clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF027I07 | Sequence | 533 | 000151 (3) | emb|CDP12010.1| | 6e-65 | unnamed protein product [Coffea canephora] | 677 | 006882 (4) | dbj|BAF98573.1| | 7e-109 | alcohol dehydrogenase [Calystegia hederacea] |
JMFF051N01 | Sequence | 643 | 000151 (3) | emb|CDP12010.1| | 7e-88 | unnamed protein product [Coffea canephora] | 586 | 006882 (4) | emb|CAJ13708.1| | 1e-80 | alcohol dehydrogenase [Capsicum chinense] |
JMSF013C18 | Sequence | 469 | 000151 (3) | ref|XP_009773230.1| | 7e-58 | PREDICTED: alcohol dehydrogenase 3-like [Nicotiana sylvestris] | 725 | 006882 (4) | dbj|BAF98506.1| | 1e-107 | alcohol dehydrogenase [Calystegia soldanella] |
This contig is upended
. : . : . : . : . : . :
JMFF051N01+ AAGTGATAGATTGGTTGGCCGTTGATTGTAAATCTGNATTTCT
____________________________________________________________
consensus AAGTGATAGATTGGTTGGCCGTTGATTGTAAATCTGNATTTCT
. : . : . : . : . : . :
JMFF051N01+ GGTCGTGAAGCATCACCCCTCTGTCAGTGTTGATCCTGAGGAGATCACACATATTGCTCT
____________________________________________________________
consensus GGTCGTGAAGCATCACCCCTCTGTCAGTGTTGATCCTGAGGAGATCACACATATTGCTCT
. : . : . : . : . : . :
JMFF051N01+ CCTCTGATTGCAGTNGTCTACACTCTTTGCATTCCCCAGTGAAAACAGGTAGCACATGGT
JMSF013C18+ CCAGTGAAAACAGGTAGCACATGGT
JMFF027I07+ GTCTACACTCTTTGCATTCCCCAGTGAAAACAGGTAGCACATGGT
____________________________________________________________
consensus CCTCTGATTGCAGTNGTCTACACTCTTTGCATTCCCCAGTGAAAACAGGTAGCACATGGT
. : . : . : . : . : . :
JMFF051N01+ CCCCTGGTGCTAGTTCTGTCACTCCCTCTCCTACACTCTCCACAATCCCTGCGGCCTCGT
JMSF013C18+ CCCCTGGTGCTAGTTCTGTCACTCCCTCTCCTACACTCTCCACAATCCCTGCGGCCTCGT
JMFF027I07+ CCCCTGGTGCTAGTTCTGTCACTCCCTCTCCTACACTCTCCACAATCCCTGCGGCCTCGT
____________________________________________________________
consensus CCCCTGGTGCTAGTTCTGTCACTCCCTCTCCTACACTCTCCACAATCCCTGCGGCCTCGT
. : . : . : . : . : . :
JMFF051N01+ GTCCTAGAATACGAGGAAAGACAGGATTTTGCCCCTTGGCTTCCCAGAAGTAGACATCAG
JMSF013C18+ GTCCTAGAATACGAGGAAAGACAGGATTTTGCCCCTTGGCTTCCCAGAAGTAGACATCAG
JMFF027I07+ GTCCTAGAATACGAGGAAAGACAGGATTTTGCCCCTTGGCTTCCCAGAAGTAGACATCAG
____________________________________________________________
consensus GTCCTAGAATACGAGGAAAGACAGGATTTTGCCCCTTGGCTTCCCAGAAGTAGACATCAG
. : . : . : . : . : . :
JMFF051N01+ TGTGGCAAAGAGAAGTGAAAAGAATCTTGATTCGGACTTCCATTTTCTGCGGCGGAGCGA
JMSF013C18+ TGTGGCAAAGAGAAGTGAAAAGAATCTTGATTCGGACTTCCATTTTCTGCGGCGGAGCGA
JMFF027I07+ TGTGGCAAAGAGAAGTGAAAAGAATCTTGATTCGGACTTCCATTTTCTGCGGCGGAGCGA
____________________________________________________________
consensus TGTGGCAAAGAGAAGTGAAAAGAATCTTGATTCGGACTTCCATTTTCTGCGGCGGAGCGA
. : . : . : . : . : . :
JMFF051N01+ CCTCCACTTCCTCTATCACCAGCGGCTTCCCTGCTTCCCATGCCACCGCAGCTTTGCATC
JMSF013C18+ CCTCCACTTCCTCTATCACCAGCGGCTTCCCTGCTTCCCATGCCACCGCAGCTTTGCATC
JMFF027I07+ CCTCCACTTCCTCTATCACCAGCGGCTTCCCTGCTTCCCATGCCACCGCAGCTTTGCATC
____________________________________________________________
consensus CCTCCACTTCCTCTATCACCAGCGGCTTCCCTGCTTCCCATGCCACCGCAGCTTTGCATC
. : . : . : . : . : . :
JMFF051N01+ GAATGACTTGCCCAGCAGTGCATGCCATTTTTGTTGTCTGAAAATATGTGTTAGTTCGAA
JMSF013C18+ GAATGACTTGCCCAGCAGTGCATGCCATTTTTGTTGTCTGAAAATATGTGTTAGTTCGAA
JMFF027I07+ GAATGACTTGCCCAGCAGTGCATGCCATTTTTGTTGTCTGAAAATATGTGTTAGTTCGAA
____________________________________________________________
consensus GAATGACTTGCCCAGCAGTGCATGCCATTTTTGTTGTCTGAAAATATGTGTTAGTTCGAA
. : . : . : . : . : . :
JMFF051N01+ CTGAATAGGAATGTTGATGATGTGGGTTGGTTTGAAGGTGAAGGTTGGGCATTTATAGTT
JMSF013C18+ CTGAATAGGAATGTTGATGATGTGGGTTGGTTTGAAGGTGAAGGTTGGGCATTTATAGTT
JMFF027I07+ CTGAATAGGAATGTTGATGATGTGGGTTGGTTTGAAGGTGAAGGTTGGGCATTTATAGTT
____________________________________________________________
consensus CTGAATAGGAATGTTGATGATGTGGGTTGGTTTGAAGGTGAAGGTTGGGCATTTATAGTT
. : . : . : . : . : . :
JMFF051N01+ GCAGAGGAAACAAAATTTAAAAACAATTAAGGGAAGTCATAAGTGGTTTTGCATACCAGG
JMSF013C18+ GCAGAGGAAACAAAATTTAAAAACAATTAAGGGAAGTCATAAGTGGTTTTGCATACCAGG
JMFF027I07+ GCAGAGGAAACAAAATTTAAAAACAATTAAGGGAAGTCATAAGTGGTTTTGCATACCAGG
____________________________________________________________
consensus GCAGAGGAAACAAAATTTAAAAACAATTAAGGGAAGTCATAAGTGGTTTTGCATACCAGG
. : . : . : . : . : . :
JMFF051N01+ GGTTTGTGTGTAGGCGGAACTACGGAAGCATCCTCATATGGGTTGTCAACAATTTAATAC
JMSF013C18+ GGTTTGTTAGTAGGCGGAACTA
JMFF027I07+ GGTTTGTTAGTAGGCGGAACTACGGAAGCATCCTCATATGGGTTGTCAACAATTTAATAC
____________________________________________________________
consensus GGTTTGTTAGTAGGCGGAACTACGGAAGCATCCTCATATGGGTTGTCAACAATTTAATAC