Contig 000208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF036N03Sequence526000208 (4)767006928 (5)ref|XP_009781661.1|2e-83PREDICTED: lysine-specific demethylase JMJ25-like [Nicotiana sylvestris]
JMFF048M11Sequence576000208 (4)610006928 (5)ref|XP_004237549.1|2e-64PREDICTED: lysine-specific demethylase JMJ25-like [Solanum lycopersicum]
JMFS164G05Sequence582000208 (4)
JMSF007N20Sequence333000208 (4)808006928 (5)ref|XP_009781661.1|3e-84PREDICTED: lysine-specific demethylase JMJ25-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFS164G05+                                              TCCATCTTTCCCTCTAAATTCCCCT
                      ____________________________________________________________
consensus                                                TCCATCTTTCCCTCTAAATTCCCCT
 
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JMFS164G05+           TATCTGACGCAAAAACTGTCTCGCTACTAATATTCTTCTTCGGGGGTCTTCCTCTTTTCC
JMFF048M11+                                               TCTTCGGGGGTCTTCCTCTTTTCC
                      ____________________________________________________________
consensus             TATCTGACGCAAAAACTGTCTCGCTACTAATATTCTTCTTCGGGGGTCTTCCTCTTTTCC
 
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JMFS164G05+           GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
JMFF048M11+           GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTNTTATATTCTCCGGCTTTACCATATTTT
JMFF036N03+                         TCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
                      ____________________________________________________________
consensus             GGCGAGGCTTCTGCTCCGGCGGAGAGGCATCTTTTATATTCTCCGGCTTTACCATATTTT
 
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JMFS164G05+           CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
JMFF048M11+           CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
JMFF036N03+           CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
                      ____________________________________________________________
consensus             CAACCTCGGAAGCGCCGTTCATTTTCATTTCACATCCCGCTGAACCCGCATTCCCTTTCC
 
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JMFS164G05+           CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
JMFF048M11+           CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
JMFF036N03+           CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
                      ____________________________________________________________
consensus             CATCAGTAAAACTAACGGCTTCTTCTGGTCGAGTCAGCTCCGGCGACTTCTCCTTTTCCT
 
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JMFS164G05+           CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMFF048M11+           CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMSF007N20+             GGCCGGTACAGTTCGAGCCTNGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
JMFF036N03+           CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
                      ____________________________________________________________
consensus             CCGGCCGGTACAGTTCGAGCCTTGTATCCAAATTCAAGCAGATCTCGAGCTTAACATCCT
 
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JMFS164G05+           GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMFF048M11+           GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMSF007N20+           GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
JMFF036N03+           GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
                      ____________________________________________________________
consensus             GCTCGTTCGATCCCTCCATAGCTCCCACCTTCAGGCTTCAGCCCGCCTACTTAATTGGAA
 
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JMFS164G05+           TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMFF048M11+           TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMSF007N20+           TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
JMFF036N03+           TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
                      ____________________________________________________________
consensus             TATTACAGCAATTTTTCACAGTCAACAGAGTGAAATTCGGCAAAAATCGAGAACAACAAA
 
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JMFS164G05+           TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMFF048M11+           TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMSF007N20+           TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
JMFF036N03+           TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
                      ____________________________________________________________
consensus             TATTCTCTAAAAAAATTCAATTTTTTTGGCCGCTGGATTTGAGGAGTGAGAATGAATGGT
 
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JMFS164G05+           TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMFF048M11+           TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMSF007N20+           TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
JMFF036N03+           TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
                      ____________________________________________________________
consensus             TTTGAAACTGTGGGTGGGAAGAGTGAATGCGGTAAATAAATATGCTTTTTAAAAAATCCC
 
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JMFS164G05+           GCCTTCCCTTCCCTTCC                                           
JMFF048M11+           GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGC  
JMSF007N20+           GCCTTCCCTTCCCTTCCCTATCAATTCATCAATC                          
JMFF036N03+           GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGCAG
                      ____________________________________________________________
consensus             GCCTTCCCTTCCCTTCCCTATCAATTCATCAATCAACAGCAGATTTGGGGGCCGGAGCAG