Contig 000149:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027A09Sequence246000149 (2)704013865 (4)ref|XP_002281244.1|275PREDICTED: uncharacterized protein LOC100267519 [Vitis vinifera]
JMSF036I10Sequence606000149 (2)gb|KDP21903.1|1e-54hypothetical protein JCGZ_03041 [Jatropha curcas]639013865 (4)ref|XP_009623913.1|253PREDICTED: uncharacterized protein LOC104115047 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF036I10+                               TTTGCCACATAACAAAACAACCCTTTTGTGAAACACTACT
                      ____________________________________________________________
consensus                                 TTTGCCACATAACAAAACAACCCTTTTGTGAAACACTACT
 
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JMSF036I10+           GCCAGATCCAACAGGCGAACCAGTCGAGCCAAGCTCATCCACCACTGCCATTGCAACTTT
                      ____________________________________________________________
consensus             GCCAGATCCAACAGGCGAACCAGTCGAGCCAAGCTCATCCACCACTGCCATTGCAACTTT
 
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JMSF036I10+           TCCAGTAGCATACATGTTCTTTACCATCCCTTCCAGCTTCCGGCAGCCAGTCGCTGCCAT
                      ____________________________________________________________
consensus             TCCAGTAGCATACATGTTCTTTACCATCCCTTCCAGCTTCCGGCAGCCAGTCGCTGCCAT
 
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JMSF036I10+           GAAGTGTTGTATTATGTATTCTGCTGATGACGAGACTTGAGAAATAGGAAGTTTGGGATG
                      ____________________________________________________________
consensus             GAAGTGTTGTATTATGTATTCTGCTGATGACGAGACTTGAGAAATAGGAAGTTTGGGATG
 
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JMSF036I10+           GAAAGAAACAGGGAAGAGAGGGCAGCCAAGAACACTGAGAAGGATTCTGTGGTCAGATTT
                      ____________________________________________________________
consensus             GAAAGAAACAGGGAAGAGAGGGCAGCCAAGAACACTGAGAAGGATTCTGTGGTCAGATTT
 
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JMSF036I10+           CTTGTGGATAAAGAGCAGAGACGACAAGTGGGTTCTGAGCCAGTTTCTCCATGTCTGGGA
                      ____________________________________________________________
consensus             CTTGTGGATAAAGAGCAGAGACGACAAGTGGGTTCTGAGCCAGTTTCTCCATGTCTGGGA
 
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JMSF036I10+           TTTCTTCGAACAGTTGTTGGACAATTCCTCCATTTCTTCGCCATTCGGAACTTCAGCCAA
JMFF027A09+                                                                 AGCCAA
                      ____________________________________________________________
consensus             TTTCTTCGAACAGTTGTTGGACAATTCCTCCATTTCTTCGCCATTCGGAACTTCAGCCAA
 
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JMSF036I10+           TGGCGCCAGACGACTCATCTCTAACGTAAACTATATGTGATCCTAAGCTCCAATCCTCAC
JMFF027A09+           TGGCGCCAGACGACTCATCTCTAACGTAAACTATATGTGATCTTAAGCTCCAATCCTCAC
                      ____________________________________________________________
consensus             TGGCGCCAGACGACTCATCTCTAACGTAAACTATATGTGATCTTAAGCTCCAATCCTCAC
 
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JMSF036I10+           TTCCCCTCTCTTCTTCGTGGTGCTCATAATCTGCCCCCTCCCGCGTCTCCTTCTACTTCA
JMFF027A09+           TTCCCCTCTCTTCTTCGTGGTGCTCATAATCTGCCCCCTCCCGCGTCTCCTTCTACTTCA
                      ____________________________________________________________
consensus             TTCCCCTCTCTTCTTCGTGGTGCTCATAATCTGCCCCCTCCCGCGTCTCCTTCTACTTCA
 
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JMSF036I10+           CAATCTCATGAAAATGTTAGCAGAAGAGAGAGTGAGAGAGAGAGAGAGACAGACATTTAA
JMFF027A09+           CAATCTCATGAAAATGTTAGCAGAAGAGAGAGTGAGAGAGAGAGAGAGACAGACATTTAA
                      ____________________________________________________________
consensus             CAATCTCATGAAAATGTTAGCAGAAGAGAGAGTGAGAGAGAGAGAGAGACAGACATTTAA
 
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JMSF036I10+           AAGCAGCGGCGGGTGTAGCTTTACC                                   
JMFF027A09+           AAGCAGCGGCGGGTGTAGCTTTACCGCACGTACTTTGCCCGCGTGCGCTCACTTCTTTCC
                      ____________________________________________________________
consensus             AAGCAGCGGCGGGTGTAGCTTTACCGCACGTACTTTGCCCGCGTGCGCTCACTTCTTTCC