Contig 000198:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030F18Sequence518000198 (6)ref|XP_006363650.1|1e-32PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S655001166 (6)ref|XP_004134584.1|1e-106PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Cucumi
JMFF033C18Sequence514000198 (6)ref|XP_006363650.1|6e-31PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S721001166 (6)gb|ACJ83525.1|2e-123unknown [Medicago truncatula]
JMFF035D23Sequence518000198 (6)ref|XP_006363650.1|1e-32PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S653001166 (6)ref|XP_004134584.1|6e-106PREDICTED: ferredoxin--NADP reductase, root isozyme, chloroplastic-like [Cucumi
JMFF037K05Sequence599000198 (6)ref|XP_006344529.1|5e-95PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S764001166 (6)gb|EYU19120.1|8e-137hypothetical protein MIMGU_mgv1a008446mg [Erythranthe guttata]
JMFF038J22Sequence583000198 (6)ref|XP_006344529.1|1e-53PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S750001166 (6)gb|EYU19120.1|1e-129hypothetical protein MIMGU_mgv1a008446mg [Erythranthe guttata]
JMFF051E04Sequence585000198 (6)ref|XP_006363650.1|3e-49PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic-like [S574001166 (6)ref|XP_004231567.1|1e-71PREDICTED: ferredoxin--NADP reductase, root-type isozyme, chloroplastic [Solanu

Alignment

This contig is upended


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JMFF037K05+                                    CTCGGGATCATAATAAACAGCGCGTCTAACACACA
                      ____________________________________________________________
consensus                                      CTCGGGATCATAATAAACAGCGCGTCTAACACACA
 
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JMFF037K05+           AACTGGTNGTCTTCCCATCAAAAGAGTCTCCATATCTGGAGGATGCGATTGAGTATAAAC
                      ____________________________________________________________
consensus             AACTGGTNGTCTTCCCATCAAAAGAGTCTCCATATCTGGAGGATGCGATTGAGTATAAAC
 
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JMFF037K05+           GAACATTATGGGGGCTACCTGGTTTCTTTGGGTTTTCTCCAGGAGGAATTACACCGTAGC
                      ____________________________________________________________
consensus             GAACATTATGGGGGCTACCTGGTTTCTTTGGGTTTTCTCCAGGAGGAATTACACCGTAGC
 
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JMFF037K05+           TTTGTCCTTCCCAGTACGGAACATTACCACCATGATCAATCACAATATGGCAGGTCTCAC
JMFF038J22+              GTCCTTCCCAGTACGGAACATTACCACCATGATCAATCACAATATGGCAGGTCTCAC
JMFF051E04+                          ACGGAACATTACCACCATGATCAATCACAATATGGCAGGTCTCAC
                      ____________________________________________________________
consensus             TTTGTCCTTCCCAGTACGGAACATTACCACCATGATCAATCACAATATGGCAGGTCTCAC
 
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JMFF037K05+           CAGGAGCTTTTGGGCCTACAATCCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
JMFF038J22+           CAGGAGCTTTTGGGCCTACAATCCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
JMFF051E04+           CAGGAGCTTTTGGGCCTACAATCCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
JMFF030F18+                                 CCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
JMFF033C18+                                     TCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
JMFF035D23+                                 CCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
                      ____________________________________________________________
consensus             CAGGAGCTTTTGGGCCTACAATCCTCTCAACAGAGGCAATGGTTGCTGTGTATGGCCCCT
 
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JMFF037K05+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
JMFF038J22+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
JMFF051E04+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
JMFF030F18+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
JMFF033C18+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
JMFF035D23+           TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
                      ____________________________________________________________
consensus             TAGGCTTGTACAAGTTCAGTGGAGGTTCTTTTGCATCTTCAAGTGATAAAGGTGAAACAG
 
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JMFF037K05+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
JMFF038J22+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
JMFF051E04+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
JMFF030F18+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
JMFF033C18+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
JMFF035D23+           TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
                      ____________________________________________________________
consensus             TAACTTTGGGTATGTTAGCTTGTTGCACTGACATGCAAACAACATATTGGCTCCGGGATT
 
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JMFF037K05+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
JMFF038J22+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
JMFF051E04+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
JMFF030F18+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
JMFF033C18+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
JMFF035D23+           TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
                      ____________________________________________________________
consensus             TTCCATTTCTGGTTTTCAAGTCAAAAGGTTGGAAAGATATTGGCGATCTGTTGTTGAACG
 
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JMFF037K05+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
JMFF038J22+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
JMFF051E04+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
JMFF030F18+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
JMFF033C18+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
JMFF035D23+           TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
                      ____________________________________________________________
consensus             TAATGCTGTTAGCCTTGAAGGCGGATCTTTGTAGGGACGAATCTCCATTGAGAGCAACAG
 
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JMFF037K05+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
JMFF038J22+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
JMFF051E04+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
JMFF030F18+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
JMFF033C18+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
JMFF035D23+           CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
                      ____________________________________________________________
consensus             CAACTGAGACCTGCATAAGCTGAGAGACGGCTGCCATGATCGCACTCCACAAAGCTCTTG
 
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JMFF037K05+           TATCTCGCTATAGAATTAAAACTT                                    
JMFF038J22+           TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
JMFF051E04+           TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
JMFF030F18+           TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
JMFF033C18+           TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
JMFF035D23+           TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
                      ____________________________________________________________
consensus             TATCTCGCTATAGAATTAAAACTTAAAAGTCAACAATGGGGTGTAGGGAGATTTATGAAG
 
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JMFF038J22+           GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
JMFF051E04+           GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
JMFF030F18+           GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
JMFF033C18+           GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
JMFF035D23+           GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
                      ____________________________________________________________
consensus             GGGAAGTTTGGGGTTTTGGGTAGGAATATGGTAAGGCGTTTGATCCTTTGAGCAGTTCCA
 
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JMFF038J22+           AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTC              
JMFF051E04+           AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTCCTTTCTTTTCTATT
JMFF030F18+           AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTCCTTTCTTTTCTATT
JMFF033C18+           AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTCCTTTCTTTTCTATT
JMFF035D23+           AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTCCTTTCTTTTCTATT
                      ____________________________________________________________
consensus             AAGGGCATCTACGCACCCCATTTGGCTCTTCATAGCTTTTCTTCTCCTTTCTTTTCTATT