Contig 000158:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028D11Sequence448000158 (2)ref|XP_010264910.1|5e-20PREDICTED: protein PHR1-LIKE 1 isoform X1 [Nelumbo nucifera] ref|XP_010264911.1|620001403 (2)ref|XP_009781298.1|6e-41PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Nicotiana sylvestris]
JMSF030C21Sequence679000158 (2)ref|XP_009781298.1|4e-40PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Nicotiana sylvestris]681001403 (2)ref|XP_009781298.1|2e-43PREDICTED: protein PHR1-LIKE 1-like isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF030C21+                GCTGACCACTGTGTGTAGGGGTATTTATTGGGTAATCAAGAAAATCAGTTAATGA
                      ____________________________________________________________
consensus                  GCTGACCACTGTGTGTAGGGGTATTTATTGGGTAATCAAGAAAATCAGTTAATGA
 
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JMSF030C21+           ATCCGTAGACCATGGGCCAATATTTTGCTTAGAGTAATGACTCGATGCTGTGGATTGAAG
                      ____________________________________________________________
consensus             ATCCGTAGACCATGGGCCAATATTTTGCTTAGAGTAATGACTCGATGCTGTGGATTGAAG
 
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JMSF030C21+           AACTCCAGAATCAGGCAACAACATGGATGACTCGTTATTTGTTGACTGGGAAATAAAAGG
                      ____________________________________________________________
consensus             AACTCCAGAATCAGGCAACAACATGGATGACTCGTTATTTGTTGACTGGGAAATAAAAGG
 
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JMSF030C21+           AGGTTGTCTCGAATGGTTCTCTAGTGGTGAAGCAGATGAAAAATGAAGATCACTGGAAAA
                      ____________________________________________________________
consensus             AGGTTGTCTCGAATGGTTCTCTAGTGGTGAAGCAGATGAAAAATGAAGATCACTGGAAAA
 
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JMSF030C21+           TCCAGAAGATGAAGAAAACATAAGACCAGCAACCTCACTATTTGATGACAATGGAGCAAC
JMFF028D11+                                   ACCAGCAACCTCACTATTTGATGACAATGGAGCAAC
                      ____________________________________________________________
consensus             TCCAGAAGATGAAGAAAACATAAGACCAGCAACCTCACTATTTGATGACAATGGAGCAAC
 
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JMSF030C21+           AGCTGGAGGACATTGCATAGTTTCCCTTTCCAAGGAAATCTGCTGCGAGTCGGGCAACTT
JMFF028D11+           AGCTGGAGGACATTGCATAGTTTCCCTTTCCAAGGAAATCTGCTGCGAGTCGGGCAACTT
                      ____________________________________________________________
consensus             AGCTGGAGGACATTGCATAGTTTCCCTTTCCAAGGAAATCTGCTGCGAGTCGGGCAACTT
 
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JMSF030C21+           GGGATATTTCCCTTCGAGATTTGTAGGAAGGACTGGTAAAGAAGAAGAAAGAGCCCCAGA
JMFF028D11+           GGGATATTTCCCTTCGAGATTTGTAGGAAGGACTGGTAAAGAAGAAGAAAGAGCCCCAGA
                      ____________________________________________________________
consensus             GGGATATTTCCCTTCGAGATTTGTAGGAAGGACTGGTAAAGAAGAAGAAAGAGCCCCAGA
 
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JMSF030C21+           TGCACCAAAGTTATTTAGTTGCCTAGACCCCACTCTTTGGATGGATAAAGCTGGTCGTGC
JMFF028D11+           TGCACCAAAGTTATTTAGTTGCCTAGACCCCACTCTTTGGATGGATAAAGCTGGTCGTGC
                      ____________________________________________________________
consensus             TGCACCAAAGTTATTTAGTTGCCTAGACCCCACTCTTTGGATGGATAAAGCTGGTCGTGC
 
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JMSF030C21+           CTCCATTACTGCTTTTTCGTGTAGATAGTTAATTATCTGCCTGAATCAGTATCCTCTTAA
JMFF028D11+           CTCCATTACTGCTTTTTCGTGTAGATAGTTAATTATCTGCCTGAATCAGTATCCTCTTAA
                      ____________________________________________________________
consensus             CTCCATTACTGCTTTTTCGTGTAGATAGTTAATTATCTGCCTGAATCAGTATCCTCTTAA
 
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JMSF030C21+           CTTCAGTCAACTAAGATGAAGCTCAATACCTACACGGAACAACAACGTAGGACACACATG
JMFF028D11+           CTTCAGTCAACTAAGATGAAGCTCAATAC--------AACAACAACGTAGGACACACATG
                      ____________________________________________________________
consensus             CTTCAGTCAACTAAGATGAAGCTCAATACCTACACGGAACAACAACGTAGGACACACATG
 
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JMSF030C21+           TCGACTCAAATTGCACGTGCGGTGGTTCCGTCGCCGGCGCGGCCGAGAGAATTGAACGGT
JMFF028D11+           TCGACTCAAATTGCACGTGCGGTGGTTCCGTCGCCGGCGCGGCCGAGAGAATTGAACGGT
                      ____________________________________________________________
consensus             TCGACTCAAATTGCACGTGCGGTGGTTCCGTCGCCGGCGCGGCCGAGAGAATTGAACGGT
 
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JMSF030C21+           GCCGGTCGTCTCGCCCTCTTGTC                                     
JMFF028D11+           GCCGGTCGTCTCGCCCTCTTGTCGCCTGCTTTTATTTGGGTTTGGCTTCTAAATAATTCT
                      ____________________________________________________________
consensus             GCCGGTCGTCTCGCCCTCTTGTCGCCTGCTTTTATTTGGGTTTGGCTTCTAAATAATTCT