Contig 000169:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014N12Sequence486000169 (6)744000169 (6)ref|XP_006354454.1|3e-34PREDICTED: probable disease resistance RPP8-like protein 4-like [Solanum tubero
JMFF022C06Sequence482000169 (6)
JMFF030A04Sequence571000169 (6)721000169 (6)ref|XP_006354454.1|1e-34PREDICTED: probable disease resistance RPP8-like protein 4-like [Solanum tubero
JMFS136B09Sequence595000169 (6)ref|XP_006354454.1|1e-12PREDICTED: probable disease resistance RPP8-like protein 4-like [Solanum tubero

Alignment

This contig is upended


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rJMFF014N12-                                            ACTGGTGATTTCACCAAATGCTCCAC
                      ____________________________________________________________
consensus                                               ACTGGTGATTTCACCAAATGCTCCAC
 
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rJMFF014N12-          ACACTTACTCGCCATATAATTTATTATTCAACATCTGCTCACTCCAGAACCTTGAAACAA
                      ____________________________________________________________
consensus             ACACTTACTCGCCATATAATTTATTATTCAACATCTGCTCACTCCAGAACCTTGAAACAA
 
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rJMFF014N12-          TCAAGGTCAACAACACAACAGTTATTCAAACCATTTGGAAACCCAACACACAACTCTAAT
rJMFF030A04-                          AACAGTTATTCAAACCATTTGGAAACCCAACACACAACTCTAAT
                      ____________________________________________________________
consensus             TCAAGGTCAACAACACAACAGTTATTCAAACCATTTGGAAACCCAACACACAACTCTAAT
 
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rJMFF014N12-          GATTTCCAATGGACAAAGCTAGACAACATTATTGCAGGAGAGACGATGCACTTATATAGA
rJMFF030A04-          GATTTCCAATGGACAAAGCTAGACAACATTATTGCAGGAGAGACGATGCACTTATATAGA
                      ____________________________________________________________
consensus             GATTTCCAATGGACAAAGCTAGACAACATTATTGCAGGAGAGACGATGCACTTATATAGA
 
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rJMFF014N12-          TGTGACATAAACACCAATAGCATCAACATAGTCGCCGGCACGGCCATGGAATCCAACAAT
rJMFF030A04-          TGTGACATAAACACCAATAGCATCAACATAGTCGCCGGCACGGCCATGGAATCCAACAAT
                      ____________________________________________________________
consensus             TGTGACATAAACACCAATAGCATCAACATAGTCGCCGGCACGGCCATGGAATCCAACAAT
 
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rJMFF014N12-          CTTGCCGTCCTGCACCGCAAACGAGAACGGCGTCCCGTCGTTAGTCCCATGTGGTCCACG
rJMFF030A04-          CTTGCCGTCCTGCACCGCAAACGAGAACGGCGTCCCGTCGTTAGTCCCATGTGGTCCACG
                      ____________________________________________________________
consensus             CTTGCCGTCCTGCACCGCAAACGAGAACGGCGTCCCGTCGTTAGTCCCATGTGGTCCACG
 
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rJMFF014N12-          TGTAGTCACATTGGTCTCGAACTTGATCGACCTTAAAACCGTCAGGCCATGGTAATTCCC
rJMFF030A04-          TGTAGTCACATTGGTCTCGAACTTGATCGACCTTAAAACCGTCAGGCCATGGTAATTCCC
                      ____________________________________________________________
consensus             TGTAGTCACATTGGTCTCGAACTTGATCGACCTTAAAACCGTCAGGCCATGGTAATTCCC
 
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rJMFF014N12-          ATATGTTCCACTCACACCCCTCAAGTACTCTGATGGACCGTTGATATTCACCTGGATGGT
rJMFF030A04-          ATATGTTCCACTCACACCCCTCAAGTACTCTGATGGACCGTTGATATTCACCTGGATGGT
                      ____________________________________________________________
consensus             ATATGTTCCACTCACACCCCTCAAGTACTCTGATGGACCGTTGATATTCACCTGGATGGT
 
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rJMFF014N12-          TTTACTGCCACCGGGGCCTCCTAATTTGATCGGAGCCTCCACCCGGCCGTCGGCGCTCAC
rJMFF030A04-          TTTACTGCCACCGGGGCCTCCTAATTTGATCGGAGCCTCCACCCGGCCGTCGGCGCTCAC
JMFS136B09+                                 AATTTGATCGGAGCCTCCACCCGGCCGTCGGCGCTCAC
                      ____________________________________________________________
consensus             TTTACTGCCACCGGGGCCTCCTAATTTGATCGGAGCCTCCACCCGGCCGTCGGCGCTCAC
 
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rJMFF014N12-          GCCGGTGAAAGTTATGGAGTCGATGACCGTACCATGAATAATAGTTATCTGTTTGATGAG
rJMFF030A04-          GCCGGTGAAAGTTATGGAGTCGATGACCGTACCATGAATAATAGTTATCTGTTTGATGAG
JMFS136B09+           GCCGGTGAAAGTTATGGAGTCGATGACCGTACCATGAATAATAGTTATCTGTTTGATGAG
JMFF030A04+                                      CGTACCATGAATAATAGTTATCTGTTTGATGAG
                      ____________________________________________________________
consensus             GCCGGTGAAAGTTATGGAGTCGATGACCGTACCATGAATAATAGTTATCTGTTTGATGAG
 
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rJMFF014N12-          CCCTTTAGGCTTGAAATCCCATTTACTTCCACCGGGACCTCCCCAAGCTCCAACCAGTAT
rJMFF030A04-          CCCTTTAGGCTTGAAATCCCATTTACTTCCACCGGGACCTCCCCAAGCTCCAACCAGTAT
JMFS136B09+           CCCTTTAGGCTTGAAATCCCATTTACTTCCACCGGGACCTCCCCAAGCTCCAACCAGTAT
JMFF014N12+                                                               ACCAGTAT
JMFF022C06+                                                            CCAACCAGTAT
JMFF030A04+           CCCTTTAGGCTTGAAATCCCATTTACTTCCACCGGGACCTCCCCAAGCTCCAACCAGTAT
                      ____________________________________________________________
consensus             CCCTTTAGGCTTGAAATCCCATTTACTTCCACCGGGACCTCCCCAAGCTCCAACCAGTAT
 
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rJMFF014N12-          TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGGCCCGGGGTGGTGTTTGCAGAAT
rJMFF030A04-          TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTTTGCAGAAT
JMFS136B09+           TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTTTGCAGAAT
JMFF014N12+           TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTTTGCAGAAT
JMFF022C06+           TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTCTGCAGAAT
JMFF030A04+           TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTTTGCAGAAT
                      ____________________________________________________________
consensus             TTCTTTAGGAATTTGAATTCCAGATCCAAAATCTGGGG-CCGGGGTGGTGTTTGCAGAAT
 
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rJMFF014N12-          CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAA  
rJMFF030A04-          CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGANGCTGGCGAAAC
JMFS136B09+           CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAAAC
JMFF014N12+           CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAAAC
JMFF022C06+           CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAAAC
JMFF030A04+           CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAAAC
                      ____________________________________________________________
consensus             CCGATGAGGGAGCTTGACAAGTGAGGAAAGGTTGGATTTTTGCCCGGAGGCTGGCGAAAC
 
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rJMFF030A04-          GGGCGTTGAAGGTTGGCGAAGTCCCTGGACTTGTTA                        
JMFS136B09+           GGGCGTTG-AGGTTGGCGAAGTCCCTGGACTTGTTAGAGTGGCCGCCGCCGCCGCCGTAG
JMFF014N12+           GGGCGTTG-AGGTTGGCGAAGTCCCTGGACTTGTTAGAGTGGCCGCCGCCGCCGCCGTAG
JMFF022C06+           GGGCGTTG-AGGTTGGCGAAGTCCCTGGACTTGTTAGAGTGGCCGCCGCCGCCGCCGTAG
JMFF030A04+           GGGCGTTG-AGGTTGGCGAAGTCCCTGGACTTGTTAGAGTGGCCGCCGCCGCCGCCGTAG
                      ____________________________________________________________
consensus             GGGCGTTG-AGGTTGGCGAAGTCCCTGGACTTGTTAGAGTGGCCGCCGCCGCCGCCGTAG
 
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JMFS136B09+           TTTAGTTCTTGAGCGCACACGGCGAGGCGCTCGATGGCGGAGGACCAGATGTCGGTTCTC
JMFF014N12+           TTTAGTTCTTGAGCGCACACGGCGAGGCGCTCGATGGCGGAGGACCAGATGTCGGTTCTC
JMFF022C06+           TTTAGTTCTTGAGCGCACACGGCGAGGCGCTCGATGGCGGAGGACCAGATGTCGGTTCTC
JMFF030A04+           TTTAGTTCTTGAGCGCACACGGCGAGGCGCTCGATGGCGGAGGACCAGATGTCGGTTCTC
                      ____________________________________________________________
consensus             TTTAGTTCTTGAGCGCACACGGCGAGGCGCTCGATGGCGGAGGACCAGATGTCGGTTCTC
 
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JMFS136B09+           ACCCGGCCTTGCGCCGTTTTCTCGCCGTCGACCAGGAAACACTGCATCCATGTTAGCTCA
JMFF014N12+           ACCCGGCCTTGCGCCGTTTTCTCGCCGTCGACCAGGAAACACTGCATCCATGTTAGCTCA
JMFF022C06+           ACCCGGCCTTGCGCCGTTTTCTCGCCGTCGACCAGGAAACACTGCATCCATGTTAGCTCA
JMFF030A04+           ACCCGGCCTTGCGCCGTTTTCTCGCCGTCGACCAGGAAACACTGCATCCATGTTAGCTCA
                      ____________________________________________________________
consensus             ACCCGGCCTTGCGCCGTTTTCTCGCCGTCGACCAGGAAACACTGCATCCATGTTAGCTCA
 
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JMFS136B09+           GTCACCAGCTCCTCGACGTGTTCGTCGGCTCCGCACTGAGTTTCGGAAAGGGCGTCGTTG
JMFF014N12+           GTCACCAGCTCCTCGACGTGTTCGTCGGCTCCGCACTGAGTTTCGGAAAGGGCGTCGTTG
JMFF022C06+           GTCACCAGCTCCTCGACGTGTTCGTCGGCTCCGCACTGAGTTTCGGAAAGGGCGTCGTTG
JMFF030A04+           GTCACCAGCTCCTCGACGTGTTCGTCGGCTCCGCACTGAGTTTCGGAAAGGGCGTCGTTG
                      ____________________________________________________________
consensus             GTCACCAGCTCCTCGACGTGTTCGTCGGCTCCGCACTGAGTTTCGGAAAGGGCGTCGTTG
 
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JMFS136B09+           AACTTCGACAGCGCCACGGAAACGGCGGGAATGGCCATTGTTTTTTGGTTGGTAATATAA
JMFF014N12+           AACTTCGACAGCGCCACGGAAACGGCGGGAATGGCCATTGTTTTTTGGTTGGTAATATAA
JMFF022C06+           AACTTCGACAGCGCCACGGAAACGGCGGGAATGGCCATTGTTTTTTGGTTGGTAATATAA
JMFF030A04+           AACTTCGACAGCGCCACGGAAACGGCGGGAATGGCCATTGTTTTTTGGTTGGTAATATAA
                      ____________________________________________________________
consensus             AACTTCGACAGCGCCACGGAAACGGCGGGAATGGCCATTGTTTTTTGGTTGGTAATATAA
 
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JMFS136B09+           GCAAAAGGGAAGAAGGAGA                                         
JMFF014N12+           GCAAAAGGGAAGAAGGAGAGATCAGAGTTGTGAAG                         
JMFF022C06+           GCAAAAGGGAAGAAGGAGAGATCAGAGTTGTGAAG                         
JMFF030A04+           GCAAAAGGGAAGAAGGAGAGATCAGAGTTGTGAAGAGGAGAATGATTTTGGTATGTAGAT
                      ____________________________________________________________
consensus             GCAAAAGGGAAGAAGGAGAGATCAGAGTTGTGAAGAGGAGAATGATTTTGGTATGTAGAT