Contig 000180:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF001M23Sequence575000180 (2)ref|XP_009764594.1|3e-89PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X3 [Nicotiana sylve750011102 (2)ref|XP_006363899.1|2e-64PREDICTED: histone-lysine N-methyltransferase ASHR1-like isoform X2 [Solanum tu
JMFF031P07Sequence543000180 (2)ref|XP_009764594.1|7e-81PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X3 [Nicotiana sylve627011102 (2)ref|XP_008361556.1|3e-55PREDICTED: histone-lysine N-methyltransferase ASHR1-like, partial [Malus domest

Alignment

This contig is upended


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JMFF001M23+                                    ATTGGAGGATCAAATTTACAAGGTTTGCCATCTGA
JMFF031P07+                                                                    TGA
                      ____________________________________________________________
consensus                                      ATTGGAGGATCAAATTTACAAGGTTTGCCATCTGA
 
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JMFF001M23+           GCGTACAACACTAGTTGCTTCTCATCAATGTCAGACATGTGAGACACCAAAAGCTCCACC
JMFF031P07+           GCGTACAACACTAGTTGCTTCTCATCAATGTCAGACATGTGAGACACCAAAAGCTCCACC
                      ____________________________________________________________
consensus             GCGTACAACACTAGTTGCTTCTCATCAATGTCAGACATGTGAGACACCAAAAGCTCCACC
 
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JMFF001M23+           AAAGCATAGTTGTCCATGGCAGTAGTTGGGATATTATTTTCACTTTGCAGTTTTCTCCTC
JMFF031P07+           AAAGCATAGTTGTCCATGGCAGTAGTTGGGATATTATTTTCACTTTGCAGTTTTCTCCTC
                      ____________________________________________________________
consensus             AAAGCATAGTTGTCCATGGCAGTAGTTGGGATATTATTTTCACTTTGCAGTTTTCTCCTC
 
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JMFF001M23+           AGATAAAGTTTAACCATCAATCTGATAGTTGGTGCAAGGGATTTTATCCTATCCCTCTCA
JMFF031P07+           AGATAAAGTTTAACCATCAATCTGATAGTTGGTGCAAGGGATTTTATCCTATCCCTCTCA
                      ____________________________________________________________
consensus             AGATAAAGTTTAACCATCAATCTGATAGTTGGTGCAAGGGATTTTATCCTATCCCTCTCA
 
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JMFF001M23+           ACTTTGAATAGTGATTGGCATTCAAATCTATGCAACTTCCAATCTGACTTTTGACATGTG
JMFF031P07+           ACTTTGAATAGTGATTGGCATTCAAATCTATGCAACTTCCAATCTGACTTTTGACATGTG
                      ____________________________________________________________
consensus             ACTTTGAATAGTGATTGGCATTCAAATCTATGCAACTTCCAATCTGACTTTTGACATGTG
 
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JMFF001M23+           GCACCACAGTAATAGACAACTTGACAAGCAGAACACTTCTTAACATTAGTGGATGTAAAG
JMFF031P07+           GCACCACAGTAATAGACAACTTGACAAGCAGAACACTTCTTAACATTAGTGGATGTAAAG
                      ____________________________________________________________
consensus             GCACCACAGTAATAGACAACTTGACAAGCAGAACACTTCTTAACATTAGTGGATGTAAAG
 
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JMFF001M23+           CACCATTCACATTTTGCTGATGGTCCAGTCTTGGTTTTGGTGGGAACAGAAACATAGGGC
JMFF031P07+           CACCATTCACATTTTGCTGATGGTCCAGTCTTGGTTTTGGTGGGAACAGAAACATAGGGC
                      ____________________________________________________________
consensus             CACCATTCACATTTTGCTGATGGTCCAGTCTTGGTTTTGGTGGGAACAGAAACATAGGGC
 
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JMFF001M23+           TCTTGGCTTATGATTACTTCCCCTGGGGAAAAATCTCGGGTAGTGAAAATGCAGCGACCC
JMFF031P07+           TCTTGGCTTATGATTACTTCCCCTGGGGAAAAATCTCGGGTAGTGAAAATGCAGCGACCC
                      ____________________________________________________________
consensus             TCTTGGCTTATGATTACTTCCCCTGGGGAAAAATCTCGGGTAGTGAAAATGCAGCGACCC
 
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JMFF001M23+           TTTTGTGGATGAGTTGAGACGGTTACGCCTTTTTCACTCAACGCTTCCTGTAATTCCTCC
JMFF031P07+           TTTTGTGGATGAGTTGAGACGGTTACGCCTTTTTCACTCAACGCTTCCTGTAATTCCTCC
                      ____________________________________________________________
consensus             TTTTGTGGATGAGTTGAGACGGTTACGCCTTTTTCACTCAACGCTTCCTGTAATTCCTCC
 
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JMFF001M23+           ATGTATGCTCAAAGCTTGCGCAATAGTGAACTTGAGACTTCCAAATGATTCTGGGAACTT
JMFF031P07+           ATGTATGCTCAAAGCTTGCGCAATAGTGAACTTGAGACTTCCAAATGATTCTGGGAACTT
                      ____________________________________________________________
consensus             ATGTATGCTCAAAGCTTGCGCAATAGTGAACTTGAGACTTCCAAATGATTCTGGGAACTT