Contig 000227:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012K07Sequence107000227 (5)770004166 (10)gb|KDP30456.1|1e-59hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF014B13Sequence386000227 (5)544004166 (10)gb|KDP30456.1|6e-12hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF040I13Sequence436000227 (5)704004166 (10)gb|KDP30456.1|4e-51hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF041P22Sequence604000227 (5)598004166 (10)gb|KDP30456.1|2e-41hypothetical protein JCGZ_17126 [Jatropha curcas]
JMFF047P10Sequence587000227 (5)479004166 (10)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF012K07+ AGCACCACCACCACCTCCACCACCTC
JMFF041P22+ ACCTC
                      ____________________________________________________________
consensus AGCACCACCACCACCTCCACCACCTC
 
. : . : . : . : . : . :
JMFF012K07+ CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
JMFF041P22+ CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
JMFF047P10+ GAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
                      ____________________________________________________________
consensus CACCCCCACCACGGAATTCATTCCTGGGACCATTCCATCGACTTACCCCAGCAGCAGGCG
 
. : . : . : . : . : . :
JMFF012K07+ GCCCGCCATAATGCAACCTAT
JMFF041P22+ GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
JMFF047P10+ GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
                      ____________________________________________________________
consensus GCCCGCCATAATGCAACCTATCATTCCCTGACCCTGGTGCTGCAACTGCAACAGCAGCAG
 
. : . : . : . : . : . :
JMFF041P22+ CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
JMFF047P10+ CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
JMFF040I13+ GTAGCAGGTTTGTTTC
                      ____________________________________________________________
consensus CAGCACTAGCATAGGAACCTGTCGCAGGTTTCGGAGGCTCCGAGGTAGCAGGTTTGTTTC
 
. : . : . : . : . : . :
JMFF041P22+ TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
JMFF047P10+ TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
JMFF014B13+ ATTAGACGGAGCAACTGCGGCGGCAC
JMFF040I13+ TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
                      ____________________________________________________________
consensus TAAGGTGCGGCGGAACATAAGCTTGTTTGGTTGAATTAGACGGAGCAACTGCGGCGGCAC
 
. : . : . : . : . : . :
JMFF041P22+ CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF047P10+ CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF014B13+ CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
JMFF040I13+ CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
                      ____________________________________________________________
consensus CTTCGGCCGCGGAAACAGAATCAGCCCACGATGTTGGCATACTCTCAAAGGCGAATCAAA
 
. : . : . : . : . : . :
JMFF041P22+ CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF047P10+ CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF014B13+ CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
JMFF040I13+ CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
                      ____________________________________________________________
consensus CAAAAAGCACCAATTTTTATTGTTTTCTCTCCTCCAAAACCCTCAATTTCAAAAATTAAA
 
. : . : . : . : . : . :
JMFF041P22+ CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
JMFF047P10+ CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
JMFF014B13+ CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCNCTTTATTATTATC
JMFF040I13+ CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
                      ____________________________________________________________
consensus CTCACGCAACCCGTGATCCAACCGGTGAATTGAAACAAAGATTCTCACTTTATTATTATC
 
. : . : . : . : . : . :
JMFF041P22+ GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF047P10+ GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF014B13+ GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
JMFF040I13+ GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
                      ____________________________________________________________
consensus GACAAACGTCAAATGAAAACCCTCACAATTTTCGTCAGCATCAAACAACAAAACCCAAAT
 
. : . : . : . : . : . :
JMFF041P22+ CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF047P10+ CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF014B13+ CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
JMFF040I13+ CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
                      ____________________________________________________________
consensus CCTTGTTCTTTTTCCTCGTTCTCGAAGCTTCACATCAGAAAGAAAACCGACGGAAGGGAA
 
. : . : . : . : . : . :
JMFF041P22+ GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT
JMFF047P10+ GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT
JMFF014B13+ GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTT
JMFF040I13+ GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTTT
                      ____________________________________________________________
consensus GAAACCCTAAAGTTGCGATCTTTGGAGGGGAAGAGAGGGAGGGAGGCAAAAATATCTTTT