Contig 000224:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006I24Sequence599000224 (7)ref|XP_011087000.1|2e-62PREDICTED: galactose oxidase-like [Sesamum indicum]804009619 (8)ref|XP_010663077.1|293PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]
JMFF028J18Sequence521000224 (7)ref|XP_011087000.1|4e-51PREDICTED: galactose oxidase-like [Sesamum indicum]667009619 (8)ref|XP_010663077.1|274PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]
JMFF030M21Sequence291000224 (7)ref|XP_011087000.1|6e-20PREDICTED: galactose oxidase-like [Sesamum indicum]132009619 (8)ref|XP_010663077.1|70.5PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]
JMFF032N10Sequence574000224 (7)ref|XP_011087000.1|3e-57PREDICTED: galactose oxidase-like [Sesamum indicum]756009619 (8)ref|XP_004138264.1|127PREDICTED: uncharacterized protein LOC101204692 [Cucumis sativus] ref|XP_0041698
JMFF036O21Sequence518000224 (7)ref|XP_011087000.1|9e-52PREDICTED: galactose oxidase-like [Sesamum indicum]711009619 (8)ref|XP_010663077.1|267PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]
JMFF039K24Sequence489000224 (7)ref|XP_011087000.1|2e-46PREDICTED: galactose oxidase-like [Sesamum indicum]705009619 (8)ref|XP_010663077.1|277PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]
JMFF039N10Sequence608000224 (7)ref|XP_011087000.1|2e-63PREDICTED: galactose oxidase-like [Sesamum indicum]728009619 (8)ref|XP_010663077.1|271PREDICTED: uncharacterized protein LOC100253501 [Vitis vinifera]

Alignment

This contig is upended


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JMFF039N10+                                                               CCCGGGAG
                      ____________________________________________________________
consensus                                                                 CCCGGGAG
 
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JMFF032N10+                                     CATCATACAAATGCTTCTTCCCCGGCTTCCAATT
JMFF006I24+            ATCTGATTAGAAGCGTACCATCTCTCATCATACAAATGCTTCTTCCCCGGCTTCCAATT
JMFF039N10+           GATCTGATTAGAAGCGTACCATCTCTCATCATACAAATGCTTCTTCCCCGGCTTCCAATT
                      ____________________________________________________________
consensus             GATCTGATTAGAAGCGTACCATCTCTCATCATACAAATGCTTCTTCCCCGGCTTCCAATT
 
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JMFF032N10+           ACACGTCTTGTCAACACACGGGGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
JMFF028J18+                              GGGGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
JMFF036O21+                                GGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
JMFF006I24+           ACACGTCTTGTCAACACACGGGGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
JMFF039N10+           ACACGTCTTGTCAACACACGGGGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
JMFF039K24+                                                                    CCC
                      ____________________________________________________________
consensus             ACACGTCTTGTCAACACACGGGGCAAAAAACTGGATCCGCTTCGACCCGTCGCGGTACCC
 
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JMFF032N10+           GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
JMFF028J18+           GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
JMFF036O21+           GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
JMFF006I24+           GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
JMFF039N10+           GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
JMFF039K24+           GCCGGTCTGCATGATCGTCCCGTTGNTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
                      ____________________________________________________________
consensus             GCCGGTCTGCATGATCGTCCCGTTGCTGAGAATCGTGCCGGAGGAGCACCATGTGTCGGA
 
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JMFF032N10+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
JMFF028J18+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
JMFF036O21+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
JMFF006I24+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
JMFF039N10+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
JMFF039K24+           GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
                      ____________________________________________________________
consensus             GATGAAACGGAGGGGGCGGATGGTGTTGTTCAGAACGTCGTACTCGACGGAGTGAGCGTA
 
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JMFF032N10+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
JMFF028J18+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
JMFF036O21+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
JMFF006I24+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
JMFF039N10+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
JMFF030M21+                                   TCTGGAGCCCTTGCACCTAGTCCCGTTGAAGCGTCG
JMFF039K24+           GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
                      ____________________________________________________________
consensus             GCAAGAGGGATCCGACAGGTCTTCTCTGGAGCCCTTGCATCTAGTCCCGTTGAAGCGTCG
 
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JMFF032N10+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF028J18+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF036O21+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF006I24+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF039N10+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF030M21+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
JMFF039K24+           CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
                      ____________________________________________________________
consensus             CCTGAGCTGGTACCCGGACCTGCCGGAGCCCCGCTGGTCGAAGAACACGACGGTGTTCCG
 
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JMFF032N10+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
JMFF028J18+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
JMFF036O21+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
JMFF006I24+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
JMFF039N10+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
JMFF030M21+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTATTTTCCATGAGAGTTTGCCATCT
JMFF039K24+           GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
                      ____________________________________________________________
consensus             GTGAGTGAGTGCCATGTGCATGGCCACAACTCCGGTGTTTTCCATGAGAGTTTGCCATCT
 
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JMFF032N10+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF028J18+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF036O21+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF006I24+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF039N10+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF030M21+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
JMFF039K24+           GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
                      ____________________________________________________________
consensus             GCCTTGTCCGCTCGCGGCTTCGCTGACCAGAACCGATGCATTTAAGGCGTTGCATGGCCT
 
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JMFF032N10+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF028J18+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF036O21+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF006I24+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF039N10+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF030M21+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
JMFF039K24+           GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
                      ____________________________________________________________
consensus             GAGAGATACGAGAAACAGGACGAGCAGTGCCGTGATCGCGCATGGGAGAGTAGTTCGGAG
 
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JMFF032N10+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCTT
JMFF028J18+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCTT
JMFF036O21+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCT 
JMFF006I24+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCTT
JMFF039N10+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGAATCTT
JMFF030M21+           TTGATGAGTCTCCAT                                             
JMFF039K24+           TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCTT
                      ____________________________________________________________
consensus             TTGATGAGTCTCCATGACAGTGGAAGTAGTAGGGAGAATTTGCTGAGTTATACGATTCTT