAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
                      ____________________________________________________________
consensus             CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
 
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JMFF012K07+           GCCCGCCATAATGCAACCTAT                                       
JMFF041P22+           GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
JMFF047P10+           GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
                      ____________________________________________________________
consensus             GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
 
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JMFF041P22+           CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
JMFF047P10+           CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
JMFF040I13+                                                       GTAGCAGGTTTGTTTC
                      ____________________________________________________________
consensus             CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
 
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JMFF041P22+           TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
JMFF047P10+           TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
JMFF014B13+                                             ATTAGACGGAGCAACTGCGGCGGCAC
JMFF040I13+           TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
                      ____________________________________________________________
consensus             TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
 
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JMFF041P22+           CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF047P10+           CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF014B13+           CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF040I13+           CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
                      ____________________________________________________________
consensus             CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
 
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JMFF041P22+           CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF047P10+           CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF014B13+           CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF040I13+           CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
                      ____________________________________________________________
consensus             CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
 
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JMFF041P22+           CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
JMFF047P10+           CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
JMFF014B13+           CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCNCTTTATTATTATC
JMFF040I13+           CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
                      ____________________________________________________________
consensus             CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
 
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JMFF041P22+           GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF047P10+           GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF014B13+           GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF040I13+           GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
                      ____________________________________________________________
consensus             GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
 
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JMFF041P22+           CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF047P10+           CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF014B13+           CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF040I13+           CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
                      ____________________________________________________________
consensus             CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
 
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JMFF041P22+           GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT 
JMFF047P10+           GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT 
JMFF014B13+           GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT 
JMFF040I13+           GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTTT
                      ____________________________________________________________
consensus             GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTTT