Contig 000206:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF018O12-                 TTCTTATTTATGTGTCAGAGAATGTCAATAAAGCCAAACTGTAGTGGATAAAT
                      ____________________________________________________________
consensus                    TTCTTATTTATGTGTCAGAGAATGTCAATAAAGCCAAACTGTAGTGGATAAAT
 
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rJMFF018O12-          ATGCTTAAATTTTACAGTAGCAAATTATCCAGAAAATATGTGCATTCAGCAAGCTATCAA
                      ____________________________________________________________
consensus             ATGCTTAAATTTTACAGTAGCAAATTATCCAGAAAATATGTGCATTCAGCAAGCTATCAA
 
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rJMFF018O12-          TTAGGTTTGCTATCAACCTGAAAAAGTTCAGCACAACCATTATATGCTAGGTTGTCTCTC
                      ____________________________________________________________
consensus             TTAGGTTTGCTATCAACCTGAAAAAGTTCAGCACAACCATTATATGCTAGGTTGTCTCTC
 
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rJMFF018O12-          GTAAGCCCTGTATGATAAGCAAGGTAAGGTTGGCCTGCAGCTTGCAACCTTTCCACCATC
JMFS091G07+                                                CAGCTTGCAACCTTTCCACCATC
                      ____________________________________________________________
consensus             GTAAGCCCTGTATGATAAGCAAGGTAAGGTTGGCCTGCAGCTTGCAACCTTTCCACCATC
 
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rJMFF018O12-          AGCCTGCCAAGAGATAGGATTTCAGTGCGGAATTGAAGTGCATGAAATGCCACACGACAT
JMFS091G07+           AGCCTGCCAAGAGATAGGATTTCAGTGCGGAATTGAAGTGCATGAAATGCCACACGACAT
                      ____________________________________________________________
consensus             AGCCTGCCAAGAGATAGGATTTCAGTGCGGAATTGAAGTGCATGAAATGCCACACGACAT
 
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rJMFF018O12-          CTAAGCCTTTGATACTCAGCCAAGCTAGGTGGAAGGATGGACTGCAGGCATCCTCCATCC
JMFS091G07+           CTAAGCCTTTGATACTCAGCCAAGCTAGGTGGAAGGATGGACTGCAGGCATCCTCCATCC
                      ____________________________________________________________
consensus             CTAAGCCTTTGATACTCAGCCAAGCTAGGTGGAAGGATGGACTGCAGGCATCCTCCATCC
 
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rJMFF018O12-          GACAAAATTAACCCAATGACATTTGCTTTCTTCAACTTTGGTAGAACTTCAGAAATATAA
JMFS091G07+           GACAAAATTAACCCAATGACATTTGCTTTCTTCAACTTTGGTAGAACTTCAGAAATATAA
                      ____________________________________________________________
consensus             GACAAAATTAACCCAATGACATTTGCTTTCTTCAACTTTGGTAGAACTTCAGAAATATAA
 
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rJMFF018O12-          AAGGTAGGAGAAGTTGTAATCCTGGGCTTAAAAGTTGCCAACTCTTTTCTTCTCCTTGCA
JMFS091G07+           AAGGTAGGAGAAGTTGTAATCCTGGGCTTAAAAGTTGCCAACTCTTTTCTTCTCCTTGCA
JMFF018O12+                                                                      A
                      ____________________________________________________________
consensus             AAGGTAGGAGAAGTTGTAATCCTGGGCTTAAAAGTTGCCAACTCTTTTCTTCTCCTTGCA
 
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rJMFF018O12-          TTCTTCAAGGTTGGTGGTAGCTCCTTCACTATGATCACATCATTTGCCAAGCTTGCTATG
JMFS091G07+           TTCTTCAAGGTTGGTGGTAGCTCCTTCACTATGATCACATCATTTGCCAAGCTTGCTATG
JMFF018O12+           TTCTTCAAGGTTGGTGGTAGCTCCTTCACTATGATCACATCATTTGCCAAGCTTGCTATG
                      ____________________________________________________________
consensus             TTCTTCAAGGTTGGTGGTAGCTCCTTCACTATGATCACATCATTTGCCAAGCTTGCTATG
 
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rJMFF018O12-          AACTTTTCCTCATCATAAAGATATGAAAAACTCCTAAATTTTGAACTGATGCCTTTCGAC
JMFS091G07+           AACTTTTCCTCATCATAAAGATATGAAAAACTCCTAAATTTTGAACTGATGCCTTTCGAC
JMFF018O12+           AACTTTTCCTCATCATAAAGATATGAAAAACTCCTAAATTTTGAACTGATGCCTTTCGAC
                      ____________________________________________________________
consensus             AACTTTTCCTCATCATAAAGATATGAAAAACTCCTAAATTTTGAACTGATGCCTTTCGAC
 
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rJMFF018O12-          TGGGTACTTTGTTGGACCTCTGGAATGACAAGGGTAGCATTTAGAAGTCTTGCAACAGTG
JMFS091G07+           TGGGTACTTTGTTGGACCTCTGGAATGACAAGGGTAGCATTTAGAAGTCTTGCAACAGTG
JMFF018O12+           TGGGTACTTTGTTGGACCTCTGGAATGACAAGGGTAGCATTTAGAAGTCTTGCAACAGTG
                      ____________________________________________________________
consensus             TGGGTACTTTGTTGGACCTCTGGAATGACAAGGGTAGCATTTAGAAGTCTTGCAACAGTG
 
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rJMFF018O12-          ACCAGGTCACAGATCGAGTTCCTAATCTTCTCGAAAGAACCAAAAATCTTGGCATAAATG
JMFS091G07+           ACCAGGTCACAGATCGAGTTCCTAATCTTCTCGAAAGAACCAAAAATCTTGGCATAAATG
JMFF018O12+           ACCAGGTCACAGATCGAGTTCCTAATCTTCTCGAAAGAACCAAAAATCTTGGCATAAATG
                      ____________________________________________________________
consensus             ACCAGGTCACAGATCGAGTTCCTAATCTTCTCGAAAGAACCAAAAATCTTGGCATAAATG
 
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rJMFF018O12-          AAGCCATTGTTCTCTACTGGAACTGGATATGTACTTCTTGGATCTGCNAAATGTTGCAGT
JMFS091G07+           AAGCCATTGTTCTCTACTGGAACTGGATATGTACTTCTTGGATCTGCAAAATGTTGCAGT
JMFF018O12+           AAGCCATTGTTCTCTACTGGAACTGGATATGTACTTCTTGGATCTGCAAAATGTTGCAGT
JMFF036K22+                                                 TGGATCTGCAAAATGTTGCAGT
                      ____________________________________________________________
consensus             AAGCCATTGTTCTCTACTGGAACTGGATATGTACTTCTTGGATCTGCAAAATGTTGCAGT
 
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rJMFF018O12-          GAATCCAAAGACTTGACATTTCCCCAC                                 
JMFS091G07+           GACTCCAAAGACTTGACATTTCCCCACAACCTCCGATATGCAGCACCCTTTTTAATTGGA
JMFF018O12+           GAATCCAAAGACTTGACATTTCCCCACAACCTCCGATATGCAGCACCCTTTTTAATTGGA
JMFF036K22+           GACTCCAAAGACTTGACATTTCCCCACAACCTCCGATATGCAGCACCCTTTTTAATTGGA
                      ____________________________________________________________
consensus             GAATCCAAAGACTTGACATTTCCCCACAACCTCCGATATGCAGCACCCTTTTTAATTGGA
 
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JMFS091G07+           AGATTAGGAGTTAGCTCA                                          
JMFF018O12+           AGATTAGGAGTTAGCTCATCCGTAAAAACAGTGAAAGCAGTGTACTGTACAAGATCAGCA
JMFF036K22+           AGATTAGGAGTTAGCTCATCCGTAAAAACAGTGAAAGCAGTGTACTGTACAAGATCAGCA
                      ____________________________________________________________
consensus             AGATTAGGAGTTAGCTCATCCGTAAAAACAGTGAAAGCAGTGTACTGTACAAGATCAGCA
 
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JMFF018O12+           CTAGATTTGGCTAAAAATAAATGAACCAGCAAGGAAACAAATGATAGCACCAGCC     
JMFF036K22+           CTAGATTTGGCTAAAAATAAATGAACCAGCAAGGAAACAAATGATAGCACCAGCCCACCT
                      ____________________________________________________________
consensus             CTAGATTTGGCTAAAAATAAATGAACCAGCAAGGAAACAAATGATAGCACCAGCCCACCT
 
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JMFF036K22+           AGTGCCGCCCATTTTATCTTTGATTTCATTGCACTTTAATCAAACTCGAATCTCATAAGC
                      ____________________________________________________________
consensus             AGTGCCGCCCATTTTATCTTTGATTTCATTGCACTTTAATCAAACTCGAATCTCATAAGC
 
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JMFF036K22+           GGTGAGGATTGATGCAAGGGATCGATATGGAAATGGGTGAGATCACAGAGCCTCCTCCGA
                      ____________________________________________________________
consensus             GGTGAGGATTGATGCAAGGGATCGATATGGAAATGGGTGAGATCACAGAGCCTCCTCCGA
 
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JMFF036K22+           AATATCCAATTCGAGAAAAGACGTTCTTTTAGATCCCAGATTGGTTCATGGTTTTCAATA
                      ____________________________________________________________
consensus             AATATCCAATTCGAGAAAAGACGTTCTTTTAGATCCCAGATTGGTTCATGGTTTTCAATA
 
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JMFF036K22+           AAGACTTGAGTGTCAGTGAGCAGAGCTGAAGCTTGAGAGCGACAGATTGCACGGCAATGG
                      ____________________________________________________________
consensus             AAGACTTGAGTGTCAGTGAGCAGAGCTGAAGCTTGAGAGCGACAGATTGCACGGCAATGG
 
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JMFF036K22+           ATCTGGGATTTCTTGAACGGCCTTGAACTGAGACTCAGAGAGAGAGAGAGATAGAGAGAG
                      ____________________________________________________________
consensus             ATCTGGGATTTCTTGAACGGCCTTGAACTGAGACTCAGAGAGAGAGAGAGATAGAGAGAG
 
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JMFF036K22+           AACGTTTATGAGGAGAGAATCGAGTGCGAAGCGTCACGGTTCAGTAACATGGGTGATGGG
                      ____________________________________________________________
consensus             AACGTTTATGAGGAGAGAATCGAGTGCGAAGCGTCACGGTTCAGTAACATGGGTGATGGG