| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF016K02 | Sequence | 329 | 000209 (5) | ref|XP_009775473.1| | 1e-18 | PREDICTED: protein NRT1/ PTR FAMILY 2.13-like [Nicotiana sylvestris] | |||||
| JMFF036O04 | Sequence | 404 | 000209 (5) | ref|XP_009775473.1| | 4e-31 | PREDICTED: protein NRT1/ PTR FAMILY 2.13-like [Nicotiana sylvestris] | 692 | 001337 (4) | emb|CDP00275.1| | 1e-65 | unnamed protein product [Coffea canephora] |
| JMFF040O09 | Sequence | 480 | 000209 (5) | ref|XP_009775473.1| | 1e-42 | PREDICTED: protein NRT1/ PTR FAMILY 2.13-like [Nicotiana sylvestris] | 755 | 001337 (4) | emb|CDP00275.1| | 1e-73 | unnamed protein product [Coffea canephora] |
| JMSF015L06 | Sequence | 559 | 000209 (5) | ref|XP_009775473.1| | 9e-58 | PREDICTED: protein NRT1/ PTR FAMILY 2.13-like [Nicotiana sylvestris] | 733 | 001337 (4) | emb|CDP00275.1| | 6e-97 | unnamed protein product [Coffea canephora] |
| JMSF017P08 | Sequence | 483 | 000209 (5) | ref|XP_009610610.1| | 8e-72 | PREDICTED: protein NRT1/ PTR FAMILY 2.13 isoform X1 [Nicotiana tomentosiformis] | 727 | 001337 (4) | emb|CDP00275.1| | 3e-90 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMSF017P08+ GGCGAGGGATGTAA
____________________________________________________________
consensus GGCGAGGGATGTAA
. : . : . : . : . : . :
JMSF017P08+ CCGGAGGATCATAATAGCTACTGGTATCATCTGGGAGCTTAACTTTCCTTTTGTTGAACG
____________________________________________________________
consensus CCGGAGGATCATAATAGCTACTGGTATCATCTGGGAGCTTAACTTTCCTTTTGTTGAACG
. : . : . : . : . : . :
JMSF017P08+ CCGCTACGAACACCTGAGCAACGCCGGAGAAGACGCTCCCCTGCGGCTTAACGTAAACGT
____________________________________________________________
consensus CCGCTACGAACACCTGAGCAACGCCGGAGAAGACGCTCCCCTGCGGCTTAACGTAAACGT
. : . : . : . : . : . :
JMSF017P08+ AGACGCGCCTGCCGAGAAAGAACAGCACGATGGAGAGGAGCATGAGCCCCGTGGGGATGC
____________________________________________________________
consensus AGACGCGCCTGCCGAGAAAGAACAGCACGATGGAGAGGAGCATGAGCCCCGTGGGGATGC
. : . : . : . : . : . :
JMSF017P08+ CGAACCCCAGCGCCCAGCTCACGGAGTCTTGGATATACACCACGACTGTCATGGAGAAGA
____________________________________________________________
consensus CGAACCCCAGCGCCCAGCTCACGGAGTCTTGGATATACACCACGACTGTCATGGAGAAGA
. : . : . : . : . : . :
JMSF017P08+ TGAGCACCACCATCAAAGAAGTGTAGTACCAGTTGAAGAAGCTGGTGATCCCCTTCCGGC
____________________________________________________________
consensus TGAGCACCACCATCAAAGAAGTGTAGTACCAGTTGAAGAAGCTGGTGATCCCCTTCCGGC
. : . : . : . : . : . :
JMSF017P08+ CTTCCTCTGTCGTGGCGTCGAACTGGTCCACGCCGAAGGGGATGCTGCACGGCCGGATTC
____________________________________________________________
consensus CTTCCTCTGTCGTGGCGTCGAACTGGTCCACGCCGAAGGGGATGCTGCACGGCCGGATTC
. : . : . : . : . : . :
JMSF017P08+ CGCCGCTGCCGATGGCGAGGAAGCCCAGAGCCAGGAACAGATAACCCATCTGTGAATTTG
JMSF015L06+ CGCTGCCGATGGCGAGGAAGCCCAGAGCCAGGAACAGATAACCCATCTGTGAATTTG
____________________________________________________________
consensus CGCCGCTGCCGATGGCGAGGAAGCCCAGAGCCAGGAACAGATAACCCATCTGTGAATTTG
. : . : . : . : . : . :
JMSF017P08+ TCGGGCCTTTGCAGCCCTGCGGTTGGGTTGTGTTGCACGCCGGTGG
JMSF015L06+ TCGGGCCTTTGCAGCCCTGCGGTTGGGTTGTGTTGCACGCCGGTGGACGGAGGCTTGGAA
____________________________________________________________
consensus TCGGGCCTTTGCAGCCCTGCGGTTGGGTTGTGTTGCACGCCGGTGGACGGAGGCTTGGAA
. : . : . : . : . : . :
JMSF015L06+ CCAGGGCTATTATGGTAAATATCAGCATTCCCAAGATTTCGAATATGGAGGAGACGGCGA
JMFF040O09+ CCAGGGCTATTATGGTAAATATCAGCATTCCCAAGATTTCGAATATGGAGGAGACGGCGA
____________________________________________________________
consensus CCAGGGCTATTATGGTAAATATCAGCATTCCCAAGATTTCGAATATGGAGGAGACGGCGA
. : . : . : . : . : . :
JMSF015L06+ TGGTCCAAAACCTGCCCAGGTAAGAATCGGAAATGAAGGCACCCAACAGGGGGATGAAAC
JMFF040O09+ TGGTCCAAAACCTGCCCAGGTAAGAATCGGAAATGAAGGCACCCAACAGGGGGATGAAAC
JMFF036O04+ CAGGTAAGAATCGGAAATGAAGGCACCCAACAGGGGGATGAAAC
____________________________________________________________
consensus TGGTCCAAAACCTGCCCAGGTAAGAATCGGAAATGAAGGCACCCAACAGGGGGATGAAAC
. : . : . : . : . : . :
JMSF015L06+ TTGTGACTCCTGTCCATATGCCCATCATATTTGCAGCTTCAACTAGGTCCAAGTGATACA
JMFF016K02+ TATTTGCAGCTTCAACTAGGTCCAAGTGATACA
JMFF040O09+ TTGTGACTCCTGTCCATATGCCCATCATATTTGCAGCTTCAACTAGGTCCAAGTGATACA
JMFF036O04+ TTGTGACTCCTGTCCATATGCCCATCATATTTGCAGCTTCAACTAGGTCCAAGTGATACA
____________________________________________________________
consensus TTGTGACTCCTGTCCATATGCCCATCATATTTGCAGCTTCAACTAGGTCCAAGTGATACA
. : . : . : . : . : . :
JMSF015L06+ CTGTCAACAAGAAAATTGAGAAGTTTGCTAGTAACCCCACTGATGCTAGCCTCTCAAATG
JMFF016K02+ CTGTCAACAAGAAAATTGAGAAGTTTGCTAGTAACCCCACTGATGCTAGCCTCTCAAATG
JMFF040O09+ CTGTCAACAAGAAAATTGAGAAGTTTGCTAGTAACCCCACTGATGCTAGCCTCTCAAATG
JMFF036O04+ CTGTCAACAAGAAAATTGAGAAGTTTGCTAGTAACCCCACCGATGCTAGCCTCTCAAATG
____________________________________________________________
consensus CTGTCAACAAGAAAATTGAGAAGTTTGCTAGTAACCCCACTGATGCTAGCCTCTCAAATG
. : . : . : . : . : . :
JMSF015L06+ TCTCATTTCCTAAGACGTAAGGCATGGCTCTCCATCCGCCAGGCTTTCGTTGGGTGGTGG
JMFF016K02+ TCTCATTTCCTAAGACGTAAGGCATGGCTCTCCATCCGCCAGGCTTTCGTTGGGTGGTGG
JMFF040O09+ TCTCATTTCCTAAGACGTAAGGCATGGCTCTCCATCCGCCAGGCTTTCGTTGGGTGGTGG
JMFF036O04+ TCTCATTTCCTAAGACGTAAGGCATGGCTCTCCATCCGCCAGGCTTTCGTTGGGTGGTGG
____________________________________________________________
consensus TCTCATTTCCTAAGACGTAAGGCATGGCTCTCCATCCGCCAGGCTTTCGTTGGGTGGTGG
. : . : . : . : . : . :
JMSF015L06+ TCGCCGCAGCTTTCGCGGCCGGCGAAGCCTCGCCGTGGCGTCCATTTTCAGGCGGCGGCG
JMFF016K02+ TCGCCGCAGCTTTCGCGGCCGGCGAAGCCTCGCCGTGGCGTCCATTTTCAGGCGGCGGCG
JMFF040O09+ TCGCCGCAGCTTTCGCGGCCGGCGAAGCCTCGCCGTGGCGTCCATTTTCAGGCGGCGGCG
JMFF036O04+ TCGCCGCAGCTTTCGCGGCCGGCGAAGCCTCGCCGTGGCGTCCATTTTCAGGCGGCGGCG
____________________________________________________________
consensus TCGCCGCAGCTTTCGCGGCCGGCGAAGCCTCGCCGTGGCGTCCATTTTCAGGCGGCGGCG
. : . : . : . : . : . :
JMSF015L06+ GCGGCGGCGATGAGCGCGGAGAAGAGAGTGGCAAGCTCTTATAAGTACTCCGAGGAGGCC
JMFF016K02+ GCGGCGGCGATGAGCGCGGAGAAGAGAGTGGCAAGCTCTTATAAGTACTCCGAGGAGGCC
JMFF040O09+ GCGGCGGCGATGAGCGCGGAGAAGAGAGTGGCAAGCTCTTATAAGTACTCCGAGGAGGCC
JMFF036O04+ GCGGCGGCGATGAGCGCGGAGAAGAGAGTGGCAAGCTCTTATAAGTACTCCGAGGAGGCC
____________________________________________________________
consensus GCGGCGGCGATGAGCGCGGAGAAGAGAGTGGCAAGCTCTTATAAGTACTCCGAGGAGGCC
. : . : . : . : . : . :
JMSF015L06+ AGGAAGGGCTTCTGTTTTGCT
JMFF016K02+ AGGAAGGGCTTCTGTTTTGCTGAAGATTTTCCCCCTCCATTGTTGAAAGTGC
JMFF040O09+ AGGAAGGGCTTCTGTTTTGCTGAAGATTTTCCCCCTCCATTGTTGAAAGTGC
JMFF036O04+ AGGAAGGGCTTCTGTTTTGCTGAAGATTTTCCCCCTCCATTGTTGAAAGTGCTAATAAAT
____________________________________________________________
consensus AGGAAGGGCTTCTGTTTTGCTGAAGATTTTCCCCCTCCATTGTTGAAAGTGCTAATAAAT