Contig 000210:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF032I24Sequence627000210 (2)gb|KDO61238.1|1e-105hypothetical protein CISIN_1g0184282mg, partial [Citrus sinensis]580023375ref|XP_011080353.1|149PREDICTED: uncharacterized protein LOC105163626 [Sesamum indicum]
JMFF036O23Sequence559000210 (2)gb|KDO61238.1|2e-83hypothetical protein CISIN_1g0184282mg, partial [Citrus sinensis]634024381ref|XP_011080353.1|192PREDICTED: uncharacterized protein LOC105163626 [Sesamum indicum]

Alignment

This contig is upended


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JMFF032I24+                                                            ATAAAAGAAGG
                      ____________________________________________________________
consensus                                                              ATAAAAGAAGG
 
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JMFF032I24+           CATAGTATGAGGAGGAGGAGGCTGGCACATGAGTAGAGTATAATGAGCTTGCACCGATGG
                      ____________________________________________________________
consensus             CATAGTATGAGGAGGAGGAGGCTGGCACATGAGTAGAGTATAATGAGCTTGCACCGATGG
 
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JMFF032I24+           GGATACACAGGAAATAAGCAGATTGCTAATGTCAAAACTGGCCAGGAAAATGAGAGAAGC
JMFF036O23+                                                        GAAAATGAGAGAAGT
                      ____________________________________________________________
consensus             GGATACACAGGAAATAAGCAGATTGCTAATGTCAAAACTGGCCAGGAAAATGAGAGAAGT
 
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JMFF032I24+           GTTTGCCAAAGGGCACTTCGTTTTTCAAATGTCCAAGCAAAAAAGGCATCATTTTCAGAG
JMFF036O23+           GTTTGCCAGAGAGGCCTTCGTCTCACAAATGTCCATGCAAAAAAGGCATCATTTTCAGAA
                      ____________________________________________________________
consensus             GTTTGCCAGAGGGGCCTTCGTTTTTCAAATGTCCATGCAAAAAAGGCATCATTTTCAGAG
 
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JMFF032I24+           AACACTTGATCATGATATATCTCCAAATGCGCTGGCCAAGTAGACAACTTTTTCTTTCCA
JMFF036O23+           AACACTTGATCATGGTATATCTCCAAGTGTGCAGGCCAAGTAGACAACTTTTTCTTCCCA
                      ____________________________________________________________
consensus             AACACTTGATCATGGTATATCTCCAAGTGTGCTGGCCAAGTAGACAACTTTTTCTTTCCA
 
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JMFF032I24+           GGCCGAACAATTTTTACTACACGGTCACAACGCAGTAGTAGATTCTTTCTAAGCAAAGTA
JMFF036O23+           GGTCGAACAGTTTTTACTACACGGTCACAACGCAGTAGAAGATTTCTTCTAAGAAGAGCA
                      ____________________________________________________________
consensus             GGTCGAACAGTTTTTACTACACGGTCACAACGCAGTAGTAGATTTTTTCTAAGCAGAGTA
 
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JMFF032I24+           TTTGCAATATCATCAGTTTCCAAATTTTTATCTGATTCCAGTATATCTTTAAATTCTGGG
JMFF036O23+           TTGGCAATATCTTCAGTTTCCAAATTTTTATCTGAATCTAGTATGTCTTTAAGCTCTGGA
                      ____________________________________________________________
consensus             TTTGCAATATCTTCAGTTTCCAAATTTTTATCTGATTCTAGTATGTCTTTAAGTTCTGGG
 
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JMFF032I24+           TGATTTCTCATAAAGCTCACAAAGTCTTTTCCTCTGAAATACTCAACTCGAGTTTCCTGC
JMFF036O23+           TGATTCCGCATAAAGCTTACAAAATCCTTTCCTCTAAAATACTCAACTCGAGTTTCCTGT
                      ____________________________________________________________
consensus             TGATTTCTCATAAAGCTTACAAAGTCTTTTCCTCTGAAATACTCAACTCGAGTTTCCTGT
 
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JMFF032I24+           AGGACAGCCCATCTTGACATCAAGTCCTTGTGATCTCTCACTTTCTCGGCAAATGACTGG
JMFF036O23+           AGGACAGCCCATCTAGACTCCAAGTCCTTGTGATCTCTTACTTTCTCGGCAAATGACTGA
                      ____________________________________________________________
consensus             AGGACAGCCCATCTTGACTTCAAGTCCTTGTGATCTCTTACTTTCTCGGCAAATGACTGG
 
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JMFF032I24+           AAAACATCCTTCTTTGCAGATTGTTTCTTTGGAGGAGCATCGCCGGTGGGATTCGAACCG
JMFF036O23+           AAAACATCCTTCTTTGTAGCTTGTTTCTTAGAAGGTATATCGGCGGCGGGATTAGAACCG
                      ____________________________________________________________
consensus             AAAACATCCTTCTTTGTAGCTTGTTTCTTTGGAGGTGTATCGGCGGTGGGATTCGAACCG
 
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JMFF032I24+           TTCGGTACAGAACCGGCGGATCGCCGGACCCTCTTCTTCTCTGCTCCTGCCGGTTTCTTC
JMFF036O23+           TTGGATGCCAAACCGGAGGATCGCCGGACCCTCTTCTTCTCCGATCCCGCCGGTTTCTTC
                      ____________________________________________________________
consensus             TTGGGTGCCGAACCGGCGGATCGCCGGACCCTCTTCTTCTCTGCTCCTGCCGGTTTCTTC
 
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JMFF032I24+           ATCTCTCT                                                    
JMFF036O23+           ATCTCTCTGTGTCAGCGAGCTGCGAGGGTGTCTTTTTCTGTTCTGTTAGAAATTAGAAAT
                      ____________________________________________________________
consensus             ATCTCTCTGTGTCAGCGAGCTGCGAGGGTGTCTTTTTCTGTTCTGTTAGAAATTAGAAAT