Contig 000203:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF035P04-                                                       TAGGGAGAATCTGAT
                      ____________________________________________________________
consensus                                                          TAGGGAGAATCTGAT
 
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rJMFF035P04-          ACTAAAAGTGCAGTAGTGATGATGATCTATTACAGAGAAGCAGATGTACACATTTTACAC
                      ____________________________________________________________
consensus             ACTAAAAGTGCAGTAGTGATGATGATCTATTACAGAGAAGCAGATGTACACATTTTACAC
 
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rJMFF035P04-          AGATATAGTATGTCTATGTCATAGTGTAGCACTGTAGCTACCACAGTTCAACCACTGCTA
                      ____________________________________________________________
consensus             AGATATAGTATGTCTATGTCATAGTGTAGCACTGTAGCTACCACAGTTCAACCACTGCTA
 
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rJMFF035P04-          ACAATGTATTAGTAGAATGAAGGTGCCATTGTCCCGAGATTCAACCGAGATCAGGGACAG
                      ____________________________________________________________
consensus             ACAATGTATTAGTAGAATGAAGGTGCCATTGTCCCGAGATTCAACCGAGATCAGGGACAG
 
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rJMFF035P04-          TAAAGAACTCATCAAGAATACTAAATCTAAAGTCATTGATGGCCCTATTTTACTTATAGC
                      ____________________________________________________________
consensus             TAAAGAACTCATCAAGAATACTAAATCTAAAGTCATTGATGGCCCTATTTTACTTATAGC
 
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rJMFF035P04-          TGTTTATTGCTTCCTGAGCTTCGGTAAGAAATTTAGTTGCCTCCTCCTTTACCAAAGCCT
                      ____________________________________________________________
consensus             TGTTTATTGCTTCCTGAGCTTCGGTAAGAAATTTAGTTGCCTCCTCCTTTACCAAAGCCT
 
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rJMFF035P04-          CCACCGGCACCTCCTCCGGCGCCACCTCCTGCTCCACCACCAACGCCTCCTCCACCTTTT
                      ____________________________________________________________
consensus             CCACCGGCACCTCCTCCGGCGCCACCTCCTGCTCCACCACCAACGCCTCCTCCACCTTTT
 
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rJMFF035P04-          TTGTCACATCATCCAATTCTGAGCAATGAGTTACAAAGTTCTCCCGCATGTTGAACATCA
                      ____________________________________________________________
consensus             TTGTCACATCATCCAATTCTGAGCAATGAGTTACAAAGTTCTCCCGCATGTTGAACATCA
 
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rJMFF035P04-          GTCCCAAAACCTCATCCACATCAACAAGCTTTCTTCTATATTGTACCCCCAAATCCATAA
                      ____________________________________________________________
consensus             GTCCCAAAACCTCATCCACATCAACAAGCTTTCTTCTATATTGTACCCCCAAATCCATAA
 
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rJMFF035P04-          GCTCCTTTGTGCATTGGGTTCGGGGGGTTAGTGCCAAAGATGAGGAAAAGATTTTGGGTA
JMFF035P04+                          GGGTTCGGGGGGTTAGTGCCAAAGATGAGGAAAAGATTTTGGGTA
                      ____________________________________________________________
consensus             GCTCCTTTGTGCATTGGGTTCGGGGGGTTAGTGCCAAAGATGAGGAAAAGATTTTGGGTA
 
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rJMFF035P04-          AATTGGCCGAGTCAGACCCCTCGGAAACAAGTTCGGATAAACCCGCCAAGCTGCCAGACC
JMFF035P04+           AATTGGCCGAGTCAGACCCCTCGGAAACAAGTTCGGATAAACCCGCCAAGCTGCCAGACC
                      ____________________________________________________________
consensus             AATTGGCCGAGTCAGACCCCTCGGAAACAAGTTCGGATAAACCCGCCAAGCTGCCAGACC
 
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rJMFF035P04-          CATGGGAAACGATTTTGGATACAACCGAGTCAGACTCATCTATGAGAAAATTATCCTCCT
JMSF007C14+                                                                      T
JMFF035P04+           CATGGGAAACGATTTTGGATACAACCGAGTCAGACTCATCTATGAGAAAATTATCCTCCT
                      ____________________________________________________________
consensus             CATGGGAAACGATTTTGGATACAACCGAGTCAGACTCATCTATGAGAAAATTATCCTCCT
 
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rJMFF035P04-          CCAAAATTTTGTTGAGCACTTCATAGATTTCCTGAACCAATGCTTGGGCTTGTTTG    
JMSF007C14+           CCAAAATTTTGTTGAGCACTTCATAGATTTCCTGAACCAATGCTTGGGCTTGTTTGAAGA
JMFF035P04+           CCAAAATTTTGTTGAGCACTTCATAGATTTCCTGAACCAATGCTTGGGCTTGTTTGAAGA
                      ____________________________________________________________
consensus             CCAAAATTTTGTTGAGCACTTCATAGATTTCCTGAACCAATGCTTGGGCTTGTTTGAAGA
 
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JMSF007C14+           GGTTGACAGCCACAGACAATCTAATGCCTTTAGTCTTTACTTCATCAAACAACTCTTTCT
JMFF035P04+           GGTTGACAGCCACAGACAATCTAATGCCTTTAGTCTTTACTTCATCAAACAACTCTTTCT
                      ____________________________________________________________
consensus             GGTTGACAGCCACAGACAATCTAATGCCTTTAGTCTTTACTTCATCAAACAACTCTTTCT
 
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JMSF007C14+           TCCGAGCTAATATGCGGTCGAACTCAGGCTGCAAGTCTTCGACGTTCTTATTCACAAGGT
JMFF035P04+           TCCGAGCTAATATGCGGTCGAACTCAGGCTGCAAGTCTTCGACGTTCTTATTCACAAAGT
                      ____________________________________________________________
consensus             TCCGAGCTAATATGCGGTCGAACTCAGGCTGCAAGTCTTCGACGTTCTTATTCACAAGGT
 
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JMSF007C14+           CCTTAAACCTGCGCGCTTCCTTTTGTGCTGAATCCATTGTCTG                 
JMFF035P04+           CCTTAAACCTGCGCGCTTCCTTTTGTGCTGAATCCATTGTCTGGCAGCGGAGTCGTCGGG
                      ____________________________________________________________
consensus             CCTTAAACCTGCGCGCTTCCTTTTGTGCTGAATCCATTGTCTGGCAGCGGAGTCGTCGGG
 
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JMFF035P04+           TGGTGGCGCTAGTGGTGGCATCGGAACTCAGGGAACTCACGGAGGATGAGAGCAGACGGA
                      ____________________________________________________________
consensus             TGGTGGCGCTAGTGGTGGCATCGGAACTCAGGGAACTCACGGAGGATGAGAGCAGACGGA
 
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JMFF035P04+           ACTCACGGAGGCTGAGAGCAGACGGAACTCACGGAAGAGAAGAGGAGAGACGGTCAGACG
                      ____________________________________________________________
consensus             ACTCACGGAGGCTGAGAGCAGACGGAACTCACGGAAGAGAAGAGGAGAGACGGTCAGACG
 
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JMFF035P04+           GAACTCGGAAGACTGGAAGAGAAGAGGAGACTGCTAATCGTATGAATGTGTACTTTTTTT
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consensus             GAACTCGGAAGACTGGAAGAGAAGAGGAGACTGCTAATCGTATGAATGTGTACTTTTTTT