Contig 000142:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF026J08Sequence447000142 (2)ref|XP_010677456.1|2e-07PREDICTED: cadmium-induced protein AS8 [Beta vulgaris subsp. vulgaris]505009705 (2)
JMSF044M18Sequence674000142 (2)ref|XP_002264384.1|2e-18PREDICTED: cadmium-induced protein AS8 isoform X2 [Vitis vinifera] ref|XP_010648710009705 (2)ref|XP_002264384.1|2e-18PREDICTED: cadmium-induced protein AS8 isoform X2 [Vitis vinifera] ref|XP_010648

Alignment

This contig is upended


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JMSF044M18+                                           ATTNTTCAAAGAATNTTTNGNTGTTAAG
                      ____________________________________________________________
consensus                                             ATTNTTCAAAGAATNTTTNGNTGTTAAG
 
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JMSF044M18+           GTAGAAAATGCCCNTCNTATTTTNTGNTGCAAACCAGAAATNTGNGGATNCAAGTTAAAC
                      ____________________________________________________________
consensus             GTAGAAAATGCCCNTCNTATTTTNTGNTGCAAACCAGAAATNTGNGGATNCAAGTTAAAC
 
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JMSF044M18+           CAACCNTNCNTGCCATCATTTNGGATGNTCAGTAGACCANTCGATCGAGCAACATNTAAA
                      ____________________________________________________________
consensus             CAACCNTNCNTGCCATCATTTNGGATGNTCAGTAGACCANTCGATCGAGCAACATNTAAA
 
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JMSF044M18+           GCACCANTTNTNGTAGCCATGAATGCATTTAAAGGAGCTGTGAAGAAGTCATTGGCAGGA
                      ____________________________________________________________
consensus             GCACCANTTNTNGTAGCCATGAATGCATTTAAAGGAGCTGTGAAGAAGTCATTGGCAGGA
 
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JMSF044M18+           AGCCCAATCCNTAATCCAGCCAGAGTGATTCCCACANTAAACCCGGCACCGCAGCNTGCT
                      ____________________________________________________________
consensus             AGCCCAATCCNTAATCCAGCCAGAGTGATTCCCACANTAAACCCGGCACCGCAGCNTGCT
 
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JMSF044M18+           CCAACATAACCAATCACCTCAGGACCAAAACCAGGTCCCCATCCCACTCCACACCCAATT
JMFF026J08+                                            GGTCCCCATCCCACTCCACACCCAATT
                      ____________________________________________________________
consensus             CCAACATAACCAATCACCTCAGGACCAAAACCAGGTCCCCATCCCACTCCACACCCAATT
 
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JMSF044M18+           CCAATTCCAATCCCCCAGAAGGCTCCATAAGTTGGGTGCACTGGATTCCACCTTTCATAT
JMFF026J08+           CCAATTCCAATCCCCCAGAAGGCTCCATAAGTTGGGTGCACTGGATTCCACCTTTCATAT
                      ____________________________________________________________
consensus             CCAATTCCAATCCCCCAGAAGGCTCCATAAGTTGGGTGCACTGGATTCCACCTTTCATAT
 
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JMSF044M18+           CTACGGAACACGCCCTTTATGATCATTTCTTATAGCACCTAAAGCCACACTTCATTACAT
JMFF026J08+           CTACGGAACACGCCCTTTATGATCATTTNTTATAGCACCTAAAGCCACACTTCATTACAT
                      ____________________________________________________________
consensus             CTACGGAACACGCCCTTTATGATCATTTCTTATAGCACCTAAAGCCACACTTCATTACAT
 
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JMSF044M18+           TTACACACATAAGCAAAGGTATCGACTTGCCAAACACAGCAGACATGGAACTAAGTTTCA
JMFF026J08+           TTACACACATAAGCAAAGGTATCGACTTGCCAAACACAGCAGACATGGAACTAAGTTTCA
                      ____________________________________________________________
consensus             TTACACACATAAGCAAAGGTATCGACTTGCCAAACACAGCAGACATGGAACTAAGTTTCA
 
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JMSF044M18+           TACATGCCATTCATAGACGATATACTGTTCAGATTAATTTCGGAAAATTTGATGAAATTG
JMFF026J08+           TACATGCCATTCATAGACGATATACTGTTCAGATTAATTTCGGAAAATTTGATGAAATTG
                      ____________________________________________________________
consensus             TACATGCCATTCATAGACGATATACTGTTCAGATTAATTTCGGAAAATTTGATGAAATTG
 
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JMSF044M18+           CTGGCATTTTAAGAGTATGGAACTTCGCTTCTATGTGTACATGGAAAACAAGAAGATATG
JMFF026J08+           CTGGCATTTTAAGAGTATGGAACTTCGCTTCTATGTGTACATGGAAAACAAGAAGATATG
                      ____________________________________________________________
consensus             CTGGCATTTTAAGAGTATGGAACTTCGCTTCTATGTGTACATGGAAAACAAGAAGATATG
 
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JMSF044M18+           ATCATTTACCGTGAAATGGCGAATGGAAACTGAGGACTCACTGTT               
JMFF026J08+           ATCATTTACCGTGAAATGGCGAATGGAAACTGAGGACTCACTGTTGGACTTAATCATCCT
                      ____________________________________________________________
consensus             ATCATTTACCGTGAAATGGCGAATGGAAACTGAGGACTCACTGTTGGACTTAATCATCCT
 
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JMFF026J08+           TTGGGGAGAGTATGTAAAGGGAGCTTTTGAAACCACTCATTTTGGAGCCAAGGAAGACCC
                      ____________________________________________________________
consensus             TTGGGGAGAGTATGTAAAGGGAGCTTTTGAAACCACTCATTTTGGAGCCAAGGAAGACCC