| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002L07 | Sequence | 551 | 000134 (10) | ref|XP_009802140.1| | 3e-105 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | 772 | 010922 (15) | ref|XP_009591299.1| | 1e-110 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
| JMFF013O15 | Sequence | 593 | 000134 (10) | ref|XP_009802140.1| | 2e-86 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | 705 | 010922 (15) | ref|XP_009591299.1| | 9e-94 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
| JMFF025K01 | Sequence | 549 | 000134 (10) | ref|XP_009802140.1| | 3e-104 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | 725 | 010922 (15) | ref|XP_009591299.1| | 3e-122 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
| JMFF031G10 | Sequence | 520 | 000134 (10) | ref|XP_009802140.1| | 1e-96 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | |||||
| JMFF034M02 | Sequence | 548 | 000134 (10) | ref|XP_009592455.1| | 9e-83 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia | 767 | 010922 (15) | ref|XP_009591299.1| | 5e-113 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
| JMFF036D03 | Sequence | 524 | 000134 (10) | ref|XP_009592455.1| | 2e-83 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like, partial [Nicotia | 756 | 010922 (15) | ref|XP_009591299.1| | 2e-95 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
| JMFF049D04 | Sequence | 613 | 000134 (10) | ref|XP_009802140.1| | 4e-120 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | 640 | 010922 (15) | gb|KDO65843.1| | 7e-59 | hypothetical protein CISIN_1g0115532mg, partial [Citrus sinensis] gb|KDO65846.1| |
| JMFN037L10 | Sequence | 279 | 000134 (10) | ref|XP_009802140.1| | 4e-31 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | |||||
| JMFS005G09 | Sequence | 579 | 000134 (10) | ref|XP_009802140.1| | 3e-116 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | |||||
| JMSF053M11 | Sequence | 659 | 000134 (10) | ref|XP_009802140.1| | 3e-120 | PREDICTED: 26S proteasome regulatory subunit 4 homolog A-like [Nicotiana sylves | 877 | 010922 (15) | ref|XP_009591299.1| | 1e-139 | PREDICTED: 26S protease regulatory subunit 4 homolog [Nicotiana tomentosiformis |
This contig is upended
. : . : . : . : . : . :
JMSF053M11+ TCCTGTATCTGTGCATCTA
JMFS005G09+ CATCTA
JMFF049D04+ TGTGCATCTA
____________________________________________________________
consensus TCCTGTATCTGTGCATCTA
. : . : . : . : . : . :
JMSF053M11+ ATCCACCAATATCAGCATAAGATTCCAAAGGAGCCTTTTCAACCTTCATTACAGATACCA
JMFS005G09+ ATCCACCAATATCAGCATAAGATTCCAAAGGAGCCTTTTCAACCTTCATTACAGATACCA
JMFF013O15+ CCAATATCAGCATAAGATTCCAAAGGAGCCTTTTCAACCTTCATTACAGATACCA
JMFF002L07+ TTCATTACAGATACCA
JMFF049D04+ ATCCACCAATATCAGCATAAGATTCCAAAGGAGCCTTTTCAACCTTCATTACAGATACCA
JMFF025K01+ TTACAGATACCA
____________________________________________________________
consensus ATCCACCAATATCAGCATAAGATTCCAAAGGAGCCTTTTCAACCTTCATTACAGATACCA
. : . : . : . : . : . :
JMSF053M11+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFS005G09+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFF034M02+ GTGCATCAAAA
JMFF013O15+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFF002L07+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFF049D04+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFF031G10+ TGAAGAAGTCCAACTACAGACAAAACCTTATTGTGCATCAAAA
JMFF025K01+ TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
____________________________________________________________
consensus TGGGATCAACATCATCTTGAAGAAGCCCAACTACAGACAAAACCTTATTGTGCATCAAAA
. : . : . : . : . : . :
JMSF053M11+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFS005G09+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF034M02+ TTGCACATCCAGGCTCCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF013O15+ TTGCACATCCAGGCTTCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF002L07+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF049D04+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF031G10+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF036D03+ GC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
JMFF025K01+ TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
____________________________________________________________
consensus TTGCACATCCAGGC-TCGAGCTGATCCTTATCGACGAACGATAAGATAGAGACATAGTAC
. : . : . : . : . : . :
JMSF053M11+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFS005G09+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFF034M02+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTACAGATTA
JMFF013O15+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFF002L07+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFF049D04+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFF031G10+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
JMFF036D03+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTACAGATTA
JMFF025K01+ TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
____________________________________________________________
consensus TCGGGCCCCACGGAAGAAGAAACAATGGCGTGGTTCTCGTCAATCAGCTCCTCCAGATTA
. : . : . : . : . : . :
JMSF053M11+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFS005G09+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF034M02+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF013O15+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF002L07+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF049D04+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF031G10+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF036D03+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
JMFF025K01+ CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
____________________________________________________________
consensus CCAACGCTCATCGGCGTTCCTCGGAGATCATCGACCTTGGATCGATCCTCTTCGGTCTTC
. : . : . : . : . : . :
JMSF053M11+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFS005G09+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF034M02+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF013O15+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF002L07+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF049D04+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF031G10+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF036D03+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFN037L10+ CTGGGGCTTCAATCGCTCCTAGTTGGCCACAAACTCCTCCTCCATCAACAGATAG
JMFF025K01+ TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
____________________________________________________________
consensus TCCTCCTGGGGCTTCAATCGCTCCTGATTGGCCACAAACTCCTCCTCCATCAACAGATAG
. : . : . : . : . : . :
JMSF053M11+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFS005G09+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF034M02+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF013O15+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF002L07+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF049D04+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF031G10+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFF036D03+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
JMFN037L10+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCAGCTTGGTGAGCGGAGTGACAGT
JMFF025K01+ TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
____________________________________________________________
consensus TCCTTGATGCGCTCCATCTTCAGGAGCCGGAGCTTGCA-CTTGGTGAGCGGAGTGACAGT
. : . : . : . : . : . :
JMSF053M11+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFS005G09+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF034M02+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF013O15+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGAGTCCGACGCGGGC
JMFF002L07+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF049D04+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF031G10+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF036D03+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFN037L10+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
JMFF025K01+ CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
____________________________________________________________
consensus CGGAAGCCGAGCCGCCGCCTCGGAGCCTTTCTGCTTCCTTTGTTTGCGTCCGACGCGGGC
. : . : . : . : . : . :
JMSF053M11+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFS005G09+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF034M02+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF013O15+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF002L07+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF049D04+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF031G10+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFF036D03+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
JMFN037L10+ AGGTGGCGCCACCGGCTCGAACTTCTTCTCCTTGTTGTCATCGTTTTTTCCGATCTCCGG
JMFF025K01+ AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
____________________________________________________________
consensus AGGTGGCGCCGCCGGCTCGAACTTCTTCTCCTTCTTGTCATCG-TTTTTCCGATCTCCGG
. : . : . : . : . : . :
JMSF053M11+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTC
JMFS005G09+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGAC
JMFF034M02+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTC
JMFF013O15+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGATGT
JMFF002L07+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGAT
JMFF049D04+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGATGT
JMFF031G10+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGATGT
JMFF036D03+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTC
JMFN037L10+ GAATCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATT
JMFF025K01+ GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGATGT
____________________________________________________________
consensus GAAGCTGCCTGTTCAGACCTCCGGGAGTTCCCTGACCCATGATTCTTCTTCTACAGATGT