Contig 000154:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF024N12Sequence494000154 (3)ref|XP_007051037.1|3e-12Galacturonosyltransferase-like 7 isoform 1 [Theobroma cacao] ref|XP_007051038.1|
JMFF027P10Sequence552000154 (3)ref|XP_009115870.1|3e-18PREDICTED: probable galacturonosyltransferase-like 7 [Brassica rapa]457011082 (3)
JMFF031E16Sequence615000154 (3)ref|XP_006359884.1|6e-25PREDICTED: probable galacturonosyltransferase-like 7-like [Solanum tuberosum]480011082 (3)gb|KHN08661.1|4e-29Putative galacturonosyltransferase-like 7 [Glycine soja]

Alignment

This contig is upended


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JMFF031E16+                                                        GAACGAGAGACGGAT
                      ____________________________________________________________
consensus                                                          GAACGAGAGACGGAT
 
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JMFF031E16+           CACAAATGCCGGTTTTCCCCAATGCGGAACCGCATTCGCCGCCGCTCCGAAACAGAGGGG
JMFF027P10+                                                           GAAACAGAGGGG
                      ____________________________________________________________
consensus             CACAAATGCCGGTTTTCCCCAATGCGGAACCGCATTCGCCGCCGCTCCGAAACAGAGGGG
 
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JMFF031E16+           CTTTCCGAAAAGAAAACCTATCGAGAGCGCCGCTGGAATTATGGAATCGGAGATAGGAGT
JMFF024N12+                                                         TCGGAGATAGGAGT
JMFF027P10+           CTTTCCGAAAAGAAAACCTATCGAGAGCGCCGCTGGAATTATGGAATCGGAGATAGGAGT
                      ____________________________________________________________
consensus             CTTTCCGAAAAGAAAACCTATCGAGAGCGCCGCTGGAATTATGGAATCGGAGATAGGAGT
 
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JMFF031E16+           CGAAGTTAGACGATCTGATGGCTTCTGCCGGCGGGAAGGACTGCAGCGACGGCGAGAGCA
JMFF024N12+           CGAAGTTAGACGATCTGATGGCTTCTGCCGGCGGGAAGGACTGCAGCGACGGCGAGAGCA
JMFF027P10+           CGAAGTTAGACGATCTGATGGCTTCTGCCGGCGGGAAGGACTGCAGCGACGGCGAGAGCA
                      ____________________________________________________________
consensus             CGAAGTTAGACGATCTGATGGCTTCTGCCGGCGGGAAGGACTGCAGCGACGGCGAGAGCA
 
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JMFF031E16+           CAATTGTCACCACTACAGCAGAAACAAACCACGAGAATCTCATGATCCAGAGCATCGTTC
JMFF024N12+           CAATTGTCACCACTACAGCAGAAACAAACCACGAGAATCTCATGATCCAGAGCATCGTTC
JMFF027P10+           CAATTGTCACCACTACAGCAGAAACAAACCACGAGAATCTCATGATCCAGAGCATCGTTC
                      ____________________________________________________________
consensus             CAATTGTCACCACTACAGCAGAAACAAACCACGAGAATCTCATGATCCAGAGCATCGTTC
 
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JMFF031E16+           TAACAAGGAAACCCCCAGTTCTCCTCTTCCTCTTCTTGGATTTGAAATCGAAACGCCCCG
JMFF024N12+           TAACAAGGAAACCCCCAGTTCTCCTCTTCCTCTTCTTGGATTTGAAATCGAAACGCCCCG
JMFF027P10+           TAACAAGGAAACCCCCAGTTCTCCTCTTCCTCTTCTTGGATTTGAAATCGAAACGCCCCG
                      ____________________________________________________________
consensus             TAACAAGGAAACCCCCAGTTCTCCTCTTCCTCTTCTTGGATTTGAAATCGAAACGCCCCG
 
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JMFF031E16+           CTACGCTTGAAGAATAAACTGAAGTGAAGATTAAGGCTAGGGTTCCTTTAAGGTCCGCCA
JMFF024N12+           CTACGCTTGAAGAATAAACTGAAGTGAAGATTAAGGCTAGGGTTCCTTTAAGGTCCGCCA
JMFF027P10+           CTACGCTTGAAGAATAAACTGAAGTGAAGATTAAGGCTAGGGTTCCTTTAAGGTCCGCCA
                      ____________________________________________________________
consensus             CTACGCTTGAAGAATAAACTGAAGTGAAGATTAAGGCTAGGGTTCCTTTAAGGTCCGCCA
 
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JMFF031E16+           GAGTGTACAGAAAAGAAATACAAACTGCCAAGTGTAAATTAAATCAATGGTTGCAGGAAG
JMFF024N12+           GAGTGTACAGAAAAGAAATACAAACTGCCAAGTGTAAATTAAATCAATGGTTGCAGGAAG
JMFF027P10+           GAGTGTACAGAAAAGAAATACAAACTGCCAAGTGTAAATTAAATCAATGGTTGCAGGAAG
                      ____________________________________________________________
consensus             GAGTGTACAGAAAAGAAATACAAACTGCCAAGTGTAAATTAAATCAATGGTTGCAGGAAG
 
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JMFF031E16+           ATTGTATATATGCTTTCCTTTATCTTCTCCCCTTTTCTTCTTTCTCTACTCGAATGCCGT
JMFF024N12+           ATTGTATATATGCTTTCCTTTATCTTCTCCCCTTTTCTTCTTTCTCTACTCGAATGCCGT
JMFF027P10+           ATTGTATATATGCTTTCCTTTATCTTCTCCCCTTTTCTTCTTTCTCTACTCGAATGCCGT
                      ____________________________________________________________
consensus             ATTGTATATATGCTTTCCTTTATCTTCTCCCCTTTTCTTCTTTCTCTACTCGAATGCCGT
 
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JMFF031E16+           GGGAACGAAGCGAAGTTTGATAGAAAGGGAAGAATCCATTGAAGCGAGTAGGAAAAGCTG
JMFF024N12+           GGGAACGAAGCGAAGTTTGATAGAAAGGGAAGAATCCATTGAAGCGAGTAGGAAAAGCTG
JMFF027P10+           GGGAACGAAGCGAAGTTTGATAGAAAGGGAAGAATCCATTGAAGCGAGTAGGAAAAGCTG
                      ____________________________________________________________
consensus             GGGAACGAAGCGAAGTTTGATAGAAAGGGAAGAATCCATTGAAGCGAGTAGGAAAAGCTG
 
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JMFF031E16+           GCCGCGCTGCACTGCACCGCACCGCCGTGGTTGCAGTCGTCTCTGTCTTCTCTCTC    
JMFF024N12+           GCCGCGCTGCACTGCACCGCACCGCCGTGGTTGCAGTCGTCTCTGTCTTCTCTCTC    
JMFF027P10+           GCCGCGCTGCACAGCACCGCACCGCCGTGGTTGCAGTCGTCTCTGTCTTCTCTCTCAAGC
                      ____________________________________________________________
consensus             GCCGCGCTGCACTGCACCGCACCGCCGTGGTTGCAGTCGTCTCTGTCTTCTCTCTCAAGC