| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF009P16 | Sequence | 537 | 000166 (5) | gb|KDO44657.1| | 6e-81 | hypothetical protein CISIN_1g0124231mg, partial [Citrus sinensis] | 581 | 011211 (5) | emb|CDP06636.1| | 2e-16 | unnamed protein product [Coffea canephora] |
| JMFF020I14 | Sequence | 575 | 000166 (5) | emb|CDP06636.1| | 1e-84 | unnamed protein product [Coffea canephora] | 613 | 011211 (5) | emb|CDP06636.1| | 1e-32 | unnamed protein product [Coffea canephora] |
| JMFF029H04 | Sequence | 516 | 000166 (5) | emb|CDP06636.1| | 4e-72 | unnamed protein product [Coffea canephora] | 652 | 011211 (5) | emb|CDP06636.1| | 4e-24 | unnamed protein product [Coffea canephora] |
| JMFF037F16 | Sequence | 540 | 000166 (5) | emb|CDP06636.1| | 2e-80 | unnamed protein product [Coffea canephora] | 702 | 011211 (5) | emb|CDP06636.1| | 6e-40 | unnamed protein product [Coffea canephora] |
| JMFF049D09 | Sequence | 647 | 000166 (5) | ref|NP_001275129.1| | 3e-87 | uncharacterized protein LOC102577536 [Solanum tuberosum] gb|ABA46771.1| unknown | 664 | 011211 (5) | emb|CDP06636.1| | 2e-10 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
JMFF049D09+ CGAATATTATTATGCTNATGATTCCCGTTATTAAACCCTCCATCGTCGTC
____________________________________________________________
consensus CGAATATTATTATGCTNATGATTCCCGTTATTAAACCCTCCATCGTCGTC
. : . : . : . : . : . :
JMFF049D09+ CCAACTGTCCCAACTCGAATTCCCACCAACGTTCCCATTCCTACCCCCACCACCGCTCAA
____________________________________________________________
consensus CCAACTGTCCCAACTCGAATTCCCACCAACGTTCCCATTCCTACCCCCACCACCGCTCAA
. : . : . : . : . : . :
JMFF049D09+ GGGCGGCTTACTACTGTTACTACCGGCGCCGCCCTTGAGCGTTTCCTTGACCACTGGTGG
JMFF037F16+ TGACCACTGGTGG
JMFF009P16+ TGACCACTGGTGG
JMFF020I14+ GGCGCCGCCCTTGAGCGTTTCCTTGACCACTGGTGG
____________________________________________________________
consensus GGGCGGCTTACTACTGTTACTACCGGCGCCGCCCTTGAGCGTTTCCTTGACCACTGGTGG
. : . : . : . : . : . :
JMFF049D09+ ATCTCGCCAGGGCTTCCCGTCGGCTAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
JMFF037F16+ ATCTCGCCAGGGCTTCCCGTCGGCTAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
JMFF009P16+ ATCTCGCCAGGGCTTCCCGTCGGCTAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
JMFF020I14+ ATCTCGCCAGGGCTTCCCGTCGGCTAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
JMFF029H04+ TAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
____________________________________________________________
consensus ATCTCGCCAGGGCTTCCCGTCGGCTAGGGCTTGGATCCTGTCCCGGTAAACCGATGCTGC
. : . : . : . : . : . :
JMFF049D09+ CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
JMFF037F16+ CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
JMFF009P16+ CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
JMFF020I14+ CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
JMFF029H04+ CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
____________________________________________________________
consensus CTTGGTGTTGTACTTGGTGACGATATCGGTCTCTTTCGGGACTCCGTACTGGGAGATGAA
. : . : . : . : . : . :
JMFF049D09+ GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
JMFF037F16+ GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
JMFF009P16+ GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
JMFF020I14+ GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
JMFF029H04+ GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
____________________________________________________________
consensus GGAATTGAAGTTGTCGTTTCCCCCAAGCTCCATTTTCCGGAGCTGGATCTCGGACCAGGA
. : . : . : . : . : . :
JMFF049D09+ GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
JMFF037F16+ GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
JMFF009P16+ GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
JMFF020I14+ GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
JMFF029H04+ GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
____________________________________________________________
consensus GTCCATAGTGACAGATCGGACGAAGGAGATGTGGACGCCGAGGCCGCGGTGCTTGCCGGA
. : . : . : . : . : . :
JMFF049D09+ GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
JMFF037F16+ GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
JMFF009P16+ GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
JMFF020I14+ GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
JMFF029H04+ GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
____________________________________________________________
consensus GCACTCCAAGCACATGAACACTCCGTAGGAGACGGAGGCCCATTGAGGGTTTTTCTGGGA
. : . : . : . : . : . :
JMFF049D09+ GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
JMFF037F16+ GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
JMFF009P16+ GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
JMFF020I14+ GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
JMFF029H04+ GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
____________________________________________________________
consensus GCAGTCGACGCAGATCTTGTTCCCCGGCTGCGATTGTAAATCTCGGAGACGCCGCGATGC
. : . : . : . : . : . :
JMFF049D09+ CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
JMFF037F16+ CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
JMFF009P16+ CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
JMFF020I14+ CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
JMFF029H04+ CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
____________________________________________________________
consensus CGCCATTCTCTTCGACCTAACAAAATTCGGATCGGATCCGATTCAATCCGGCCTCGCGTC
. : . : . : . : . : . :
JMFF049D09+ TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCAGAAAGGAACGAAGAAAATAT
JMFF037F16+ TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCAGAAAGGAACGAAGAAAATATGTG
JMFF009P16+ TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCAGAAAGGAACGAAGAAAATATGTG
JMFF020I14+ TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCCGAAAGGAACGAAGAAAATATGTG
JMFF029H04+ TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCAGAAAGGAACGAAGAAAATATGTG
____________________________________________________________
consensus TCGAAAATCGAATCAAAACAAAAGAAATTGAGATTCAGAAAGGAACGAAGAAAATATGTG
. : . : . : . : . : . :
JMFF037F16+ TTGATCAGATTGGGTTGAGTTGGGAAAAGAGAATGGCCGAC
JMFF009P16+ TTGATCAGATTGGGTTGAGTTGGGAAAAGAGAATGGCCGAC
JMFF020I14+ TTGATCAGATTGGGTTGAGTTGGGAAAAGAGAATGGCCGACACTGTCAAAATTGAC
JMFF029H04+ TTGATCAGATTGGGTTGAGTTGGGAAAAGAGAATGGCCGACACTGTCAAAATTGACAGCT
____________________________________________________________
consensus TTGATCAGATTGGGTTGAGTTGGGAAAAGAGAATGGCCGACACTGTCAAAATTGACAGCT