Contig 000172:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF030G20-                                        TGCATAATTTAACTCGTATTTTGGATGATG
                      ____________________________________________________________
consensus                                           TGCATAATTTAACTCGTATTTTGGATGATG
 
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rJMFF030G20-          CATGTCTAATTCAAATCAACCGTCTGATCAATTCGGTTACAGTTGCCCCACTTTTCATTC
                      ____________________________________________________________
consensus             CATGTCTAATTCAAATCAACCGTCTGATCAATTCGGTTACAGTTGCCCCACTTTTCATTC
 
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rJMFF030G20-          ATTACTGATTGAACTTAAGACCTCTAATAATTTCTCATGTAAGATGTTTCAATTATGAAA
                      ____________________________________________________________
consensus             ATTACTGATTGAACTTAAGACCTCTAATAATTTCTCATGTAAGATGTTTCAATTATGAAA
 
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rJMFF030G20-          TTCAATCATCTGCCAATAGAAATACTAATAATCCATTTGTGTACAACAATTGTAATGAAT
JMFN011I17+                                       TAATCCATTTGTGTACAACAATTGTAATGAAT
                      ____________________________________________________________
consensus             TTCAATCATCTGCCAATAGAAATACTAATAATCCATTTGTGTACAACAATTGTAATGAAT
 
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rJMFF030G20-          AGGAGAGAACCAATTAACAAAGTAAGTGACGAAAAAGGTGGGAGACAATTGAACCAATGT
JMFN011I17+           AGGAGAGAACCCATTAACAAAGTAAGTGACGAAAAAGGTGGGAGACAATTGAACCAATGT
                      ____________________________________________________________
consensus             AGGAGAGAACCCATTAACAAAGTAAGTGACGAAAAAGGTGGGAGACAATTGAACCAATGT
 
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rJMFF030G20-          GAACTCCACAATAGCAGATAACTACTTACTCCAAGAAGCCTATAAGAAGAGAAGGGTATA
JMFN011I17+           GAACTCCACAATAGCAGATAACTACTTACTCCAAGAAGCCTATAAGAAGAGAAGGGTATA
                      ____________________________________________________________
consensus             GAACTCCACAATAGCAGATAACTACTTACTCCAAGAAGCCTATAAGAAGAGAAGGGTATA
 
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rJMFF030G20-          TCCACCCACAATGGCGAAAACCAAATGGTTGAGAAGACCCGAGGTCGTTATCTTGTGAGA
JMFN011I17+           TCCACCCACAATGGCGAAAACCAAATGGTTGAGAAGACCCGAGGTCGTTATCTTGTGAGA
                      ____________________________________________________________
consensus             TCCACCCACAATGGCGAAAACCAAATGGTTGAGAAGACCCGAGGTCGTTATCTTGTGAGA
 
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rJMFF030G20-          AGAGGATGGAGGCGATGAAGTTGGAGATGCAGACGAGTCGCCACTGGCGCCTTTGTCCCC
JMFN011I17+           AGAGGATGGAGGCGATGAAGTTGGAGATGCAGACGAGTCGCCACTGGCGCCTTTGTCCCC
                      ____________________________________________________________
consensus             AGAGGATGGAGGCGATGAAGTTGGAGATGCAGACGAGTCGCCACTGGCGCCTTTGTCCCC
 
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rJMFF030G20-          AGCCGGGGCATCTGCAACGGGGGCGATATCGGGTGCGGGTGCAGGGGCGGGGGTGGGGGG
JMFN011I17+           AGCCGGGGCATCTGCAACGGGGGCGATATCGGGTGCGGGTGCAGGGGCGGGGGTG--GGG
                      ____________________________________________________________
consensus             AGCCGGGGCATCTGCAACGGGGGCGATATCGGGTGCGGGTGCAGGGGCGGGGGTGGGGGG
 
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rJMFF030G20-          GGAATGTCAGTCCCGAAGATGGCTTCGGGGAGGAGAACCCCGTCTACCTGATAAACAGCA
JMFN011I17+           GGAATGTCAGTCCCGAAGATGGCTTCGGGGAGGAGAACCCCGTCTACCTGATAAACAGCA
                      ____________________________________________________________
consensus             GGAATGTCAGTCCCGAAGATGGCTTCGGGGAGGAGAACCCCGTCTACCTGATAAACAGCA
 
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rJMFF030G20-          ACGGGGAAAGTTGCCCGCACTGCACTGCTGATTTTGGTGCTAGTCCACCCCGAGTTTAGG
JMFN011I17+           ACGGGGAAAGTTGCCCGCACTGCACTGCTGATTTTGGTGCTAGTCCACCCCGAGTTTAGG
                      ____________________________________________________________
consensus             ACGGGGAAAGTTGCCCGCACTGCACTGCTGATTTTGGTGCTAGTCCACCCCGAGTTTAGG
 
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rJMFF030G20-          TGCACAGTCCCGGAGACGTCTGTGAAGTTCAAACCGTAAAGTTGCCCACCAGCAAAGGTA
JMFN011I17+           TGCACAGTCCCGGAGACGTCTGTGAAGTTCAAACCGTAAAGTTGCCCACCAGCAAAGGTA
                      ____________________________________________________________
consensus             TGCACAGTCCCGGAGACGTCTGTGAAGTTCAAACCGTAAAGTTGCCCACCAGCAAAGGTA
 
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rJMFF030G20-          GTTATAGGGCTGAATTGGCTGAGGTTCCTGAACTC                         
JMFN011I17+           GTTATAGGGCTGAATTGGCTGAGGTTCCTGAACTCCGCGAGGGTGTAGTAATGTGGCAGC
JMFF030G20+                                                     GTGTAGTAATGTGGCAGC
                      ____________________________________________________________
consensus             GTTATAGGGCTGAATTGGCTGAGGTTCCTGAACTCCGCGAGGGTGTAGTAATGTGGCAGC
 
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JMFN011I17+           GCGTGGAAAAGGCAGAGCGACTTGAGCTGGTTAGCAGTGAGGTTGGAGAGCGA       
JMFF030G20+           GCGTGGAAAAGGCAGAGCGACTTGAGCTGGTTAGCAGTGAGGTTGGAGAGCGAGACCTTC
                      ____________________________________________________________
consensus             GCGTGGAAAAGGCAGAGCGACTTGAGCTGGTTAGCAGTGAGGTTGGAGAGCGAGACCTTC
 
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JMFF030G20+           TTCAGCTTCGAGAACGCTTGGTCTTTGGGCACAAAGAGCGTGATCCCTTCCTCCGTATCG
                      ____________________________________________________________
consensus             TTCAGCTTCGAGAACGCTTGGTCTTTGGGCACAAAGAGCGTGATCCCTTCCTCCGTATCG
 
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JMFF030G20+           TTGGCTTGGTTTTGGAAAGTTTCTATGACTTTGGTGGATTCGAGGTAGTTAAGGAAGGTG
                      ____________________________________________________________
consensus             TTGGCTTGGTTTTGGAAAGTTTCTATGACTTTGGTGGATTCGAGGTAGTTAAGGAAGGTG
 
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JMFF030G20+           TGGAATGGGCCAGCAACTGTGAGTAAGTCTGCGAGGTTCACACGTTCTGGGGCGGGTGCA
                      ____________________________________________________________
consensus             TGGAATGGGCCAGCAACTGTGAGTAAGTCTGCGAGGTTCACACGTTCTGGGGCGGGTGCA
 
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JMFF030G20+           GGTGCAGGTGCTGGAGGTAGGCTCGGTGGTTTGGCAATGCCCTTTGCATTAACAACGACC
                      ____________________________________________________________
consensus             GGTGCAGGTGCTGGAGGTAGGCTCGGTGGTTTGGCAATGCCCTTTGCATTAACAACGACC
 
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JMFF030G20+           CCGGCTGAAGAATAACATATCAGCAGACTAACCAGCATCAACACAGCCCTGCCACAATCC
                      ____________________________________________________________
consensus             CCGGCTGAAGAATAACATATCAGCAGACTAACCAGCATCAACACAGCCCTGCCACAATCC
 
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JMFF030G20+           ATCTGGAGAGACCCAAGGAGAGTATGTAGCAGAGAAGAGAGAGAAGTTTGATTTGGAGAT
                      ____________________________________________________________
consensus             ATCTGGAGAGACCCAAGGAGAGTATGTAGCAGAGAAGAGAGAGAAGTTTGATTTGGAGAT